Array 1 327357-335841 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP017459.1 Candidatus Endomicrobium trichonymphae strain Rs-D17 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 327357 32 100.0 34 ................................ GTATGTTGTGAGCGTTCCGCCGTTCACTGCATGT 327423 32 100.0 34 ................................ TTTTTGGGATCGGCCTGATTGCGGTACAGTGGTT 327489 32 100.0 35 ................................ TTACTGAAGCCCAAAACTTCGAGCAGAAAATGCAG 327556 32 100.0 34 ................................ CGAAATAGGTTATCGTACAAATAATGAGCAAATT 327622 32 100.0 34 ................................ GAAGTATGCTAGTCTTGGTAGTTCAATGTTCGGA 327688 32 100.0 34 ................................ CATCATAGTGCTTGTGAGTGTTTGCTTTGTTTTT 327754 32 100.0 35 ................................ AGTATTTTATATCTATTCCGCCCTGTGCTTACGGT 327821 32 100.0 34 ................................ TTTAGCTTCGCAGGACTATGATTTTGACGACGAC 327887 32 100.0 34 ................................ CACTTATCAGGGCAATATATAACAGTTGCGGCAT 327953 32 100.0 33 ................................ CAGCTGAACGAAAGATATACACTAAGGTTCAAC 328018 32 100.0 34 ................................ TTGAGAATGTTGACTAAATTTCGTGGGTTATCTG 328084 32 100.0 34 ................................ GGAAGCCATAATAGGTAGAGTTGTGGGTGCGGTA 328150 32 100.0 34 ................................ CTCAAAAGACTGCTTGAGAGCGGAAACGTTTCTG 328216 32 100.0 32 ................................ TAATACATTCGTATCCTACTCCGTTGGCTAAA 328280 32 100.0 35 ................................ CTCCTGCTAAACCTCCCAACATCCCGCCTCCTCCG 328347 32 100.0 34 ................................ GGAACGCAAACGCACGCAAGAAAAGAACTTGACG 328413 32 100.0 35 ................................ ACAACAGACTTGAGGATATTTACCCAACAATGTTT 328480 32 100.0 34 ................................ ATGTTATGGTCTGCGATTTTGGCTTTAAATGCTT 328546 32 100.0 34 ................................ CAGTTCTCTACAGGCAACATGTGATTTGCCTCAT 328612 32 100.0 34 ................................ CTGTTGCATAACTGCACCACAATACCTGCGTAAT 328678 32 100.0 33 ................................ GTTTCTGTAGATGTGTTTCGCTTTTTCAAATGT 328743 32 100.0 35 ................................ CTTTCAGAATAATCAGGGATATTTACTATCAAAAA 328810 32 100.0 34 ................................ AAAATGTTATAATAAGACAAGGCACAGACACTTC 328876 32 100.0 34 ................................ CGTCTGTTTGAGGCAATATGCCCAGTTCTTTCTC 328942 32 100.0 34 ................................ ATTAGTTTCTAAATCTTTCTGCAGTGCTTCAAAT 329008 32 100.0 33 ................................ CGATTGGAAAGATACAGCTCTGGACTTTATAGG 329073 32 100.0 33 ................................ GTCCCATTTCTCCTGCCCGCCCTCGTAGCCTTT 329138 32 100.0 34 ................................ CTGCAAAGCTGTAAACACAGAAGCCAAATGGGCA 329204 32 100.0 34 ................................ TTCATATCCTTCTTTTGGTGCAATAAAGAATTGC 329270 32 100.0 34 ................................ CATCTCTAGTGCAAACAGTGCGTTTTCGTTTACC 329336 32 100.0 34 ................................ TACAGCTTTCTGATACAAAGCATTTATAGACTGC 329402 32 100.0 34 ................................ CCTAAACAACACTTCGTTTCTTTTCATTCTCTTT 329468 32 100.0 34 ................................ CCTCTTCAGCTGTATTTTCAAAATCAAACAATTG 329534 32 100.0 34 ................................ TATTTGCCTGCTTTCAGCGTAAGTAATAGAAGGA 329600 32 100.0 34 ................................ CAATACAGATACATCCGTACCTTTCTCAAATCTC 329666 32 100.0 33 ................................ TTACATAATCTGCGTAAGCTAACAGCCTGTAAT 329731 32 100.0 35 ................................ TTGACAAATAAATAATAATATGCTTATGTGGTGTA 329798 32 100.0 34 ................................ TAAATATTCCGCATACATTTCGTAATAATCGTTA 329864 32 100.0 34 ................................ CAATAGTATCTCCATCCTCGCTCAATCCCATCTT 329930 32 100.0 35 ................................ CTGTGCTCTGAACATTTTGCCATCTTCTCTCTCTT 329997 32 100.0 34 ................................ AGCTATAAAATTATATAACCGCTGAACTCTTCCA 330063 32 100.0 33 ................................ AACAGTGTTTGTATGATTTCTCAAAATCTTAAA 330128 32 100.0 34 ................................ AATCCATTGGTCTCTATCCAGTATAGGTTTATTA 330194 32 100.0 35 ................................ CGCACGTAGCTTCGGCAAATGCGATTTTAGGTGTT 330261 32 100.0 34 ................................ TTTAAAGGCATTAAACTTGTCAAATTTTGACATA 330327 32 100.0 34 ................................ GCGAGTGCTTTTCCAACCGTGCGAGAAAAGATTA 330393 32 100.0 34 ................................ CTGCTGAATCTGAAGCAACGTATCTAAATAATAA 330459 32 100.0 34 ................................ TCGTGGCAGCCCCATTTCCTCATTTACTTCTGCG 330525 32 100.0 33 ................................ GCGCCCCGTGTGGGCGCGTGAATTGAAATTTTC 330590 32 100.0 34 ................................ CTCTATCAAGTGGTGCATATAACGCATACATTTG 330656 32 100.0 35 ................................ TGCTCTTTCTCTTGCAGTTCAGCTTGTTTTATTAT 330723 32 100.0 34 ................................ TTTAATGAGTTTATGTTTTAGTAAAAGTAGAAGC 330789 32 100.0 35 ................................ TATAATATGAGTGTTCGCGGCGTTCCACATCAACA 330856 32 100.0 34 ................................ AGAATGCAGTTTAATGTATTGTGTGTCCGTTCCT 330922 32 100.0 34 ................................ AGGTACGGGAGGCAAAAATGACGCGGGAAGAGTA 330988 32 100.0 35 ................................ TGCTTTAAACCTTAATTTCAGCACTGATAAAAGGA 331055 32 100.0 33 ................................ CGTTATCTCCATATACAGGTATTCAAATATTAA 331120 32 100.0 35 ................................ AATCTTGAAAAGCCCTGTAAGATTAGATATGTAAA 331187 32 100.0 35 ................................ TTGACAAAATTGCCGACTTTTCTGATAAATTTCGC 331254 32 100.0 35 ................................ AGGATTTTGTTTCCATTGGTGAAGACCTTTCAGAA 331321 32 100.0 34 ................................ AGCCAATCGGCTGTGAAATTATTGTACCGCAAGA 331387 32 100.0 35 ................................ CTGTAGAATCGGACGCAATAGCTTTCCACTGGACA 331454 32 100.0 34 ................................ GGATGTTATAACATACTTAACTATCAGAGAAAAG 331520 32 100.0 35 ................................ TCCTATATGGAAGTTATATCCTAAAGTGTTGCTGT 331587 32 100.0 33 ................................ AACGACAACAGAAAAGACAAGTTGACTTTTTTT 331652 32 100.0 34 ................................ CGCAAAAGTGATATTAACTGTTCCTCTTCCGCCA 331718 32 100.0 35 ................................ CTCTTGAATTTATTGTAAATTTAATCAGACGTAAT 331785 32 100.0 34 ................................ CAAATGCTTCAGGATTTCAACCCTTCGAATCCCT 331851 32 100.0 34 ................................ CCAGATCGCTTGATAGCCAAATGGCACATTATTA 331917 32 100.0 34 ................................ TATTATGCCTCGTACCGCATATCAGCAAGGTATC 331983 32 100.0 33 ................................ GATTAGGCACAAAGAAAAAATGTGTGTATACAT 332048 32 100.0 33 ................................ GCGTACGAGCGTGAGCAGGCTCGTTTGAACGAG 332113 32 100.0 34 ................................ AATAATGCTCCAGTACCTTGAGGAACATTTAAAT 332179 32 100.0 35 ................................ TTTCGTAGTGCGGAATAATCCGTGAACAGAATTCT 332246 32 100.0 35 ................................ AGGAGCAGATGGTGTGCCTACTTTCTGGTAAAGAA 332313 32 100.0 34 ................................ GTATTTGCCGATATTTTTCAATCAAGGTGCTGGC 332379 32 100.0 33 ................................ TACACCTAAACATCGTTCAGCCGCTTCCGCTTT 332444 32 100.0 35 ................................ ATATTGACAAGTGCGATTGTAATAATACATTGTGG 332511 32 100.0 34 ................................ ATTTAGTTTGGAAGGAAAATCCTGTAACTGGTGA 332577 32 100.0 34 ................................ CTTTCAGAATAATCAGGGATATTTACTATCAAAA 332643 32 100.0 34 ................................ TGGAGGAAATGTTCAGAGGGCGGTGTCCCCAAAT 332709 32 100.0 34 ................................ TTTTAAAAGTATCCATAAAGATATTCTGGAGGAT 332775 32 100.0 35 ................................ TTTAAAATAATCAGTGAATAACTGGTCCCCTTCTA 332842 32 100.0 34 ................................ TGATAAGCGTAAGAATTGGTATGTGAGAGAGAAT 332908 32 100.0 34 ................................ CTGACGGAAAACCGAAAGTAGACGGACAGATATG 332974 32 100.0 34 ................................ TGGTACCACGGATGAGCAGCGCCCGCAACAGAAA 333040 32 100.0 34 ................................ GCAGATGGAACCGTCGGACGCTGTCAATTTTGAG 333106 32 100.0 34 ................................ AGATAGATATGTCAAAATTTGACAAGTTTAATGC 333172 32 100.0 32 ................................ ATTCCCTGTGCCTGTAAGAAACTTCGTGCCAG 333236 32 100.0 34 ................................ AAGCCCTTGACAAATAAATAAAAATATGATTGTA 333302 32 100.0 34 ................................ ATTTATTTTCAGGTGCTTGTACCTCTGGTACCTT 333368 32 100.0 34 ................................ TGCAAAAAGGTTTTAACATATCCAAAACAAATTT 333434 32 100.0 35 ................................ CGTTACCCACTCAATATTCGAGTTAAATGCTACTT 333501 32 100.0 34 ................................ AGGCGCAATATTATTCCGCTGGCAACGTTGCAGA 333567 32 100.0 35 ................................ CGAAATAAAAAACAAAAGCACAGCGGAGGCAAAAA 333634 32 100.0 34 ................................ CGCTCAATTACAATTTAACGATTATAGATTTTCC 333700 32 100.0 33 ................................ GGAACGGTAAAAAAACGGTTCGTTTTCACCGTA 333765 32 100.0 34 ................................ AAACTGTGCAACACGCATTCCAGGGTAGCACTTC 333831 32 100.0 35 ................................ TTTGTATTGGAAATCTTTAGCTTTGCCTTCTTTAA 333898 32 100.0 35 ................................ TTATCGCCAGCGTCCACCAATGTTTTAACATCGCC 333965 32 100.0 34 ................................ AAATCCTGACATATCTAACTCCTCTTCCACTGAC 334031 32 100.0 33 ................................ AACTATGAATAGATATTCCGACGAATTGTTTGA 334096 32 100.0 36 ................................ CAGAAAAGAAGCCTTGATAATATCGTAGAAGGGCTT 334164 32 100.0 34 ................................ AACTGCCACACCGTATACACTGCGTATATAATCA 334230 32 100.0 34 ................................ TATTTTCGTAGTTGATATCGTGTTTCAGTTGATG 334296 32 100.0 34 ................................ GTTTGATTTTAGTAGATATGTTTCACCTGCCATT 334362 32 100.0 35 ................................ ATAATCTTTATCCTCGTTTGCCGTATGAAAATCCA 334429 32 100.0 34 ................................ TTAATCATAAGCATTTTAGGACATTTATTGAGAG 334495 32 100.0 34 ................................ CTTGTACCTTCAATTTCTGTGCAACGAGCGCCTC 334561 32 100.0 33 ................................ GATCCCGGTATCGAGCGACGGCAGAGCGCCTGT 334626 32 100.0 34 ................................ TATTTTCTAAGAAATGTTCCTGATTTTCTTTTCT 334692 32 100.0 34 ................................ AATGAATTCACGCAACTGCCGTTCGAATCGTATC 334758 32 100.0 33 ................................ AAATCCTCGTATGCTTTTGCTACTGTAATTACA 334823 32 100.0 34 ................................ CATTAAAAACAACTGTTTTATATACTCCTCTGAA 334889 32 100.0 34 ................................ ATTCCAATTAGTTTCCTTTATATTTGCCTCTGCC 334955 32 100.0 34 ................................ TAATATTAAGTGTACAGGATTTGCCCTGTTTATT 335021 32 100.0 34 ................................ TAATATTAAGTGTACAGGATTTGCCCTGTTTATT 335087 32 100.0 33 ................................ AAGTCCCCTTGACTTTTAAATAAAAATATGATT 335152 32 100.0 33 ................................ ATTGCCTACATCAATTATTATGCTGTTGTTGTG 335217 32 100.0 34 ................................ AGCGATGTTATGATCTCTATATACAGGTATTCCC 335283 32 100.0 34 ................................ AAATTAAGACTGTACAATTCGTTGAGGAGAGTAT 335349 32 100.0 34 ................................ AGACGGGACAGCAGATAGCCAATGTGCCAGACTT 335415 32 100.0 34 ................................ TGCTCTGAATACTCCGTGCTGGCTTAAAGGTGCA 335481 32 100.0 33 ................................ TGACAATTATCTACAGATTACGGGAGTTGACGG 335546 32 100.0 34 ................................ TCTCAGATACGCTTGAGAAAGGCAAAGAACTTCC 335612 32 100.0 35 ................................ TTGACGAAGTAATTGTTGATAAATTTGCTGTTGAA 335679 32 100.0 34 ................................ ACAAATTTGGCAGAGCTTTAGACTTACATTTGAA 335745 32 100.0 33 ................................ CAATCCCTGATTTACAAGGCTCTCTTCCAACTT 335810 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 129 32 100.0 34 GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT # Left flank : ATATCCGCCATTTATTTGGAAATAGGATTATATTATGTTGGTTTTGATAAGTTATGATATAAGTACTATTGATGCAGGAGGACAAAAGCGGTTAAGGAGGGTTTCTAAAGAATGCTTGGATTATGGACAGAGAGTTCAGTATTCGGTATTTGAATGTGAAGTTGACCCTACTCAATGGATTTTTTTAAAGGATAAATTATTGAATACTGTAAACTTAAAAAAAGACAGTATAAGGTTTTATATGCTTGGTTCAGATTGGAAAAGAAAAATAGAACATTATGGTTGTAAAAAACCTGTTGATTTACATGGAACGTTGATAATATAAGAGTTATAAAGGAGTATAACGGTGCGAATGGTATGTAATTGATTGTTGTTTATTGGCATCGCACATTGAAAAATGAATAGAAATTAAGAATATGTCAATGGTTTTGTAATAAAAATGGGTGATTCGCATAAATTGTGAAAAATGTGTTGAATTTTTAATTATTTTTTGTTTTGCT # Right flank : TTAAACCCATCAACGATATCTGTTATAGCTTCCTTCCTATCTTTAGATGTGCTATACTAAATTATTGAAAATTCAATTGATTTAGCGTTTTCTATTTTTAGTAAGCAGGCTTTATTAAATTTCGGAAGTATCTGTAATTTCAACTTCAAAAATGCCGCTCTGCTTCTTTTTATTGCCGGAGGCTTTCATAATTCCACACTCTACATTCCACGCTTCAGTTTGTTGTTTAACAGTTATATAATTGTCTGTAAGCAGCTTATTTTTTCCTGTTTTTACAGCCTTTCTTTTTGTGCCTATGTTTTTATTTAAAAAATCTTTTCTTTTTATAGAATCTATTTCAAATATATCTTTTGACCTGCTTTTTATTTCAATTGTAGGAACTTTGTTTCCAAATGTTGAAGCTTTCGTTTCCTGTCTGTAAGAATATCTGAAAATGTGAAATCTTGCAAACAAAATTTGTTTTACAAAATCGCATGTTTCTTTGTGGTGTTTTTCGGTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.80,-6.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA //