Array 1 86237-87283 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFG01000010.1 Salinivibrio sp. MA351 scaffold10.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 86237 28 100.0 32 ............................ TCAACGCAAAGCGCGTGGCCGTTGGCTAGCTT 86297 28 100.0 32 ............................ CGCCCGTATGTCAGCGCGCGTGACGTCGACGC 86357 28 100.0 32 ............................ TTCCGGCACGGACGCACGCAGCTCCGCGACTA 86417 28 100.0 32 ............................ TCAAGTTGCAGTCCCGTTACTTGCTCCCACTG 86477 28 100.0 32 ............................ GTTAGACCGTCGGTGTTAACCTGAATCATTTC 86537 28 100.0 32 ............................ GTTACGATGTGCGTTCCGACCCACTTAATGAT 86597 28 100.0 32 ............................ AATAGTGCTTTGGTGTCGATGTCGTCACCCGG 86657 28 100.0 32 ............................ GTTGTTTTATCTAACGACATACAAAAACCCTG 86717 28 100.0 32 ............................ GCAAGTGGGTAGTAGCCGAGGCGGGATTTTAT 86777 28 100.0 32 ............................ CATCGCCACGGATCCAGAGATAACGATCATAT 86837 28 100.0 32 ............................ ACTCCATGAGCGGCGCTGTCTGGGTCAATTCC 86897 28 100.0 32 ............................ TCTCGTATCTCGCTAACTGTGCCATCAAAGTT 86957 28 100.0 32 ............................ TTTTACTTGCTCGCGAAAATCACTACGCAGCG 87017 28 100.0 31 ............................ TAACTCAGCGTTTTGCTGAGCTTTTCGAAAA 87076 28 100.0 32 ............................ GCCCGGTAATGGCACCGCAACGCCCATCGACT 87136 28 100.0 32 ............................ ATAACGCAGATCTGCCCCAAACTAATTTGGAA 87196 28 100.0 32 ............................ ATGATTAAAACAATTCCAAGATAAACCCTTTT 87256 28 78.6 0 .............T..A....G...GTG | ========== ====== ====== ====== ============================ ================================ ================== 18 28 98.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TCGCTAAACCTATCACTTTTTGGCGGATTTTATTTTGTATTGCGTCTTGCAATGGCTACGTAAGACGTGCTCTGACCGTAGGGCCTGATGCTTGGTTTTACGCCCGCGCGTCCGCTCACGCCATACCTTAAAGCTGCGTGGTTTTAACTCGCGCCGCATCAAAGCGATGACGTCATCCTGACGCAAGCCATACAGCGTTTCAATCGCCTCAAAGGGGGTTCTATCTTCCCACGCCATTTCAATGATCCGGTCAATGTCTCCCGGTTGCTCGTTCAATGCCATATCGGTCTCCTTGCTCTAGTGGCAAACAGTACGCGTAGAGCATGAAAGACCGATCAGCGTGAGCCCTCAGACTGAGCAATGCTTTTACCCTTGTTTTTGGGATATTTAGAAATAAATAGCGAATACAGTCAGTTACGACTGGGCGTTTTTAATAAGGGTAAAAAACGATTTTTATCCTAACGGCCTGTTGTCACAGGCTATTATTTCGTTATTCTATA # Right flank : ACACAAGCCCCGGCACGGTGTTGGATATGTGCAAATTGCCAACGGGCGCCTGTCACGATCGAGGTTAATCGTTGGCTCCGATGTCGGAGGCGCGCAGTCCGCTTGGGTAATACATGACAGACATCGCACTGGCGCTTGTCCGACCTACACACCATTTTAATATCGGAGGTGCCATTGGCTTACATTGGTTATCGGAACAGCCACTTTTGGCCCGATGATACCATTCGCGTAGGTGACACAAGCCCCGGCACGGTGTTGGATAGGTGCACATTGCCAACGGGGGCCTGTCACGATCAGTGCCAATTTGACGACGATGGTGCATAGCGTAAGTCATACCAAGCTTGAATGAGAATCTTTATGTGTGCTGCTGTATATCCAACGTTGTTCGGCTGAATCAATATGAGTTAAAAGTTGGGAGTCACTGACAAAAGCGTTATAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 9041-9968 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFG01000008.1 Salinivibrio sp. MA351 scaffold8.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 9041 28 100.0 32 ............................ GCCAAGGGGCCGAAGACAAAGCAGTGCGACAA 9101 28 100.0 32 ............................ CTACGAGCGCGAGATCTGGCTGGCGGATCAAC 9161 28 100.0 32 ............................ GACGGGTTCGTCTGTCGAGAAAATGCGCGATT 9221 28 100.0 32 ............................ TGCGCAGCGTTTCGGCTTCGAGCCGCTTTACT 9281 28 100.0 32 ............................ TCCAGTCTCTCGGCGTCCGTATGCCGAACCTG 9341 28 100.0 32 ............................ CTACGAGCGTGAGATCTGGCTGGCGGACCAAC 9401 28 100.0 32 ............................ TAACATGTGCCCCATTGAGACGAACTCGTCAG 9461 28 100.0 32 ............................ ACTCAGACTTTCGCGCAGCTTCAAATCACCTA 9521 28 100.0 32 ............................ TGTCTCATATGAATAACAACTACCCGGTGCAG 9581 28 100.0 32 ............................ TACAAGCAGCCGCACAGCCCGACCCGATGAGC 9641 28 100.0 32 ............................ GGTCAAAGGTGCGCGCGTCGGTACATGGAAGC 9701 28 100.0 32 ............................ CAGCCGCGCCAGCGCATCGTTAATAGAGAGCT 9761 28 100.0 32 ............................ CATTGAAGACTTAAACACCGCTAGCGTCTTGC 9821 28 100.0 32 ............................ AATGCGAACGCCAATCAAAGAACATGATGCAA 9881 28 100.0 32 ............................ AGTTCGAACAGCGAGGGCCGGACTGCCCCGAA 9941 28 85.7 0 .....................G...GTG | ========== ====== ====== ====== ============================ ================================ ================== 16 28 99.1 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGCAAGACTATGCCTACTTTAAACGTTGGAACTACAAATCGCCGCAGCGACTTTACAAAAATCTCGACCGGCGCGCGGCCGCGATTGCCAGCAAAAATGGCTACGATGAGGAGGAAGTAAAGCGTCGTCTGTTGGAAAACATTAAAACGGACGACAAACGCTGGTCGCTGCCTTTTATTCAAGTGACGAGCCTCTCGAGCCAAAAGCGAGCAGGGCAGCCAAATACCGAGTTTGCTTTGTATATCGAGCGGGAAACAACCAAACAGCCGCCAAACAAGGACCAACCGTTCACCTGTTATGGGCTAAGCCGACGCGAACCCGATCAGCAATCTGCGGTGCCGTGTTTTTGAGGGGGAAACCCCTCTTTACCCCTTCTTTTTGGGCTCTTTAAAAATAAACAGGAAATACAGTTAGTTACGGCAGGCCATTCTTAACAAGGGTAAAAGACGATTTTTATCCTAACGGCCTGTTGTTACTGACGATTATTACGTTATTCTATT # Right flank : GACACAAGCCCCGGCACGGTGTTGGATATGTGCAAACTGCCAACGGGCGCCTGTCACGATCGAGGTTAATCGTTAGCCTCAATGTCGGATGGCGCGCGGCGCAAATCACACCAAGTTTGTTCGATTGAGTTGGCGCTTATGCCGACCTACACACAGGCAGCTTAAGTGTGTCAATAAGAGGCATACTTAAATGATTGACCCATATTCATTTTTTAACCATATAAACCGTGTTAAATTACTGAGCTGTATGAAAGAGTAGCCATACTTTGCCTAGCTTGTCGCCTGACAAAATGGAGTGTTGGAATGCGAAGAAAAACGAAGCGCAAAGACTTTGCAGCGCTTAATGAGGAGTTAGCCTCTCTGAAGCAGAAAGCGCAAAAGAGTGATGACAATCTCTGGGAAAGCTACGAATGCCAGCTTGTCACTCCCATGTATGGCGGCGGTGTGCTCGCTGGAGAAATTGATCAAGCCATGCCTATTCGCGCGAGTGCGATTCGTGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 18551-20018 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFG01000008.1 Salinivibrio sp. MA351 scaffold8.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18551 28 100.0 32 ............................ GCCCACGTTGCGGTCTCGTCGAGCGGATCGAC 18611 28 100.0 32 ............................ AACGCGTCAACGCGCGCGGCGTGCAAGTCGAT 18671 28 100.0 32 ............................ GTGACGGCCAGCCGTGGCGACGGGCGCCGATC 18731 28 100.0 32 ............................ GGAAGACGTCGGGGAGCAGCTTGGCGTGTTTA 18791 28 100.0 32 ............................ GGAAGACGTCGGGGAGCAGCTTGGCGTGTTTA 18851 28 100.0 31 ............................ GGTGCAGCTTCTTCCATCTTCATTATAAAGA 18910 28 100.0 32 ............................ TGATCAAGTATCGATTCATCGCAGCGGAAGGC 18970 28 100.0 32 ............................ AGCCGGATTGATTGTTCCTTGCCACAAGCCAC 19030 28 100.0 32 ............................ TCAAAACAAACATCATCGTGATATTGCGCGAA 19090 28 100.0 32 ............................ TCGACAAGATCATAAAAACACACATGCCAGCG 19150 28 100.0 32 ............................ GTTATCTTCGCGCGTGACGTTGATTTCTTCGA 19210 28 100.0 32 ............................ ACTTCGTCAGCTTTGAAAAATAATACCAAATC 19270 28 100.0 32 ............................ GTTAAAAATCCTAGCACGTTTTTTGCATTCAT 19330 28 96.4 32 ..........................A. ATGACGCAATGACACTGTTCTAGGTCCAGTGA 19390 28 92.9 32 .............T............A. AAGACGGCGAAACATTTGGTGCACAAGTTGGC 19450 28 92.9 32 .............T............A. ATTTCGATTGGGCGATTTCGCCATAACGGTTT 19510 28 92.9 32 .............T............A. AGAGTCATTTGAAGTAATCGGCAAGCTAACGC 19570 28 96.4 32 ..........................A. TAAGCGGCGATGACGTTTTGCTCATTGAGCAA 19630 28 96.4 33 ..........................A. GCTTTGATGATGCGTGAATGCGCAGTGAAATCA 19691 28 96.4 32 ..........................A. ATTTCCACCACATCGCCAATGGCGGCTGCTTT 19751 28 92.9 32 .............T............A. TACAGCCATCACTTAACCTCTTGCCAAATCGC 19811 28 92.9 32 .............T............A. ATGTAAAGCTGTGTACCAGGGCCGAGCAAGTC 19871 28 96.4 32 ..........................A. TTTAGCAATAGAACGAGGATGACGAGCACCAG 19931 28 96.4 32 ..........................A. GGAGATAGCATCAGCACTAACTAACTTAATGG 19991 28 82.1 0 .............T.......G...GTG | ========== ====== ====== ====== ============================ ================================= ================== 25 28 97.0 32 GTTCACTGCCGCACAGGCAGCTTAGAGA # Left flank : TTGTCGTGGGGTCCGTCGCTCATAACGTTTTACCTTACCAAGTTTGACTTCTTCAGATGCAATCAGGGCTTCTTGCACAAAGCTATWGGGTAAATCAGGGTTCTCAGTCATGATTTTCCCAATTTTTGCCCAATACTCAATTTGCTTGGGCACAGAGCGCATTTCAGCTTCTGCATGCACTTTTACATCTGACACAAACTCATCATCTAACCGTACACTGGTTGGCATGATTCATTACCTCGCTTATATGTCTGTACAAGCCACTATGCGACAAAATATCGCGCCTTGCAACATATTTAGAACTGGCACATCTGGCGTGACTTAAGACGGCTCTGCTTCAACATATGTGATAATTTGATACCCTTGCGACCCTGCTTTTTTGGCCGTTCAAAAATAAACAATAAATACAAAGCGTTACGGAAACCGATTTTTAACAAGGGTAAAAGACGATTTTTATCCTAACGGCCTGTTGTAACAGATGATTGTTAGGTTATTCTATA # Right flank : GACACAAGCCCCAGCACGGTGTTGGATATGTGATAACTGTCAAAGGGCGCCTGTCACGATCAGTGCCAATTTTAACGACGATGTCGGATGGCGCGCGGCGCAAGTCACACCAAGTTTTTTCGATCGAGTTGGCGCTTATGCCGACCTACGCGAACTTTGACATCGGTGGTGCCATTGGCGACCGAGATACAAGCCCCAGCACTGTGTTTGATAGGTGCACATTGCCAACGGGCGCCTGTCACGATCGGGGATTAATAGTTGGCTCCGATGTCGGATAGCGCCAGTTGCACTGCGCGCGGCGCAAGTCACACCAAGTTTGTACGATCGAGTTGGCGCTTATGCCATTGGTGAAGGAGACTTCGCAAACCAAAACTGGCCTCAAATGAGGCCAGTTTTGCTCGTATTAAACCTTTGAATGTGCGAGTGTTATACGATACGTCGCCGAAAGATGCGATGACCAACCGCATTGAACAACGCGCCTGCCACAATTAACCCACCAC # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.82, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //