Array 1 748-2634 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPAE010000025.1 Bacteroides fragilis strain 1001136B_160425_F11 NODE_25_length_44990_cov_39.4086, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 748 47 95.7 30 ...A......A.................................... GATTCGAAGATATGCAAATGTAGCAAGTAT 825 47 100.0 30 ............................................... CGTAACCGTTAGCTTGGCGTTATGCTTGGC 902 47 100.0 30 ............................................... GATGAACAATCTTTCACAAGCCTACTTAGA 979 47 100.0 30 ............................................... AAAGGATCAAAAATGGGAACAGGATTTACG 1056 47 100.0 30 ............................................... CGGGGTCAGCGGCCCATCTATCCATTTTGC 1133 47 100.0 29 ............................................... GTAACGACTGCCCCCAAAGCAACAGCTGC 1209 47 100.0 30 ............................................... AGGATAAACCGTAACTGTCTGACCATTTGA 1286 47 100.0 29 ............................................... TTGTGTATGCAAAATTCACACGTGCCACA 1362 47 100.0 30 ............................................... AGCACAGTCTACATCTGCAACTGCTTCTTC 1439 47 100.0 30 ............................................... AAAATCGTAAACATCAGCTTGAAATGCAGC 1516 47 100.0 30 ............................................... TTTGTGTATACAAAACTCACACGTGCCGCA 1593 47 100.0 30 ............................................... TATTTTTGGTGTGGCCGTTGATTCTTCTTG 1670 47 100.0 29 ............................................... AATATTATCAAGCGAAGAACCTTCTGTAT 1746 47 100.0 30 ............................................... AAACCATTCAAGTAACGACGCAATTGAGTA 1823 47 100.0 29 ............................................... GTACTATTGACGTATCCCGCAACGTAGCA 1899 47 100.0 30 ............................................... GAGTGCTTGAACTTAATGGAAAGCCTACAC 1976 47 100.0 29 ............................................... CAAACTTAGCGGTGGGAACATAATCATTC 2052 47 100.0 30 ............................................... AATTCATTCTTTCTATGATTATTGCGCTAA 2129 47 100.0 29 ............................................... ATAACCTGAAGCCGAGGAACAGGAGACCA 2205 47 100.0 29 ............................................... AGTAATCGTTATAAATCTTCTGATAGGCA 2281 47 100.0 30 ............................................... ATAAGCGGCTCGACAGAACGGAGACAAAGC 2358 47 100.0 30 ............................................... ACTCTTTCAGAAACGGAGATAGTTCAACTT 2435 47 100.0 29 ............................................... TCATTAGAAAATTGGGAATAACCACGGTT 2511 47 100.0 30 ............................................... AAAAGATCTTTTGAAGAAGCTACAGGTGTA 2588 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 25 47 99.8 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TTCAGGGGCGGAAAGAACAAAGCTTTGGCTTCGAAAAGACTTGTTATTTGGAAACAAAAGGTTTGATTTAACAGAGGGTTAAATCAAGTTATAGGAAGAGGAAAAACAAAAGGAGAGAAAGTATTGAGGATGAAGAAAATAGAGAAAAAGGGAGTATTTTCTGGGAAAAGGGATAAGTGCTGGTCCGAAAGGGATAGTTGTGATTAAAGCAAGTATGGGGGCAGGGAATTTTAAAAAGCAAGGTTGGGAATGGAAGCGGGAGGAGCTTACTGTTAAAGACCAAAGGACAAATTACAAAATATTATCCAATTAACAAACCGATAAACAATCTATTAAATGGTTATTCACAATTCGAAACAGCTTCTAATGGTAACTATATTTAAACCGTCTAATCAGATACACTTAGTAGCATACTTTTCAATTACTAAGTAGAGTACTTTTTAATTATTATCTACACCATCATAAACAGCATATACTATCTGATGAAGACAAAGCGATGC # Right flank : CTTACCCCGCATAACATAATGTTCTTCAACAAGTTAAGAATAAATTAGAAAAAAGAAAAAGAAGACTGTTTCCAACACAAAATCTCGCATTAATGCGAGATTTTGTATTCTAGAACAACTCCAATTGCTGTCCCGGCGTATTGACATCTTGCACTTTCTTTCCATAAAAAAGCTCTATATCTCCAAATTGTTTATCTGTAATACACATGATTCCGACATGCCCAAATTCTGGGAGAAATGATTTAACTCTTTTTATATGTACTGCTGCATTCTCACTACTGCCACAATGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCCTTTTGTAGATTCTTTCTGAAATCGGCATAAGCCTTTTTTTCTTTCTTAGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCATTAAAACGATCCATAATCTATCGTTCGGGATAGGAAATTCTCCGAAGCTCTCCATTGAAACATTTATAAAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //