Array 1 5590929-5594762 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWKV01000001.1 Mycobacterium persicum strain 8MK PseudoContig_NC_022663.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 5590929 38 100.0 34 ...................................... TGATTGAGCGCTGCGGTGCAGCAGAACTCAAGTC 5591001 38 97.4 35 T..................................... GTCCTGGGTGAACGGCGCCCCCGGCTGACCGGCAA 5591074 38 100.0 37 ...................................... CCGCACAACCCCGAAGCGGTGGGACATACCGGAGATG 5591149 38 100.0 32 ...................................... CAGACGTCGCCGGTAGCGACGACCTGCCGGGC 5591219 38 100.0 36 ...................................... GAGGGAAGTAAGGCGGGGTCGGCGGGGGCTGTTATT 5591293 38 100.0 36 ...................................... TGTAAGGACATCAGGGTTTAGCGGCCGAACAGTCGC 5591367 38 100.0 35 ...................................... ATGTGCCTCAGCGGTTTTCGTGACCACGTCCTGCA 5591440 38 97.4 36 C..................................... CGTTCGTTGCCCGACTCATGCCGACAGAACTCCCCC 5591514 38 100.0 35 ...................................... ATCGTGGAGTTGTTTGGCTTGGTCGAGGCGCGAGT 5591587 38 100.0 36 ...................................... CTCCGCAGACAAGCCCAACCGGGTCAGGTGGTGCAC 5591661 38 97.4 36 C..................................... CTTGAGCTGATTACTATGTATGGGTTGACGGTCACG 5591735 38 100.0 36 ...................................... AAAGACAAGTACTCCGGCCCTGAGAACGCCTACAAG 5591809 38 92.1 32 A...................................CA GCGATGATCGTTGTCACGTATCTCGTGCCAGC 5591879 38 97.4 35 A..................................... CCATCCGTCGGGGTGGGGCGGGTAGTGGTCACAGT 5591952 38 97.4 36 C..................................... CCCAATGGACGACGAGCTGATCGGCGCCACCGTGCG 5592026 38 100.0 36 ...................................... CCATGTTGCCCACTCCTCATCTGTGAGTGGCGTTGT 5592100 38 100.0 36 ...................................... TGGTGGAGCTATACAGGTCGGCGTCGAAGTGCACCA 5592174 38 100.0 37 ...................................... ACGGCAAGGATGATGCGTTGTTGGCTGTGTTCGCTCA 5592249 38 100.0 36 ...................................... TCCCGCACCACGTCGGTGACGACGGTGATCATGCCG 5592323 38 97.4 34 A..................................... TGACCACGGGAAACATCACACTTCCCATGCCCGA 5592395 38 97.4 36 A..................................... GTTGCAGGCGGTGGTGGGTTGCACACCGGGGGCCGG 5592469 38 100.0 33 ...................................... ATCTTGGTTTGCTTCCGCTGGGGGCTTTTGGCA 5592540 38 97.4 36 A..................................... AATACTGCGCCGCCGCGGTACACCACGACCACCACG 5592614 38 97.4 35 A..................................... CCACAATGACCGGGGGGACTCCGGCGGCCATCGCG 5592687 38 97.4 35 A..................................... ATTTTGAACGTTGTCGAGCCCGCGTTGAGTCCAGT 5592760 38 100.0 34 ...................................... GCCTGGAAAAACCGCCTCGATGATCTGATCGACC 5592832 38 100.0 37 ...................................... GGCTCGGCTGTCCATTACGGCCAAGGTGCCCGACCCT 5592907 38 97.4 35 A..................................... AAGTTGCGCGCATCTGATCCAATGTGGTACGAGGA 5592980 38 97.4 35 C..................................... CCTACACCGATTTCCAGGCGCGATGGCAGTCAGGA 5593053 38 97.4 34 T..................................... TTCGGAAGTTGATGAGGTCACTACCCTAACAAAG 5593125 38 97.4 23 C..................................... CACGGCGGAGCCCACGGCGGAGT Deletion [5593186] 5593186 38 97.4 37 T..................................... GCTCCGGTGGACAGACGTCAGAGATGGGGCCGCGCCC 5593261 38 100.0 36 ...................................... CGGCCCCGCGGATTCGCACCCCACTCGGGTGGCGGT 5593335 38 100.0 34 ...................................... CAGCCCGGAGCTATAAGGCTTATACGATAACGTC 5593407 38 100.0 35 ...................................... AGCGGTGAGACACGCGACGGCTGGAATGTAGCCGA 5593480 38 100.0 35 ...................................... TTTGGCCCTGCACATCACCCGGACCATGGACCAGG 5593553 38 97.4 37 A..................................... AGGTTGAGCCATGTAGCAGTCCCGCTCCACCACCGCC 5593628 38 100.0 34 ...................................... CGCAGGAGTGGAAGGACGGGCGGCGTTGGTTGGC 5593700 38 100.0 35 ...................................... CGCAAGCACCGCCTAGTCGCCACTACGATGCCCGT 5593773 38 97.4 35 .....T................................ AACAACTCTGGGACGTACAGCGTGCCAGGATGGAT 5593846 38 97.4 36 .T.................................... CTTGCTATCGCGCCGGGCTCCTATGAGCTGCGCCGA 5593920 38 97.4 35 C..................................... TGTCAGGGTGCCACTTATGGCGAACCCCGTCTCGT 5593993 38 100.0 36 ...................................... AACGGAATAACGTCACGAATCACATCGTCGATCTGC 5594067 38 100.0 35 ...................................... CTAGCTTTGGAGCCGCAGCGGCGCCGCGCGGTGCT 5594140 38 94.7 35 C.......................T............. AGCAACGACTCGTCGACCAATGGGACGCCCCGTCG 5594213 38 97.4 37 C..................................... TCCGCCGGTAGGTCCTCTATAAGCTCACCACCCAAGC 5594288 38 100.0 33 ...................................... CTGAACCATTACAACTACGAGCGCCCGCATGCG 5594359 38 100.0 33 ...................................... ACCGACGCGAGTAGCCGACCCGTCGAGTTGCCT 5594430 38 100.0 37 ...................................... TGCCGGTGCTTGCCGACCCACGCAAGATCCTCGTCGC 5594505 38 100.0 35 ...................................... CTTTCAGGCGGCGATGCGGAGTAGGTCGATGATGG 5594578 38 97.4 35 A..................................... TTTTGACCCGAGTGTCCAGCGATACCGCACACGGC 5594651 38 100.0 36 ...................................... ATCCGCGAAGCCGACCTGGCCACCACACCGACCCAC 5594725 38 86.8 0 C.....A..........T......T............T | ========== ====== ====== ====== ====================================== ===================================== ================== 53 38 98.5 35 GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC # Left flank : ACTTCAGGCGCTTCTTCTGGCACGGCACCTTCGCGGCGATCTGACGCATTATTTCCCATATAGAACGACAGGGCGGTGAGATGGAGATACTAGTGGCCTATGACATCAGCACGGCGTCACCTGACGGGGAGCGTCGTCTTCGCGGGATAGCGAAGGTTTGCGAGGGGTACGGTCAGCGTGTCCAAAAGTCAGTTTTCGAATGTCAGCTGGAAATGCGCGAAGTCCGCCTGCTGATAAATGACGTTGAGAAGGTTATCGACCCGAAATCCGATCGGGTAGCCGTCTATAGACTGCGTGAGCCGTACCGTCGCTACGTGGTGACCCTTGGCCGTGGGCCAGAGGTCGACTGGCGGCACCCAGTCATTTTGTGAAGGGGCGGACCCGGGTTAGACGTGCGACCCGTAGTAGATCCGCCCGAGGATTCGGGCTCCCAAAGCGCAGAACGGTTTGTTGATAAGTTGATGATTGTCGCGGTCGCCGAAAAATAGCTGTTCGCGAAG # Right flank : TCGACCCCACGGCTCACACCATCGACAAGGTTGTCAAGCGTTGGATGACTTTCTGCGGCGCCGATGATTCGAAAGATCAGGCTCGACAAATGACCCTAGTGGTGTGTCACGCAAATAGTTAACTGAATGTTCGGTATTCTGGATCGGTGAGCGCCTCACCTGCAGTTGCTTTGGCCATGTCGGTTGGCGAGCGTGAAACGTTGGAGAGGTTGGCGCGGTCTGATTCGGTGCCGCATCGGCAGGTGATGCGCGCGCGTGCGTTGCTGATGGCTGCTGACGGCGTGGCGAACACCCGCATCGCTGAGGAGGTGGGGGTGACACCGGTGACGGTGCGTAGCTGGCGCAAAAGGTTCAGCGAGGACGGGCTGGCCAAGCTGGGACAGGTACGTAGGGGACGCGGCCGCAAAGCCACGATCTCAGACGCGCAGGTCGCTGAGATCGCGCGATTGACCACCGAGGAGACCCCGCCCGGCCACACGCATTGGTCATGCCGCACGATG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //