Array 1 1088-664 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMPI010000030.1 Ruminococcus sp. 1001262B_160229_C12 NODE_30_length_34588_cov_38.4278, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1087 30 100.0 34 .............................. ATCGAAAACTATGACAGAAAAGAAGAATGGACAG 1023 30 100.0 36 .............................. CAGGGATGTACGCTTAAAGGTTACAACGTATACTAC 957 30 100.0 36 .............................. ATTGCAGAACTGGGAATGAACGCAGGTTTTTATGTT 891 30 100.0 36 .............................. ACAAAATACACGTGGAGCAAGATTAAGGGAGAGCCG 825 30 100.0 36 .............................. ATCAAGTACGCCTCCTTACTCTGAACATCCAGTCCC 759 30 100.0 36 .............................. TACGATATTGGCGATCTGTGGTCTCAAGATGGCGGA 693 30 86.7 0 .......................G.GG..T | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 98.1 36 GTATTAATAGAACCATATTGGAATGTAAAG # Left flank : AGAGGTAAAGATGGAAGATAATACACCAGATAAATTCAAAACCACTTGGGGTCAGGTACTCGAAAGCAGGGATAAAAGTTCTGTGAAAAGAGTATAAACTATAAACTGGCATCTGCCTGGATGCCAGTAAAAAAACAGCAAACACTTTAACAAGTTAATTCGAGAAAGAAAAATGTCGACCTGTGATACAACCACTTGGGGTCAGGTACTCGAAACCCGGGATAAAAGTTCTGTGAAAAGAGTATAAACTATAAACTGGCATCTACTTGGATGCCAGTAAAAAATATTAAAGCACTTTAATAAGTTAATTCGAGAAAGAAAATTGTCGACCTGTGATAAGGAGAAAAGTGTGGGAGGTCGACAAAGCCTTTATATTAAGGAAAAACAGGTGATTTAATGGATCATAATAGAAGATTATGGGTCCCGAAAAAATAAGAAATGACAAGGTCGACAGAAAGTGGTAGAATAATGCTTATGAGAAAGGCATTTGTGGAAGACGA # Right flank : TCTGCTCTTGGGGACAGGTACTCGAAACTGGGGATAAAAGTTTTGTGAAAAGAGCATAAACTGGCATCAGAGCACTACTTGGGGTCAGGTACTCGAAAGCTGGGATAAAAGTTCTGTGAAAAGAGTATAAACTATAAACTGGCATCTACTTGGATGCCAGTAAAAAAATATTAAAGTACTTTAACAAGTTAATTCAAGAAAGAAAATGGTAGAATAATGCTTATCAGAAAGGCATTTGTAGAAGAACCACTGTAAGCGCAAAATAATTCGACGGATTGTGTTGCCCTAAAAATCAATCCATAATAATCATTAGAGAATGCAAGCATTTCACTTCATTTTCTCTTACCAGAAATGATAGATGCGAGCATTTTACTCTATTCAAGTTATGGAGGTATGCTCATGAGAAGCAAAAGAATACCTGCTGAAGAACAATACCGTCTCATCATGGAATGCCGTCAAAGTGGATTGACAGATCATCAATGGTGTGTGGAACATGATAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAACCATATTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 59519-60146 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMPI010000022.1 Ruminococcus sp. 1001262B_160229_C12 NODE_22_length_69113_cov_37.5588, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 59519 30 100.0 37 .............................. GAGGATAAGGCTTATTTGCAGGAGTGTTTGATAAAGG T [59548] 59587 30 100.0 36 .............................. AAAAGTAAAAAGAAAAAAAGTACAACTCCGGCATCA 59653 30 100.0 37 .............................. AGGTGGAGAAAACAGAGGATGTGTTAGCAAGTATTAT 59720 30 100.0 36 .............................. TCATGATTTCTGACTGTTCATAATCATCAATATCAG 59786 30 100.0 37 .............................. ATAAAATAGGAATAGCCAGAGGGAACATTGGTGCTTA 59853 30 100.0 36 .............................. GCCAATCACGCTGTTTAACGATTCTTCCGGTAGTCT 59919 30 96.7 36 .............C................ AAATCAAAATGATTATCTTCAATTGTCTTTTTCAGA 59985 30 96.7 35 .............C................ GAAATAAGGTTGTACACCAATTCCGTAATGTCAGC 60050 30 96.7 37 .............C................ GCAGTGACAGTTGTAGCTGCTGAGATCATTCTTTTGA 60117 30 90.0 0 .............C...T.......C.... | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 98.0 36 GTATTAATAGAACTATACTGGAATGTAAAT # Left flank : AAGTACGTAAACGGCCTTCCTCTTTATAGGATCAGCCAGGAATTCCTGCGGAATGACATCCATATCTCCAGACAGGTCATGGCAAACTGGATGATCCAGTGTGCAGACAGGTATCTGTGGACCACAGTGGGGTCAGGTACTCGAAAGCTGGGATAAAAGTTCTGTGAAAAGAGTATAAACTGGCATCTGTTTGGACCACAGTGGGGTCAGGTACTCGAAAGCTGGGATAAAAGTTCTGTAAAAAGAGTATAAACTGGCATCTACTTGGATGCCAGTAAAAAAATAGTAAAGCACTTTAAAACGTTAATTTCGGAAAGAAAATTGTCGACCTGAGATAAGGAAAAAAGAGCGGTAGGTCGACAAAGCCTTTATTTTAAGGAAAAACAGGTGATTTAATGGATCATAATAGAAGATTATGGACCCCGAAAAAATAAGAAATGACAAGGTCGACAGAAAGTGGTAGAATAATGCTTATCAGAAAGGAATTTGCGGAAGACGGG # Right flank : TTCGAACAAAAATGAAAGTAACTGTTGTTATTACTTGGATTTCGGTATAGAGAATGGGACGGGCTAGAGGTTAGATAAGATGAATGTAAAGGAATACTTTTACATTCATTTTTATCGCATCCAAATCCCTATTAATAGAGGAATGATTAATGCCTTGATAATTTAAAATATCTGTGGTAGCATAGTTAAAGAATCCTGATAAGCAGGAGGTGTGCTTATGAATGAGCAGTTGCTGAAAATGAATGGTTTATCGATGGAAATTCTGGATGCGTTGTCATTTGAGTCACATATGGGAATTCCATTGAAGAAGAATTTGCATTATTTTGATAAGGATATATTAATTGCTGAATTGATTGAGCTGACTGAGTGGTTGGATGAACTGGAAATCCTTTCAGATATTGCGCTAGATTATAGGATAAAGAGTTTGGATTCCATACTTTTGAAGTATGACCGTTACTATCCAGATCATCAGACGCGGAAAGTATTTAATGATATACTGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAACTATACTGGAATGTAAAT # Alternate repeat : GTATTAATAGAACCATACTGGAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //