Array 1 729054-726862 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI392031.1 Oxalobacter formigenes HOxBLS supercont2.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 729053 31 100.0 34 ............................... ATCGTCAGGTCGTTTGCGTCCTGCTGGTCAAATC 728988 31 100.0 33 ............................... GCCGCCGATACCATAGTATCCTGTACTTGCCCC 728924 31 100.0 36 ............................... AATAGATGATGTGTTTGGGGATGTCGATGCAAACGG 728857 31 100.0 35 ............................... ACGCTGGCTGGGTGTATGAAACGCCCACCACATCA 728791 31 100.0 36 ............................... ATCGGATTGTGGAATTTTTGCGACGATGGCGGCAAC 728724 31 100.0 34 ............................... AGGCGCGGTTCGTAATTTTCAATCAGCCATTCTG 728659 31 100.0 34 ............................... CGTCTTTCGCCCGAATTGTGAACTCTTTTACTGC 728594 31 100.0 33 ............................... ACGGTTAATATCAAGCAGCTTTTGTAATGTCGG 728530 31 100.0 35 ............................... TATAATGCATACATCGCGTCCATCTTGTGGAATTG 728464 31 100.0 34 ............................... ATTGTGCTTTCCTGCTCCACGCTCCACCCGTCCC 728399 31 100.0 34 ............................... TTCGCGGCGCGTGGTCATGCGGTCAAGCTCCTGC 728334 31 100.0 34 ............................... CTTCGCGGCGCGTGGTCATGCGGTCAAGCTCCTG 728269 31 100.0 34 ............................... TTGTTGCGCCAAGAATAATAATCGTCTGTCCGGG 728204 31 100.0 34 ............................... CCAACCCCATCATGTTAAATACGGATGGAAATAT 728139 31 100.0 34 ............................... CGCTCCTTGCACGCGCTGAATTTTTGTTTTTCTG 728074 31 100.0 35 ............................... TCCGACGGGTCTGCTTTATAATCGACAGAGATCAA 728008 31 100.0 34 ............................... CGTTTTCCAGCGTAAAACTAATCCACGCGGGCCA 727943 31 100.0 39 ............................... CCCGTTCTTCCCCCAGCCGACAACCTCATACTCCAGCCG 727873 31 100.0 34 ............................... CTGAAATCCTTGAGGTATTCTTCGACGTAATTAT 727808 31 100.0 35 ............................... TTTTCTGAACGAACTATCTATAACAACGTCCAGAA 727742 31 100.0 35 ............................... AGCCTCGACATTTTCCGCCTCCTCAAGTGTGTTAA 727676 31 100.0 33 ............................... ATCGCCATAGCCGAAGCCTTTTTGATGTCCATT 727612 31 100.0 34 ............................... CCGCTCCCACAAATATGCGCATGCCGATAGCGTC 727547 31 100.0 35 ............................... AAAATAACCCCAATATCGAGCTGGTTTTAGATATT 727481 31 100.0 33 ............................... ATCCGGATTCCGTCGCAAATTTCTGCCTGTATC 727417 31 100.0 36 ............................... CGCGTTAGCGGTTGCCAAAGAGGCGGTATCTTCCGG 727350 31 100.0 33 ............................... GTCTCCGATAACGTATCGTATTGGCATGGATGC 727286 31 100.0 35 ............................... ATTGATCAGGCTCACCAGCGTGGTTGCAAGATCCA 727220 31 100.0 35 ............................... CGGGATCTCGATAAAACACCCGGCAGGGTTTGCTG 727154 31 100.0 34 ............................... CACATCATTGTGTTTTTGTCCGCGTGCCACATAT 727089 31 100.0 34 ............................... TCAGTTTTTCAATCGCCGCCAGAATCGCCTTTCG 727024 31 100.0 35 ............................... TCGATGATGCTTACGGCCTCATTTATCGCGTATGC 726958 31 100.0 35 ............................... CTTGCGTTGTACAGCACTTCGTTGGTCAGTCCGTC 726892 31 74.2 0 ..........T..C......C.A.C..GCG. | ========== ====== ====== ====== =============================== ======================================= ================== 34 31 99.2 35 GTCGCACCCTCACGGGTGCGTGGATTGAAAC # Left flank : CCTCACCATCGACCACTTCATGCGGATCAATGCGGAAAAAGACACCGATGGACGCCTGCGCGAACTGGCGTTTGCCACCGGATTCGACAACGCCTGTTCCATGGCCGACGCCATCTCCGAACTCAAATACCGCACCGGCCTGAAAACCAGCCTTGCCGGATACGACCTGACCGACGACCAACTGGAAAAACTGGTTCAGGCCAGCCTCCACCCGAACCTGCAAAACAACCCGGTCCCCATTACCGAAGCCATGCTGCGCGATCTCTACCGCGACCTGCGTTAAATCGCCGCCATCCGGACGCCCGCCCCGGAAAACCGGAAAACGCGGGAACCTGAGGCTCACAGCCTCTCCCCGGTGCGGTGCTCGCACTGGCAAACCCTTGAAAAAACACGTAAAATCGGAACCGGTCGGGAAAACCGTCCCGTTTCGCGTCAAAAACGGGGAGGTTCCCGCATTCTGCCCCTGAAAAGCCCGGTCCATCAGGCTTTCCAAGGGCACA # Right flank : GTGGAGTAAAACCCCGGCTGTCTGTCGCGAACCGCCGGGAGTACGGCGGCTGCGCCACAACAGGTGCGCTGGCGGAAACGCCAAACTGTCCCGACTGGTCAGCGCTCAGGCGTTCGCCGCGTTTTACAGCCACACGGATTGAAATTCTTCCGGACAGCCTGTAGAGTACATCCTGTACCGCTACACGCGCCGTGCGCGGACGGATTCGCCGCCGGCGTCCCGCCATTGTCTCCGCGTGAAAGCGCCGGCTTTCCGGGCGCCAGTCCCTCTGAAGCGGAAAATGAAAAACCCCCGGCATGGCAGCGAAAGCACGCTTTGCACGACCCGTTCCGGCCGCCCCGGACGCAGAAAAAGGAAGGAAACGCAATTGGAAAACGAATCTGAAGAGTTAAGCAAGAAAACCCGGATTATCATCATGGTGGCCGTTGCCATAGTCATCGGGCTCATCCATCTGTTATACATCAGGCCGCGTTACGGCGATTCCCTTCCAATGATCCTCT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 942207-942904 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI392031.1 Oxalobacter formigenes HOxBLS supercont2.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 942207 33 97.0 33 ................................C AAAATAGGCGGTAGGTTATGAAACAGACAACTA 942273 33 97.0 33 ................................G TATCGGCTCCATCGTCACCAGTACCGGCACCGG 942339 33 100.0 34 ................................. TTGCCAATTATGCCCGCCTGTTCCAGTCTGTCCG 942406 33 100.0 35 ................................. CGCGCTGAATATACAGGCTCCGGCGCTCTTGTCTC 942474 33 97.0 35 ................................G CGGACTGTATCGCCATTTACGAACAGTCGTACCGC 942542 33 97.0 32 ................................A ATTTCCGAGCAAAGGCATTGATGCTCAATCCC 942607 33 100.0 33 ................................. CTGACGATGACCAGGAGGCCGTACTGGACGCCG 942673 33 97.0 35 ................................A CCGATTAGAAGCCCGACTATGCAATAAATCAACTG 942741 33 100.0 33 ................................. CCGGCCAAAGACCTTGAGCGGACGCTAAACCGG 942807 33 97.0 33 ................................G TCCCCGCACCGGATGCTGGAGACGAGGAGAAAG 942873 32 84.8 0 .....................C..GG.-..C.. | ========== ====== ====== ====== ================================= =================================== ================== 11 33 97.0 34 GTCGCACCCCTCGCGGGTGCGTGGATTGAAACT # Left flank : TCAACACGGAAGACCGGCAGGGACAGAAACGGCTCCGGAAAATAGCGAAGCTCTGCGAAAACTGGGGACAGCGCGTCCAGTATTCGGTTTTCGAATGTCTTGTCGAACCGGCGCAATGGACAGCCCTGCGTGCCGCTTTAATCAATTGCATGGATGAGGAAAAGGACAGCCTGCGCTTTTATTTTCTGGGCGCCAACTGGAAAAACCGGCTGGAACATGTGGGGGCGAAAGCCGCCATTGATCCCGAAGGGCCGCTCGTTTTCTGAAAACCGCGGCATTGAAAACCCGCTTGAGACAAAGGAGACCGCTTACGAAAAAACAAACGCGAGAACCAGAGGTTCACAGACTCTTCCCGGAGAGATGCTCGCACGCCCAAGTCTTTGAAAATAGGGCGAAAACGGTTTCCCTCATAAAAAAAGGCCGTAACGGGCCAGAAAAAAGGGGAGGTTCTCGCATTTTGCCTTGCAAAAGCCCTGTTCATCAGGTTTTCAAAAGGCACA # Right flank : TCCATTTTCCGTCCTGTCGTCAATACCCGTTTATGAACTGCCCCGATTGCCCATGAGCCAATCGGAAGCGCCATTTCTCCGGACAGACCGTACAGGAAGCCACGCTGTTCTTTTTTGCACGCGAATGGAATCGCCTTTTTTCCGGAAAGCGCCTGCCGTTTCCGATTGCCACCTTGCCCGGGCAGGGACGGCTTTGCCGGCAAGGGTGGCCAGCGGCGAAAGCGGCGGCAGCGGTTTTTTCCCTGCTGACAGCCTGTTTTCGCCTTGCCATTTCTTTGAAAAAGGACTTGAAAAATATCAACGGGAACCCATTTTACAAACAGGGACGGGATTTTCCATCAGGTGAAAATCCCGGTTTCGGAACCTCTTTCCAATACAAAAAGGAAGGGGAGACGATATGACAGACACCTGAAAGGCCAATCCGTTTGGATGGCTTGACATAATGGAGGAATAGACTATGTTACCCAGCGTTTTTGGTGAAAAACTGTTCGACGACATGT # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGTGCGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //