Array 1 45205-44047 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANQH01000016.1 Streptococcus agalactiae MRI Z1-205 ctg7180000001214, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45204 36 100.0 30 .................................... ATAAGCCAAATCGTTTTGTGATAGATTATT 45138 36 100.0 30 .................................... GATGGCAGGTTATTACGCTTGGCTCATTGA 45072 36 100.0 30 .................................... GATATGGTGGACAGGTTCAGCAGGTCATGT 45006 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 44940 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 44874 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 44808 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 44742 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 44676 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 44610 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 44544 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 44478 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 44412 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 44346 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 44280 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 44214 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 44148 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 44082 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : ATTTTTACACGAGTGCTAGAAAACGGGGCAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //