Array 1 12433-13194 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LAVQ01000004.1 Legionella pneumophila strain SZ2012006 Scaffold4_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=====================================	=====================================	==================
     12433	    37	 100.0	    36	.....................................	TCTTGAACAATTGCCACTTGAAAACCATCATCTACA 	
     12506	    37	 100.0	    34	.....................................	ATCCATGTGTCTTGCATCCTTGTAATACCAGCCG   	
     12577	    37	 100.0	    34	.....................................	GTAATGCAATTGACACATTGCCCGCATTCTTGAA   	
     12648	    37	 100.0	    36	.....................................	TTTCTCAGCAAAAAAGGCTTGTCTGTTTATCCTTAA 	
     12721	    37	 100.0	    36	.....................................	ACATCCCCCTTTTCCACTACTTCAAAAGATCTCAAC 	
     12794	    37	 100.0	    37	.....................................	GACAAGAAAGGCTCCTCTACTAAAACCCACAAAGTAT	
     12868	    37	 100.0	    36	.....................................	ATCCTAACCCACTCAACGGGATTAACTTTCTTTGAA 	
     12941	    37	 100.0	    37	.....................................	ACTTCCATTTCATCATCAAAATCTCGAATGCTAAAAG	
     13015	    37	 100.0	    34	.....................................	TGTATGTGAAAAGCGTTTTAAAAGCTTAAAGAAA   	
     13086	    37	 100.0	    35	.....................................	GTCGCATCGTTTTCATGGTCGTAGCCTGACTTCTT  	
     13158	    37	  81.1	     0	....A......C...........TT...T.A.....T	|                                    	
==========	======	======	======	=====================================	=====================================	==================
        11	    37	  98.3	    36	CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC	                                     	       

# Left flank :   TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCATATGGAATGCTTTCTGAATTGATTTTTGAAAAATCATGTACCCGAGGCTATATTATTACTGGTGAAAAAGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGCTTGAAATTTATGCTAAAATAAAGAAGATTTTTGACACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTAAAATCGTTATATGCTCGCTATTAATACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTCAAGTATTGCCTTTTTTTTCGAAAAATCAAGTCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT
# Right flank :  TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAACTCCATGGAGTTATTATTTTATATAATTAAACATGTCGTAACTCCATGAATGTGACACTTTCATGGAGTTACGACAGCCGTTATGTTTGCTTGTTTTTCATCTTATTTGCTTAATAATTAACTTGATAATTATTAAGTGCTTTTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAATTTTCAAAACCATGCCCAACACTGGATTGTCTTTTGTTTTGTACATCTCAACTGAATATAATACTAGTGAATTTATTTTATTAGATAATTATTTCAGTAAGTTCTAATATTCAGGACTAATTTCCCAAGAATATTAACCTCAGCAATATCACTCACTTTAATATCTGGCCAATTATCATTAAGCGTTAAAAGCTCGAATTGTGAGGATGTATAGGACAATTTTTTATATACACAGATAATTGCC

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:62.16%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,-0.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//