Array 1 153246-157833 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNOU01000057.1 Acinetobacter baumannii MRSN 3405 7000000210819500, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 153246 30 96.7 30 ............................A. TTCCGCAACTCGCTACTTCCCTGATGCAGA 153306 30 96.7 30 .............................G GAAGATTTGCTTATGGCGTTCTGGAAAGAA 153366 30 96.7 30 ............................A. TGCTTAGTAATGCGCAAAAACGGTCATCCA 153426 30 93.3 30 ............................AG CAGAAGAACGCAGAAAAGCGAGAAGCTTAA 153486 30 96.7 30 ............................A. CTTGAAAGGCTTGAGCTTAAAGCTTTTTAC 153546 30 96.7 30 .............................A CAGCTGGCCGCGTATATAACGGCTCAGTAT 153606 30 93.3 30 ............................AC AACTCGATGTTGGGTATGCAGAGAGCCTTG 153666 30 93.3 29 ............................AA CTTACACTTCTCAGCGTCAAACCATGCGT 153725 30 93.3 30 ............................GA TTACATCCACGAAAAGAGCTTTAATCAGGA 153785 30 96.7 30 .............................G GCAGAACTTTTCATGACGCTCATTCTCTAA 153845 30 96.7 30 ............................A. ACCTATCAACGTTAAACCAACGATTGCCAG 153905 30 93.3 30 ............................GA TGCAGAAGATGTTTTAGAACGTTATGACGA 153965 30 96.7 30 ............................A. TGGGATGTTATGAATATTCGACATTACCAA 154025 30 96.7 30 ............................A. CAAAATAGAGTTGGCCTTCCTGTTTGGCCT 154085 30 100.0 30 .............................. CAAACGCTTCAACCAGCCACGTCTTTGAAG 154145 30 96.7 30 .............................C TTCCGCCAAATTCTAGGAGGTTAACATGCT 154205 30 100.0 30 .............................. GTGCATACTTATTGCCGCCAGCAAGTAAAC 154265 30 96.7 28 .............................C CTTCGGGAGGTTTCTTTGGGGTGATCAT 154323 30 93.3 30 ............................AA GTTTCGGCCTAATGGATGCGGTCTTGAAAA 154383 30 93.3 30 ............................AA GGACTATCCGTCCCTTTGCCGTTTTTGTAC 154443 30 93.3 30 ............................AC CCTCGGGTGGTTTTTTATTGAGGTGATCAT 154503 30 93.3 30 ............................AG TGGCGCGTTCAAGCGTGCCATTGAAGCATA 154563 30 93.3 30 ............................CA GAAGTAAGTCTTGCAGATGCACGATCTAAA 154623 30 96.7 30 ............................A. CCGCCGATAAAACCCTTACCCGATACGCCC 154683 30 96.7 30 .............................C AGCTCCCGATTCAACATCCAACAACATGCT 154743 30 100.0 30 .............................. TGAAAGACTTGAACGTGGTCAAGTCCTCCT 154803 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 154863 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 154923 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 154983 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 155043 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 155103 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 155163 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 155223 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 155283 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 155343 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 155403 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 155463 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 155523 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 155583 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 155643 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 155703 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 155763 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 155823 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 155883 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 155943 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 156003 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 156063 30 100.0 29 .............................. GAAAAAAGCATCATATTGTTCGGGGCAGG 156122 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 156182 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 156242 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 156302 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 156362 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 156422 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 156482 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 156542 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 156602 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 156662 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 156722 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 156783 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 156843 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 156903 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 156963 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 157023 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 157083 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 157143 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 157203 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 157263 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 157324 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 157384 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 157444 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 157504 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 157564 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 157624 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 157684 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 157744 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 157804 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 77 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //