Array 1 30365-32553 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB898037.1 Thioalkalivibrio sp. ALJ16 D000DRAFT_scaffold00001.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 30365 28 100.0 32 ............................ TCGTAGCACTGCACCTGCCGTGCGCGCTCCTG 30425 28 100.0 32 ............................ GCCTTTTCACCGCACACCAGGATCGTCGTCTT 30485 28 100.0 32 ............................ ACGGCATATCCACTTGGGTGTCCGCGTCCAAA 30545 28 100.0 32 ............................ CAACGGTCCAGGCGGGCGCGGCGTTCCTCGCG 30605 28 100.0 32 ............................ AGGTTGCGGCCCTTCTGCTGCACGAACTGGTC 30665 28 100.0 32 ............................ GAAGTGCTGCGCCCCAACCGGCACCTGCTCAA 30725 28 96.4 32 A........................... GGTGGTTTTGGTCATGCCGTGCGCTCCGTCCG 30785 28 100.0 32 ............................ AATCGTGAGAGCCGCGAGGCCGTGGATGTGGC 30845 28 100.0 32 ............................ GACGATCTCCTGCGCCGCTTTGTTCGCGGCGA 30905 28 100.0 32 ............................ GAGTCGAACCTGAGCACCCTCTTCTTCAGCGA 30965 28 100.0 32 ............................ TCCATGGCGCACCCAGCCAATCACCTCCAGTG 31025 28 100.0 32 ............................ GACTACCTGTGCGTCAACAAGCGCGCGTTCCT 31085 28 100.0 32 ............................ TGTCAGTATCCTGCTCGGGGCTGACTCCGCCG 31145 28 100.0 32 ............................ ATTGACGAGCTGTGCGAGCGGATCAATACCTC 31205 28 100.0 32 ............................ CGCGACATACAAATAATTCGCCGGGTTTTGTC 31265 28 100.0 32 ............................ TCATAGTCCTGCTGCCATCCACCTGTCCCCCA 31325 28 100.0 32 ............................ ACCAAAGTTCGGAAGGACCTGCATCGATTGGT 31385 28 100.0 32 ............................ GAAGGAGACTCGGAGCCGCGGGTCGTTCTGGA 31445 28 100.0 32 ............................ ACGTTTCGGTCGTGTCGGCTGGGATCGGTGAC 31505 28 100.0 32 ............................ CCGGCACCGCTTGCCGTCCGCCAATTCTATGC 31565 28 100.0 32 ............................ TCCAGGATCTCGCTCACGTCCGCGTGGAACCA 31625 28 100.0 32 ............................ GCAGAAGCTCGAGGTCAAAAGGCGCTCGGACG 31685 28 100.0 32 ............................ CGCCCCCGACACTCATAAACACCCCGGCGACT 31745 28 100.0 32 ............................ CTGGCGGCGAAACTCACCCCACCCCTGGTCGA 31805 28 100.0 32 ............................ CCGGAGTGGCGACGTACTCCGCGCGCTTCTGA 31865 28 100.0 32 ............................ GAAGTGCGCATCCGCGAGATCGACCTGGTGCT 31925 28 100.0 32 ............................ GGATGTCGACTCAGTGCGCCCTCGCTCTGCAA 31985 28 100.0 32 ............................ TACCCTCGACCGCACCCTGGCCTCCCTTGAGA 32045 28 100.0 33 ............................ GCTGCCCATGTCGTCTTTAGGGGCGGCCTCGAG 32106 28 100.0 32 ............................ CGAATGTGTTAACGCAGGCAGACTATATCGCA 32166 28 100.0 32 ............................ CCTTCTTCCGCGGCGTCCTATCCTCCGATCTC 32226 28 100.0 32 ............................ GGCAGCTTATATCGCTGTCGCACAAGCCGCGA 32286 28 100.0 32 ............................ CTGCGGAGTCTTGTTCGGCTGAGACTTCTGCA 32346 28 100.0 32 ............................ TGCTGCTGCTTTTCGCTCTGCGCGGATGCGCT 32406 28 100.0 32 ............................ CCGTTCGACGTCGACCGCGCCGGTGCCGCGCT 32466 28 100.0 32 ............................ TTCCGTTTCTTATATCAGAGATAGCAGACATG 32526 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 37 28 99.9 32 CTTCTAAGCCGCCCACGGGGCGGGAAAC # Left flank : GCGTCGACAGTCCTTTCCCATTCCGGTGCCCCCGTGCGGGAACTCGCCAAGCAGCTGGGCGTTTCGCCCGCCACGCTCTATCGCCACTTTCCCGGCGGTCGGGCCGCGCTCCGTGACAATGGCGATGAATGAGGTCCGTCTGCGCAAGGTCGCCCCTGACCGCAACCAATTCCGGTTTTACCGGATGTTCATTCAGCGAGGCCTTTTCGGTGGGTATGCCGTCTGTCGCGAATGGGGTCGTATCGGACACCCAGGAACCACTCGCGAAGACTGGTGCAGCACCATCGAGGAGGCAAAGGCGAGCCTGGGGCAAAGGACCGCGGCCAAAGTCCGGCGCGGCTACACCGGTTGGTCGCAGGATGCTTAGGGCAAAAGGGAAAGGCCCGGGAAGGGAATGGTAGAGAGAATGGCAAGGGGCTTACCCTGAAAGGGCCGGACAAGCCCGGAAACTTCTACGGGGCGGGAAACTGTGCCCACGGCCGCGCAGCGGCTGTGCACAC # Right flank : CCGTAGCAAATCAGCTCTAAAACGTGGATTTCAATAGAAAAAACAGAACAGAAAGAGATATAACCATACGAAAAGAAATGCTATGTAAGTAGTTGTTTTGTTGGTTGATAAAAAACGGTAAGGAAAACATGGTTGTTTCGCTAGAGGCAGAACGATTTCATCGTGTCGATCATCCTGGACAACGCCCTGGTTTCATGTGCCGAATCGATCACACTCCTCCTAAATTCACGGTTCAGGTGGCGGTCGCCCCCTTTCTTGACGGCCATCTCGAAAGCCACGGGCAAAACCAGAGAATCCTTTACGAGATCCGCAACATCGAAAACCAGGCCCCCTCGGCGCGTCTTGCCGTGAAGAACGGGCATCGCGTAAGGAATGCCGAGCGCGTGGAGCGCAGTGGCCGCATAGCCGTAAGCAAGGTAATTGCCATGGTCGATGAGCCCGTTTGCGACATCGGCGGCCGAACCCGTGGCCTGCTTGCCCTCATCACGGTGAAAGTCGCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAAGCCGCCCACGGGGCGGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.40,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA //