Array 1 33-1439 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSZQ01000017.1 Cephaloticoccus primus strain CAG34 contig_24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 33 28 100.0 32 ............................ TGCGCGCGTTTGATGAGGTCGTAGAGGTGGCC 93 28 100.0 32 ............................ AGAACTGGAAGTCGTGCGCGGTGCGTTGGTCT 153 28 100.0 32 ............................ ATTCGGGCTTTCTTTCTTCTGGCGCGGGCTGG 213 28 100.0 33 ............................ GTCCACGTGCCACTCTTCCACTCCCTGATCACT 274 28 100.0 32 ............................ GGCACATACGTCACTCGCGACCCCGTCCACGA 334 28 100.0 32 ............................ CTTGGTTTTAGTCGCCCGCCTGGTCTGTCAGG 394 28 100.0 32 ............................ TCGCCGACCTCGGAGACGACGACGGTGAAGAT 454 28 100.0 32 ............................ AAAGGCCAGATCCGCGACTTCCTCCCCGACCC 514 28 100.0 32 ............................ AGTCCCCGGCCGCCGCGACCGCTACGCGGCCA 574 28 100.0 32 ............................ CGCTGCCCCCGCGCACCACGGCCGTATAGCGC 634 28 100.0 32 ............................ CTTCGGAGCCCTGCGCCTGCGCCCACCGCTAG 694 28 100.0 32 ............................ CGATGATCTGGAAGAGCCACACGCTGGTCTCG 754 28 100.0 33 ............................ AGAGTCGCTGGCCAGGGGTGAAGGTGAGGCCGA 815 28 100.0 32 ............................ TGCTGGAGGGCACGGGCAAGCTGGCGGAGCAG 875 28 100.0 32 ............................ TTCTCCAGGCTGGCTTTGATGTACATGCAGAA 935 28 100.0 32 ............................ GGTACGCAGTGGATGGGCTGCGCTGCATAGAA 995 28 100.0 32 ............................ TCCCAGTCGTCATCAGCGGCGGCTTGGGCGGC 1055 28 100.0 32 ............................ AGCGCCATGACCTCGGCGAGCGTGGCCTGCTT 1115 28 100.0 29 ............................ TTGGAAGAGATGAGCAAGGCGGTGCTCAA 1172 28 100.0 32 ............................ TCAGGCCAATCAGCAGTCAGCTCCTTTGGTTT 1232 28 100.0 32 ............................ GATGGGCAGTTCGACGATGTTGCGCATGGCGA 1292 28 100.0 32 ............................ CTCGGCCCAACCGTGGGTGAGCAGATGCTCGG 1352 28 100.0 32 ............................ TTCCGCAATAATCCCGCACGCTCAATATCCTT 1412 28 89.3 0 ....................A..TA... | ========== ====== ====== ====== ============================ ================================= ================== 24 28 99.6 32 CTTAACTGCCGAATAGGCAGCTTAGAAA # Left flank : ATATAATCTTTGGAGCCGTCGTGACTGAGCAGC # Right flank : ACTATCGCATAGTCAGTCCAGTTGCCGAAAAGCCTTAACTAGTTTGGCGAAGTAACCGGGTGCACGGTGCGCTTTCCTTCGGCGATGGTGGGCAAGGTCGCGCGCGACAAGGGGTGTCTGCTCACAGGATTTCGGCAGGCTTTGACCGGCTATTCCGTGACGGTAGTGCCGATGTACTCGGAGGATACCCGAGGCTATCTGGCGCCTATGATGCGGCGCAGGCCGAGGGCCGCACGAAGCTGGGTTACGGGCAGTGGCTCTCCGTGCGCACACCGGAGTTCAGGCAGCAGTTCGGCGACTGGGAGGCACTGCGCGCGCAGCAGAAGCTGGACGCGATGGAGCCGGTGAGTATCGCGGTGCCAGAGGGGTGGGAGGCGATGAGCAGGGAGCAGTGGCGCTCCGAGATGGTCGGGCGTCTTGAGTTGTTGATGGAGGACAAGGCAAATGGTCGCTCGGCGACTCCCATCGTGCACCCTGAGCTGGGGGAGATCTTTGTAAAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 41-608 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSZQ01000016.1 Cephaloticoccus primus strain CAG34 contig_23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 41 28 100.0 32 ............................ AATGGGCAGGATGCGCGGGTGACGTGGGTGCA 101 28 100.0 32 ............................ CCCGCCTCGTCCCGTCCGAGATCAACACCTAC 161 28 100.0 32 ............................ AAAACCCACGCCACCCAAGGCATCTTCATGTA 221 28 100.0 32 ............................ GTCGGGGCCAGCGTAAACTCATAGCCCCCCGC 281 28 100.0 32 ............................ CACGCGGCACTGGCCGTAGATCATGCGGCGCG 341 28 100.0 32 ............................ ACGATGTGTTTGCCGTGGTGTCGCCGATCAGG 401 28 100.0 32 ............................ GCAACATTTTCAAACGCCTGTCCGACGCGTTC 461 28 100.0 32 ............................ TCCCCGACCCCAGCTACCCCGTCTACACCGCT 521 28 100.0 32 ............................ TCGCGCAGGAGCTGGGCGCGTTTCTCGACAGC 581 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 10 28 100.0 32 CTTAACTGCCGAATAGGCAGCTTAGAAA # Left flank : AACCTCCAGCCCTCCAGCAGCTTACCCAAAACTAAGTCTAC # Right flank : TCGAAGGCGACCCCCGCCTCGTCCCGTCCGAGCTTAACTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [33.3-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1-329 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSZQ01000018.1 Cephaloticoccus primus strain CAG34 contig_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1 28 100.0 32 ............................ TGCGCGCGTTTGATGAGGTCGTAGAGGTGGCC 61 28 100.0 32 ............................ AGAACTGGAAGTCGTGCGCGGTGCGTTGGTCT 121 28 100.0 32 ............................ ATTCGGGCTTTCTTTCTTCTGGCGCGGGCTGG 181 28 100.0 33 ............................ GTCCACGTGCCACTCTTCCACTCCCTGATCACT 242 28 100.0 32 ............................ GGCACATACGTCACTCGCGACCCCGTCCACGA 302 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 6 28 100.0 34 CTTAACTGCCGAATAGGCAGCTTAGAAA # Left flank : | # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5851-3300 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSZQ01000037.1 Cephaloticoccus primus strain CAG34 contig_42, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5850 28 100.0 32 ............................ GTCGGGGCCAGCGTAAACTCATAGCCCCCCGC 5790 28 100.0 32 ............................ CACGCGGCACTGGCCGTAGATCATGCGGCGCG 5730 28 100.0 32 ............................ ACGATGTGTTTGCCGTGGTGTCGCCGATCAGG 5670 28 100.0 32 ............................ TTCTACGACGGCGGCGTCCTGCGCCCGAAGTC 5610 28 100.0 33 ............................ CGTGCCGCCTGCGCTGGTGACGGAGGCGATGCC 5549 28 100.0 32 ............................ CGAAAACGAACCGCCGCCAAAAATACTGCCGC 5489 28 100.0 32 ............................ TCCTGATGTTCACCTCGTTAAAATCTTATACG 5429 28 100.0 32 ............................ TCATCCCCACCCCCATCCTCGCAGGCCCGGTG 5369 28 100.0 33 ............................ CAGCTCAAGCTCAGTCCCAAGCGGCTGCCTGCC 5308 28 100.0 32 ............................ CGCGTCGGGAATCGGGTGCGGCTGGCGTGCCG 5248 28 100.0 32 ............................ ATGAACAAGCTAAAACAACTCACCGAGGCCAA 5188 28 100.0 32 ............................ TCGAAGGCGACCCCCGCCTCGTCCCGTCCGAG 5128 28 100.0 32 ............................ TGCCCCGCACCCGCGACATCTGGGCCGGCATC 5068 28 100.0 32 ............................ AGTGGATAGAGGCCGGACTCATGATTAAAGCA 5008 28 100.0 32 ............................ TTGTTCATGTCCTCCATTGATGAGCCGCTGGT 4948 28 100.0 32 ............................ TTTAAAGGCGGCAAAGGCGGCCACCTCTACGA 4888 28 100.0 32 ............................ CGTGCGACCGCGCAGCAGCTTGCGAGCGGACA 4828 28 100.0 32 ............................ TATGAGCTGGTGCTGAGCAGCACACCGGCGAC 4768 28 100.0 32 ............................ ACCCCATCGCCGCAAACATCCTGCCCCACGAC 4708 28 100.0 32 ............................ GACGAGCCGCCCCGCAAGCCACCGCCCAAACC 4648 28 100.0 32 ............................ GCTTGTTGAGGGCTTGCTGGAGCCTGCCTTGG 4588 28 100.0 32 ............................ TGATCCGCCGCGCCCTTGTCAGCGCGATCAAC 4528 28 100.0 32 ............................ TGCGCGCGTTTGATGAGGTCGTAGAGGTGGCC 4468 28 100.0 32 ............................ AGAACTGGAAGTCGTGCGCGGTGCGTTGGTCT 4408 28 100.0 32 ............................ ATTCGGGCTTTCTTTCTTCTGGCGCGGGCTGG 4348 28 100.0 33 ............................ GTCCACGTGCCACTCTTCCACTCCCTGATCACT 4287 28 100.0 32 ............................ GGCACATACGTCACTCGCGACCCCGTCCACGA 4227 28 100.0 32 ............................ TTGGGTGGCGTGGGTTTTGGCGTACCAGAGTC 4167 28 100.0 32 ............................ ACATGAGGAGCCAGCCACGCCAGCGCAGTCGC 4107 28 100.0 32 ............................ TAATTGCTTGCCCAGAAATTTCCTGATCTGGA 4047 28 100.0 32 ............................ ATTTACCGCCGGTGTCGATGATGTCTCCGGCC 3987 28 100.0 32 ............................ ACGCAGGGGCACTGCGAGCTCAGAACTGAACA 3927 28 100.0 32 ............................ AAACCACGCCTCGGCCTGTTCACACGTGAGCA 3867 28 100.0 32 ............................ TGCTGGCGGGGCATGCGCTGGTGCTGGGTTTC 3807 28 100.0 32 ............................ AGTGCACCTTGCGGTTGGGGTTCAAGCGCCGG 3747 28 100.0 32 ............................ CTGGCACTGGAGTACGCCGAGGGCCCCTTGCC 3687 28 100.0 32 ............................ CTCAAGGGCCGTGCGCGGCAGGTCTCCACTAA 3627 28 100.0 32 ............................ ACCCGCATCAAGCGGCTGCGCACGCTCCACGA 3567 28 100.0 32 ............................ TTCGACTGGGGCCATAAATGCCTCCTCCGGAG 3507 28 100.0 32 ............................ TCACGGGCAAGGAGCCCCTGCCGTACTACCCG 3447 28 100.0 32 ............................ CGTTCCCCCTCGCGAGCTTCCTGATCCCGCCG 3387 28 100.0 32 ............................ TGAACACCCCGCTGATCGAGGACGTGCAGCTG 3327 28 92.9 0 ..........................GG | ========== ====== ====== ====== ============================ ================================= ================== 43 28 99.8 32 CTTAACTGCCGAATAGGCAGCTTAGAAA # Left flank : AACCTCCAGCCCTCCAGCAGCTTACCCAAAACTAAGTCT # Right flank : TTAATTAACGTATTGATAGAGGCAGATTGTTCCGATTTACACGGAAGTCAGTAACTTGGTAGGTGTTTTAGATTCATGACTCATTGATAATTAGCACCAATTTTTAGTCATATGCTTCGCAGGTTACGAGCTTATGAGTAATTAATTTTATGCGTAGCAGGTGTGTAGTGCGAGTATGCCTATGAGTTTTTACGCCAGCTGCGCAGGTGGTCTGGTAATTCGGCATCGTGCCGGGCTTGCTCTTCTGCACTCCGGCTGCCGAAAGGCAAGGAGTGATTCTTGACCATTGCGTAATAACATTCGCGTGCACCTTGTTCGTCCAGCGCAAAACCATCGGTAGCGGCATAATCCCAAGCTGCCGGAGTCATGCCTGGGCCATCGTCCCAAAAGGGGGAGATTGTCGGGTCTGCACCACAGTCCAGTAATAAGCGAACAATTTCGGGCTCTTGGGCTAGCACCGCATTTACTAGTGCTAGTTCAGCGGGCTCTTCGTAGCTGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 269-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSZQ01000039.1 Cephaloticoccus primus strain CAG34 contig_44, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 268 28 100.0 32 ............................ TCGAAGGCGACCCCCGCCTCGTCCCGTCCGAG 208 28 100.0 32 ............................ TGCCCCGCACCCGCGACATCTGGGCCGGCATC 148 28 100.0 32 ............................ AGTGGATAGAGGCCGGACTCATGATTAAAGCA 88 28 100.0 32 ............................ TTGTTCATGTCCTCCATTGATGAGCCGCTGGT 28 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 100.0 32 CTTAACTGCCGAATAGGCAGCTTAGAAA # Left flank : | # Right flank : A # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 12497-12648 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSZQ01000025.1 Cephaloticoccus primus strain CAG34 contig_31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 12497 29 100.0 32 ............................. GGGTTTCTGGCGCGGCGGATAATCGAGGTGCT 12558 29 100.0 33 ............................. ACTTAACCCGTTTGCAGGGAGTCGTTGGTTGGC 12620 29 89.7 0 ...............A...........TT | ========== ====== ====== ====== ============================= ================================= ================== 3 29 96.6 33 GTGTTCCCCGCGAATGCGGGGATGAACCG # Left flank : GCTTCCCCTTCTATAAGAGGGCGGTGTAGTGACAGAAATACTAAGCAAAACAATCCAGATGAGTGATAATTCCCCTCTCAGTAATAAGTACTGTTTCAGTGCACTGCCTCCGGAAGTTAGAGCTCTTTGGGCGAAGAGTGGTGAAGGGAGTGGGCACAGCTTGCTGGCACACCTGCTAGACGTGGCGGCAGTAGCAGAAACATTATTAGAAATAGAGTCGCCTGCTTCCCTAGACTGGGCTGCGGCTGCTTTTGGTCTACCCAGAGAGCATTGTGCCCGTTGGTTTGCTGCACTGGCAGGGTTGCACGACTATGGCAAAGCGATTCCCGGCTTTCAGGCTAAGTGGGAAGAGGGGAAAGCGGCAGACCAGGCCAATGGGCTGGATTTTCAAGCGCATACGCTTCGAGTTTCGGATCATTCCTGCGCTACTGCTGCATTGTTGCGTGATCCTCTGCATCAGAAGAGCGGTGCAGACAAAGACTGGCTGAGGCATGCCATCC # Right flank : TGCGGACAGGCTGGGCGGCAGCCGCGAGTGGGTGCGCGAGGCGCTGCCTGTGAGCGAGGTCAATGAGCAGAGTTTTCTAGGACAGGTGGCACATGGGCTGGCGCAGGCAGTTGGCCAACTGTATGAGGAGGGCTACGAGGATGCGCTGGAGCACACGGGCGATAAGGAGAGGGCGCACGATGCGGGGCTGAAGAATGTGCCCGCGGCCGCGCTGGAGTATCTGGGCGACAAGCTGGTGGTGGGCAAGATCCTGAAGCCGCTGGTGGGCAAGGTGACGGTGGGGCAGGTGCTGAAGGCGGCGGGGGCCAGTGCCGCCAGCGAGGGCCTCACCGAGGGCGCCCAGCAGATGTGGCAGAATGCGGTGGCCAAGTGGCTGAGCGGCTATGATCCGGATCGCAAGCTGGATCAGGAGGTGCTCCATGCGGCGATACTGGGCGCGACGGTAGGAGGTATCGCCGGTGGCGGGGGCGTGGCCGCCAAGGGGGTGCTACAGGGCGGGG # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTATGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //