Array 1 376147-376843 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHZQL010000001.1 Streptococcus gordonii strain CR01 Sgordonii_CR01_NinaOddballs_Sia_YES_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    376147	    36	 100.0	    30	....................................	AAAGCCACCAGATATTAGATTGAATCCCAA 	
    376213	    36	 100.0	    30	....................................	TAGATGGCAGATGGTTTGATACGGGACTAC 	
    376279	    36	 100.0	    30	....................................	AACGGTAATGCAACCAAAGATAAACCAAGC 	
    376345	    36	 100.0	    30	....................................	ATGCACCTACTTCGTTCTTCCTCATCCCTG 	
    376411	    36	 100.0	    30	....................................	CCAGAGCCATCTAATCTGATTGGAGTTCCT 	
    376477	    36	 100.0	    31	....................................	AAGAAATAGTTGAAATTCTACAAACATCTAA	
    376544	    36	 100.0	    30	....................................	AGAATCATACAAGAGACTAAAGACGGTTAT 	
    376610	    36	 100.0	    30	....................................	TCAGACACGTTTCAAAGAATGTTTTATCAA 	
    376676	    36	 100.0	    30	....................................	ATTTTGCATTTCAAGAGCTAGTTCAGCCTT 	
    376742	    36	 100.0	    30	....................................	AGTACATCAGCATGTACGCTAACCGACGTA 	
    376808	    36	  80.6	     0	.........................T.G..ATT.TG	|                              	
==========	======	======	======	====================================	===============================	==================
        11	    36	  98.2	    30	GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC	                               	       

# Left flank :   TGGACGATTATCTATCCTACAGTGAATTTGTTAAATGTTGCGAAAAAATGGAACTTCTTACTAATCATAGTAACTCACTATATATTGTTTCGTTTCCATCCAATGAGGGCTATCTCCATGTCACTAAAGAGGTGTTAGAGGAAATCAATATTGTTTCAGATTATGTGGATCATTTTGATTCGTTAGAATTTATGTATGATCGCTTTACTAATCAGTATCCAATAAATCAAATGCCTGATGAACAAGAATTTTTAACTTCTTTAAGAAAGGTTGGCCCCTATTTATTTAGTTCGGACATTCTTCATATGAGTTTATCAATAGAGGATCAAGTGGTATTAAAGATTTTAAACAAATTGTATCAGTATGAAATGAAAACAAAATTCCGTATTGGAGCAGTCAATCCAATGTTATTGAAATATTTGGAAGAATAGTATTGACGAGTGTGATGTAAGGATTTATAATATTTTTGAGGTACAGAAACCAAAATTGACGAATTTGAG
# Right flank :  GTTATTCTTTACGATCTATCCAAAAAAACCACCTATTAGGTGGTTTTTTTAAGTATCTATCACTGCTTACTAGAAGAAGAACTTGAGCTGCTTGAGCTACTTGAGCTACTTGAGCTGTCGCTGCTGGATTCGGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGGTCAATGGTCGATTCGCCCTTGCGTTGGCTGTAGAGACTGGTTGATTGGTCTCCTTTTTCTTCCTCGATTTTCTTCAATGCTTTGAAAGAGTGCTTGTAAGAGTATTTCTTGACATCTACCTTGCCCAAGTCATTACTCTTGTAGAAGCGAATCAAGTCACCGGTTTGAATAGCGTCACTAATCTTCAGTTGAGTATTGGCAGCATTACGTATGTCATCCAGTTCTTTCTTGATGGTTTCGTCTGGATTGGTAATTTCCTCACCGGTTTGAGTGTAGTAAGTCCGTCCGTTGAA

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0.37   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//