Array 1 254-1002 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGZR010000093.1 Psychrobacter immobilis isolate Psychrobacter immobilis 1347, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 254 28 100.0 32 ............................ TCAAGCGTTTGACCTTCGCGGGTTAGACGGAT 314 28 100.0 32 ............................ AATGAAACTAATCCGCGCCCTATTCCCTTACG 374 28 100.0 32 ............................ GGTATAGTTGCCGCTTAGCGCCAAGCTCAGAC 434 28 100.0 32 ............................ ATAAGCTGCGCCGCGCTGGTCGCGATGTGCTA 494 28 100.0 32 ............................ GCCATCGTAAAACGCTCGATGTAGCGCATACC 554 28 100.0 32 ............................ TATATCGCCGCTGCCACTAGCGCGGCGGGCAT 614 28 100.0 32 ............................ ATGCGATAGGCTTGCTTGTCATCTTAGCGACA 674 28 100.0 32 ............................ TACCAAGTAGCGGCGCGGGTTCTTAAATATCT 734 28 100.0 32 ............................ TTAGGTAAATTCCCAGTCATGTCTTTGCAAGA 794 28 100.0 33 ............................ CATGAAAAACATCAAAGTCAACTACACAGACTA 855 28 100.0 32 ............................ GCGAAGACGAGCAAACAGGTAAGTATATTGCA 915 28 100.0 32 ............................ ATTGCATGATTGGTCAAGCCATTACGCTGATG 975 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 13 28 100.0 33 CTTCCTCACCGCATAGGTGACTTAGAAA # Left flank : GAGTTTACTTGTGGTAAAAACAATCACATCAATGGCATTGAGAACTTTTGGAATCAGTCTAAACGAACGCTCAGAAAATATAATGGAATTGATAAGAAGAACTTCCATTTGTTTTTAAAAGAGTGCGAGTTTAGATTCAACTATGGTTCACCATCTAATCAGCTGAAAACGCTGAAAAAATGGTGTGATATTTAATCCTTATCTACTACAGCCCCTAGAAAAATACATCAGGTTCAACCGCTGAAGCTGCTTGC # Right flank : AATGTGCATGATTTCGTATCAGTGATGTAAATACCCCATTCTTAACACAACATCATCGTAGAATAATTAAGCCACCTGTCTGTACTCGGCAGGTGTCATATCATTAAGTGAATCATGGGGTCTTTCGGTGTTATAAACCGTGATCCATTCCTCAGTCAGTTGACTGACCTCGTTTAAATTGTTGAAAAGGTAGCAATCTAAAACCTCATTGCGATAACTGCGATTAAACCTTTCAATGTAAGCGTTCTGATAAGGACAGCCAGGCTCAATATAGTCAACATAGACACCATGAGCTGATGCCCAATCAGTGAATGTGCTAGATGTAAACTCACTGCCGTTATCTACCCTTATTTGCTTAGGGTAACCATGCCACTCGGCTAACTGGTCAAGGTAACGAATTACTCGAAGTGAAGGCATGCTGGTACCAATATCAATGCCTAATACTTCACGGTTGTAATCATCAATCACATTAAAGGTTCGAAAGCGAATATTGTTGTGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5857-129 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGZR010000057.1 Psychrobacter immobilis isolate Psychrobacter immobilis 1347, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5856 28 100.0 32 ............................ TTGAGCACTGTTTTTATATCGTCATCAGTACG 5796 28 100.0 32 ............................ TGCATCACGTAATATTTGGCTGCTAGATGCAC 5736 28 100.0 32 ............................ AAGACGCAAAAAACCCGCTTACAAAAGCAAGC 5676 28 100.0 32 ............................ ATACCCACCTCCACATTAGTTTGTTAAATCAA 5616 28 100.0 32 ............................ TGTACAGGCCATTATTATCACTTATAGCGTCA 5556 28 100.0 32 ............................ TGAGTGGACAGAGCGGAGAGACACTACCAACA 5496 28 100.0 32 ............................ TCACTATTTGAAATCGAAGGCAGCCCTAGTTA 5436 28 100.0 32 ............................ TTTATCTGTCACGGTTGCTTCTATGACCTCAC 5376 28 100.0 32 ............................ TGTTTTGTCTCACTGCCATTAACCACCTCTTC 5316 28 100.0 32 ............................ TGAGCTGGGTGTAACTATGTATCGATAACCAT 5256 28 100.0 32 ............................ TGATGACGTCAGATTGCAGTGTGTTGAGATTA 5196 28 100.0 32 ............................ TTTGTGTTTGGCGACCAGTTTAACCCTAATGA 5136 28 100.0 32 ............................ TAGTTATGATGATCCAGGAAAGATATCTATTG 5076 28 100.0 32 ............................ AATTGATGTGCAATTGCCTTGCTCACTTACTT 5016 28 100.0 32 ............................ AATATCAACGGTTACTTTGTACTTACCGCCTT 4956 28 100.0 32 ............................ AATTATGGTAGGGCTATGATAAAGAAAATGTT 4896 28 100.0 32 ............................ AGTCCTTTATCGCGTTTATAGGGTGATCGGTA 4836 28 100.0 32 ............................ CACACCGATTAAGGTATGAGCTTTTTAGAATA 4776 28 100.0 32 ............................ TTATCAAAACACTGGCGGCACATACCATCGCG 4716 28 100.0 32 ............................ TTTAAATCAAAGCTACACGCTGACGGCACGAT 4656 28 100.0 32 ............................ CCTAGCCCATGAGTGCAACTCACATTACACCC 4596 28 100.0 32 ............................ TTGTGCTGTGAATATAGCGAAGATGATATGCA 4536 28 100.0 32 ............................ AATGGTCGCCCTTTGTACGGATAGCTTTTTGC 4476 28 100.0 32 ............................ ATCAGAAGCAAAAAACACCAACAGGTGAGCTT 4416 28 100.0 32 ............................ TATCCTAACTTCGGCTTGATACTTCTGCCCTG 4356 28 100.0 32 ............................ GTTACGCTCGCAAGAACCTAATCAACATGGGG 4296 28 100.0 32 ............................ TTATGCGTGGGCTGCGCGGTAAGATTGTTCCA 4236 28 100.0 32 ............................ TATTACACTACCTATTGTTGTGACCGCGACCA 4176 28 100.0 32 ............................ TAGCTGACCTTTCATAACCTTGTTTTCGGCTT 4116 28 100.0 32 ............................ CTATCAGCGTCATTACTCGTATCTAGCGCATA 4056 28 100.0 32 ............................ TTAGAGATACCTCTAGTGAGCCAGTTATGTAC 3996 28 100.0 32 ............................ AACCATCTGTAGATAGACCTGTAACAGTTTCT 3936 28 100.0 32 ............................ TGATTGCTTCATGCCGGCCAATTCTCGGTCTA 3876 28 100.0 32 ............................ GATTACAAACGAGCAGCAGACCGAGCTGAGTT 3816 28 100.0 32 ............................ AATTGAATATATAAGTAACTCTTTGGACGGAA 3756 28 100.0 32 ............................ TCATTACGACCCCAGCCACCAGTCTTAGCCCA 3696 28 100.0 32 ............................ TAAATCCCAAACCGTGTGAACTTTAAGCATTG 3636 28 100.0 32 ............................ TGCCTGATGACAGCGATGTGCCAAGCAAATAC 3576 28 100.0 32 ............................ ATCTACCTTTAGCTGAAACTCGTCACCGACTT 3516 28 100.0 32 ............................ TTTTTCTACAGCAAATAATGCTTTGTAGATAC 3456 28 100.0 32 ............................ TAGTCAATCCGCCTGTTATTGCTGAACAGTTT 3396 28 100.0 32 ............................ ACCTGCGCCCATAATACGCGGCACGATGTGGA 3336 28 100.0 32 ............................ AGTATGTCCACTGGGTACTGCGCGATGCATCA 3276 28 100.0 32 ............................ CAGCTCGATCAGCTTAGCGCCCAACGAGGCCA 3216 28 100.0 32 ............................ TATTTTTGTGCAAGTCCTAATCATGAGCAGCC 3156 28 100.0 32 ............................ ATCATTTATAATCAGCAGCTCCAATCGGTCGT 3096 28 100.0 32 ............................ AGCAGCTCATCAGCATCGTCATCAAAGCCATA 3036 28 100.0 32 ............................ GCCATCTGTGCCAATCAGTCGGTCAGGGCTTG 2976 28 100.0 32 ............................ TGTTGCCATTGCCGCAATCTTAGGTGCAGCTT 2916 28 100.0 32 ............................ CGTCATGTCTTTGCAAGATGCTATCGATAAAG 2856 28 100.0 32 ............................ GCGTACACTGGCAGCAGTCAAAGCAATGGATC 2796 28 100.0 32 ............................ ACTTATAAACAGTCGCTTGATTAAGGCCATTA 2736 28 100.0 32 ............................ TTAGCGCTTGCTGCTCTCTGTTGTTCAGTGTC 2676 28 100.0 32 ............................ CATTGCAGGGCACAGGAACGGACTTTAGAACT 2616 28 100.0 32 ............................ TTTGCTTGCTCAATTAGCGCCTCGTCGTACTC 2556 28 100.0 32 ............................ TTTGTAGTCACCGGCATTGAGTTTGCGTAGCA 2496 28 100.0 32 ............................ TCAAACGGTGAGCAGCTTGTATCAAACGTCTC 2436 28 100.0 32 ............................ TTCAAAAAACATATCCAATGCGTATTAGCTCG 2376 28 96.4 32 ..................A......... TGCTGCTTTTCTTGTAGCCACTGCGCGTAGTC 2316 28 100.0 32 ............................ AGTTACCTAAACGATTGATGGTTATTCCAATA 2256 28 100.0 32 ............................ AGTTCGTTTGGTATCGTTAATTTAAAATCATT 2196 28 100.0 32 ............................ ATAAGAGCCGCGTCTCTAGCGTGTTCATTCGT 2136 28 100.0 32 ............................ TTATTGACCGCCATTGCCGTATGCCTCCACGT 2076 28 100.0 32 ............................ TGCCAAATTAATGACAGGGCTTTGCCTATAGC 2016 28 100.0 32 ............................ ATGTAAATATAAGACGCCTGCGCCTAACTTTG 1956 28 100.0 32 ............................ TGACGATGTACCAGTCCGGCTTCATCTTCCCC 1896 28 100.0 32 ............................ CACTTGTAAACCCAAGCAAAAGCAGCACCATG 1836 28 100.0 32 ............................ TGAATTATCGACATAATCAATATCAAGTTGGC 1776 28 100.0 32 ............................ TTAATCAGACTGCTTTTGATTTGCTTAATAAT 1716 28 100.0 32 ............................ ATTTAATAAAGTTAAGTTTGTCGAGAGTGATT 1656 28 100.0 32 ............................ CGAATTATGCATCATCTGATAACAAAGGCTGT 1596 28 100.0 32 ............................ CTCATGTTATTAATGAGGGTATCAACTGAACT 1536 28 100.0 32 ............................ ATCTGATCTAAAACGCGAACATCTAAATAATC 1476 28 100.0 32 ............................ TTTGGAACTATGACAGACCTTGTTAAAGGCTT 1416 28 100.0 32 ............................ TGACAAAGAATCTATATTAATTCTATAATATA 1356 28 100.0 32 ............................ TGACAAAGAATCTATATTAATTCTATAATATA 1296 28 100.0 32 ............................ CGAAAATTTACTTTGTTAAACTGGCTAACCGA 1236 28 100.0 32 ............................ TTTGATTTATCTAACTGCCAAACTGATTGTGA 1176 28 100.0 32 ............................ CGCAGGACACTGTAAATCAGGGACACACTGAG 1116 28 100.0 32 ............................ AGCCAACCGACAAGCAGGTAGATGACCGCTTG 1056 28 100.0 32 ............................ ATAGTTCGATAAGCTCAGCGCTATTATTGCTT 996 28 100.0 32 ............................ TTACCCAGCATTGGTGGCATCCGCGTATAACT 936 28 100.0 32 ............................ CCTTTGACGTACTAAAAGACCCTAGTAGCTAT 876 28 100.0 32 ............................ GCCAACGCTTTTTGTCGCGTTAATTGTAGTAG 816 28 100.0 32 ............................ GGCAAATAAAATATTCTGTAATTTAGTGAAAA 756 28 100.0 32 ............................ TCATCACACTGGCTGTCAGTATCAGGCAGCAA 696 28 100.0 32 ............................ GATTGTGCTGCTATGTGAGCGTCACGAATACC 636 28 100.0 32 ............................ GCAGCAGGTGTATATCTCTATCAGAATTGGGA 576 28 100.0 32 ............................ AGTTTTAGAGGACGCACGAACACACGAGGAAA 516 28 100.0 32 ............................ ACTCAGATTTAAAGCCTAGCTTATCAACCAAA 456 28 100.0 32 ............................ TTCTAGTGCATGGCTCATTTGAACGGCGCTAA 396 28 100.0 32 ............................ TACCGCCCGTCCAAATAATAAGCCCTGTCATT 336 28 100.0 32 ............................ ACTGATTATGCTTATATTGCAGCTCAACGCAT 276 28 100.0 32 ............................ TAACTGGTATTCTACAAACGCTTTACAGTTTT 216 28 100.0 32 ............................ TAATCGAGTGGCTTCTTGTCTCGCAACTTCTA 156 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 96 28 100.0 32 CTTCCTCACCGCATAGGTGACTTAGAAA # Left flank : GCATGTGAAGCGCATCAATGAGGTTGGTGACAAAGCCAAAGGGCACGTTGTGATTAGACGCTACCGCCATAAAAACGTGCTTAAACAGGCTGAAGCATTCGCTGAGCACAAAGGCATTACGCTGGAGGCGGCACTGATACACTGCGCCAAACATAAGCAGGATAATAAGTCGTATCCGTATATCAATTTAAGGAGTATTAGTAACAATCAACCCTACGCATTATCTATCATTCAAGAAATGGCAGATAACGAAACTCAAGGGTCGTTTAACAGCTATGGCATTAACAATGCGGCAGATAAGGTTACTGTGCCCCATTGGTAAGCCACTTATAAGGTAATGACGAATTACCCAAAAATTGGGACAAAAAACCCTTTTTTTGAGCTATTTAAAAACTTGTAATAAAATCAATCAGTTACATTAGGGCGAAAAACGGAGGGTAAAATAGGGTGTTTTGACCTCCACGCCTTGTTGTAACTAAATTTTTTGAGGTATAATTCCT # Right flank : AAAGGGGCTGTAGTAGATAAGCACTATGCTAGACTACTTTTATGAAGATAACCCGTTGTAAACTCAGTAAAAAAGTACAGCGAAGGCTGTTAGAGTTTTTCACAGCTGAAGTGACTGCTAGAACAGCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //