Array 1 843713-846250 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045007.1 Latilactobacillus graminis strain LG542 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================================================================================================================= ================== 843713 36 100.0 30 .................................... TGTAAATCCTGCTTGAATTCGAGCTCTGCC 843779 36 100.0 30 .................................... CAGATGGGCCTAACCATGCAACATACTCAA 843845 36 100.0 30 .................................... GAAATGGTGATCACTGGATAATCGGCTTTT 843911 36 100.0 30 .................................... TGCAACATTTGCAATGATTGAACGCAATCC 843977 36 100.0 30 .................................... AGAGAGCAAGTCTAGTGACGTTAAGTACCT 844043 36 100.0 30 .................................... CGCCAATAAGTTCTATTTGCGGACAGCCAA 844109 36 100.0 30 .................................... ACTAAAACTATGCTGAATGTTGTTAGAATC 844175 36 100.0 30 .................................... TGTAGGAGGAATAGCATGGTTTGAGCAATG 844241 36 100.0 30 .................................... AAGTCCCGCGACTGTGTAGCCCCGAATTAA 844307 36 100.0 30 .................................... TAACTTAATTGGGTTCGTGGCAATGTCCTG 844373 36 100.0 30 .................................... AGCAGAAATGGTACAGCAATACAAGGCTAA 844439 36 100.0 30 .................................... TCACTTATCAAGAATTCGAGCCTGGTTCAA 844505 36 100.0 30 .................................... TTGAAGCACGACCAAATGGGGTAGAGGTGT 844571 36 100.0 30 .................................... AACTGCTATTATTTGCGAATATTAATTCGT 844637 36 100.0 30 .................................... TAGCGATTCAAAAAGATTTACCAACTTTGA 844703 36 100.0 30 .................................... AAAATTAATATTCAATGATGTCATGATATT 844769 36 100.0 30 .................................... ATGAAAACGGTTGGAAACAAGCATCTAGAA 844835 36 100.0 30 .................................... AACACGTTGGTCAGGCGCTTAAATCTGGCA 844901 36 100.0 30 .................................... TCAGCTTCTTCAAAATCAGCTTCAACTGCG 844967 36 100.0 30 .................................... AGATTTGAGTGGTGTTGTTCAAGATGATGA 845033 36 100.0 30 .................................... GTACGTACTGAAGATGGATTCTTTGTTTCT 845099 36 100.0 30 .................................... AGAGTCAGCAAAAGTTTATCGATAAAGTTT 845165 36 100.0 30 .................................... TGGTGGTGTTGCTTCCTCGTCAGTCACATC 845231 36 100.0 30 .................................... TAGCATTTTTCTTCACAAATTCTATTATTC 845297 36 100.0 30 .................................... TAGCTTCCAAACGTTGCGAACGCTGCGTAT 845363 36 100.0 30 .................................... TTGTTCTTTAGTAAATCAATAAGTTCATGT 845429 36 100.0 30 .................................... CATTAATATGACAGAACAAGCACAGAATAC 845495 36 100.0 30 .................................... TTGGAGTGAAAAGCGAATATAATTTCCATT 845561 36 100.0 30 .................................... AATTGACCCGGCAGACTTTACGAGCGATTT 845627 36 100.0 30 .................................... ATTATATCCAGATAAAAATATTGTAAATCG 845693 36 100.0 30 .................................... CATAATAATAATTAATACAACAGCAATGGT 845759 36 97.2 30 ...G................................ TACAACTTTGGAACAAGCTGTTGCTATCCT 845825 36 100.0 30 .................................... CATTGGCTTCAGCTGCCGCTGCTAAAGAAA 845891 36 100.0 30 .................................... AACTTCCTTAGGATCTAAGCCGAGGGCCTT 845957 36 100.0 30 .................................... AATATGACGGTAAATCAGTACCGCCAGGTT 846023 35 86.1 157 ....................-....T...A..A..T TTTAAGAGCATAGTTATGAATCAATTAAGAGAAAGAATAGGACTTTTAATTGTTAAAATGTTTTGCTATACTCAATGTGTATCAATTGACTATAGTAACGGAATGTAAACTTTATCAGAAAGAGGAATTCAACCAAACTTGCATTTGTAGGTTTGTA 846215 36 83.3 0 ......................G..G..TT....TT | ========== ====== ====== ====== ==================================== ============================================================================================================================================================= ================== 37 36 99.1 34 GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Left flank : GCAATTGATTTGAATCACCTATTTCAGAATCGGTTGATTAAAAAATTTGCCGCCGATTTAACGGATCAGCATCGGCAAAAGTTAGCCCAACTAGATAGTGAAATTCGTTCGACAATTTTAGATGCCGCCTTTATGTATGAACTGACGCTTGATATTGACCAGCAATGGGATCTTCAAAGAATGATTAAGTTCTATAATTTACAATTTTCGACTGTCGTCCAACATGACCCATATGGTATAATTGAGAGTATAGTACAGACAGCAGTTGAGTTAAATGAAGCAAAAATCATCACGTTGATCAACGTTTCGCACTACCTCAGTATCAACCAATTCAATGAATTGGTGAGGTTGGTGGCGACATTGAATGTGAAACTCTTTCTCATCGAATTTTCAGAAGAGGCTAAATTTGAACAGTACCAGAAATGTTGTTATTATCACATCGATAATGATTATGTTGAATGGCGCTATGAATAGAATGAGATTCTGATGAAAAAACGACG # Right flank : TGTATAAAAATATATTTTCATACAAACTTACAAAAGGAGTATCGTGATGTTCAATAAACAAAAATATCAACGTGATTACCAACGGAAATTAAGAAATAATCCAGAGAAAAAAGAGAGAGTAATGTACTATCAATTAAAATCACAGACAAAAAGATTTATTAATTGCTTCGCGAAAGATAAGGATATCCTAGAAATCCAAGAACTAATAGAAGGCAGAAAATAATAGAAATGCAAATTGAGAGCTTGTGAATTAAAATATATCATCGGCATTGAAAACAGTTCTCAATTAGCATAGAATTAAGAGCGTATAATAATTGCTAGAATGCGATTCTTGGAGGGTCATCTATGTCTAAATTAGAGATTATTGATTTGCACGTCGGCATCGACGGTAAGGAAATTTTAAAGGGTGTTAACCTGGAAATGAACACGGGTGAAATTCACGCGATCATGGGACCTAACGGGACTGGGAAGTCGACGCTTTCAGAAACGATTATGGGCAA # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.30, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //