Array 1 128329-129837 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNDF010000016.1 Parabacteroides goldsteinii strain D55t1_190419_C9 NODE_16_length_139690_cov_28.5365, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 128329 37 100.0 37 ..................................... GACTTGAGAAATAATATGTTACAAGTAATTGAAAATA 128403 37 100.0 35 ..................................... AATGAAAACTGGTATGTTAACATTGTGGCTCAGCC 128475 37 100.0 38 ..................................... TATCATGACACGTAAACAATTCAGTAAAGAGCAACATC 128550 37 100.0 36 ..................................... GTGGCTGAAAACGAAACAGCAAACGTTGAGAACGGC 128623 37 100.0 37 ..................................... TTGATCTATCTTGTGCTGATGTTGTTAATGATCGTGA 128697 37 100.0 34 ..................................... AACTATTTCTCGATGAACATGATAAAATTAACAA 128768 37 100.0 37 ..................................... TGTAGTGAAGCATTAGCTGAGAGACTAACAGCCAACA 128842 37 100.0 36 ..................................... ATGTTGTGTAATGTGATTACTCTGGAAGCTAAACAA 128915 37 100.0 37 ..................................... AATTAAATTAAACTTAGAATTATGGCAACAAGTAAAA 128989 37 100.0 35 ..................................... TAATGTTGCTAACGTTGTTACTATCGACACAACTA 129061 37 100.0 33 ..................................... GTAGATAAAGCTTTTAAGAAAAAAAGAAAAAGA 129131 37 100.0 35 ..................................... TTGTATAACAACAGTACTCGTATCTTTGATGTAGA 129203 37 100.0 36 ..................................... GCAGTAGGGGCGTATTGCGCTAACAAAGTGTTTGAT 129276 37 100.0 40 ..................................... TCCGTAGTTAAAAAGGCAATAAAGGATTCATTATCTAAAA 129353 37 100.0 40 ..................................... AAGTTCCAGAAACAACGTTCTAAGTGTAGGGTAATGTGGT 129430 37 100.0 37 ..................................... TGCTAATGGTACTATTGTACCAGTATCATATTATGGT 129504 37 100.0 38 ..................................... TTGTATTAATGCTAAGGACGTTAGTGTACCTATGCCAT 129579 37 100.0 37 ..................................... ACAAACAGAATTGTAATAGCAAAGTACGTGCTACAAT 129653 37 100.0 37 ..................................... GGTAAGTTCACGCATTCTTGCCGTCCTTTCAGTAGGA 129727 37 100.0 37 ..................................... AGTAGAGCAGATGATATCTTAGTTGAAATTATTAAAG 129801 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 21 37 100.0 37 GTCTTAATCCTTATTCTAATGGAAGTTACTTTCTGAC # Left flank : CAGACCAATCATCTCTTTCGTCTTCCCGTCTTTCACCAAACCGACCAATTGCTTTGTATAAAGGGGGTTGACGGTCGTGACGTTGCGAAGGTCTGCGGGCAAGAATGCGGTTATTTGATAGCGCAAGCATTCGCCCGCCCTCCGGCAATCGCAATGGAAACAGTGGGCGAACCGACCGGGCACTAAGGTGTAATCAAAGTTTTCCTGCATAAATTTAAGTGTTTACAGTTTTGTCAAATATAGGTAAAAAGAGCAGATTCGCAAACTTTTGGTGTAAAAAAGCGCGTATAAGTTGCAGGAAATGGCTTTTTTGTTATTCTTTCGATTTGCTACAACCACTTGTGAAAACGATATATTTCAATTGGTTATAACAGGGAGAGGTATATATTGTAGGAAATGCAGAAAAAAACATTGGGAACATCCTTGTTTTAATGGATATACATCTGATTCAACCAGAGCCAAAATGAAATGGAACTCTCTGATTTGGCTTTCTGACCCTT # Right flank : CAGCAATATTTATAATTCACTGTATTACAACCTTATCCCCTGAAACTCTTTCTAAAAACGCTCTTGCATTCACAATTATTAACCCATTTCTTAGGGTTTGCAAAGTTAGCCATTATACCAATACGTCAAAGAACGTCACTGCTAATATTTCATAAAACCAATATGCAGGCCTATATATGCCGACTAAAAAAACAATGTATTTTTATTATGCATGATAACATCCAACTCCACCTTTTGACCGATTACCTTCATCGAACGTAAATAATCGGCGGAAATCGGAACAATTAATATACTATCATTATTCTCATAAGCCGCCTGCACTTCCGCCAAATCTTTCCGTATGCCATCATACTCTGACATCGCCAAGTCAGCCAAAAAGATAGACCGTTGCACACGCGTACAACCTTTTCGTTGTAAGTATTTAACAACTTGATGACGAACCTTATCACTCTCGATATCATACATAACAAAAAACAACATATTAGATGCCGGTCTATTTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTCTAATGGAAGTTACTTTCTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //