Array 1 1100-6954 **** Predicted by CRISPRDetect 2.4 *** >NZ_VAFY01000026.1 Acinetobacter baumannii strain Aci00848 isolate Aci00848 Aci00848-merged_contig_26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1100 30 96.7 30 .............................A CTGAAAGAGTAACTAACTGTTTAAAGAAAC 1160 30 96.7 30 .............................A TTCCTATTTATTTTGAGCCTAATACACCAA 1220 30 100.0 30 .............................. TCCAACGAAATTATGACGCTGACAAGTCTC 1280 30 100.0 30 .............................. CACAAGACCATACTCACGAATAAATTGTTT 1340 30 93.3 30 ............................AA CAGGAACTTTTGCAGGTCGTAGCCAAAGAA 1400 30 96.7 31 .............................G ATTCCGAATTATTTGCGGATGAGAGCAGTAA 1461 30 93.3 30 ............................AA CAGGAACTTTTGCAGGTCGTAGCCAAAGAA 1521 30 96.7 30 ............................A. CGTCACAGCGCACTGGTTACTTAAAACAGG 1581 30 96.7 30 ............................A. CAACAACTTTATTAGCCTTCACAAGACCAT 1641 30 93.3 30 ............................GA TACGGGTAAACCGTATGAATGGGTTGATTT 1701 30 93.3 30 ............................AA AGATATTACTGGTGTATAGAGCTGAAGATT 1761 30 96.7 30 .............................A ATTCACTTGATGCAGGTGAATCAATATTAA 1821 30 100.0 30 .............................. TAGATACAGGCGTTGATTCTGCAAAAGTGG 1881 30 96.7 30 ............................G. TACCCAACCCTTTATCAATCTCTCGACCAA 1941 30 93.3 30 ............................AG GGTGCGCTTGCACGTCAAGAATATCTTGGT 2001 30 93.3 30 ............................AA CGAGATACTGTTTCAGGAGATTCACCCAAA 2061 30 100.0 30 .............................. TTTTTAAGTGTTTCATCCACAACATCATAA 2121 30 93.3 30 ............................AC CATCAATCGTGAAGCATCAAGGCGATAAAG 2181 30 96.7 30 .............................G CAAGACAGCTATATAGAACAGTTGGAAAAT 2241 30 96.7 30 ............................A. AACTTGCTTGTACGTTTCTAATCTTCAGTT 2301 30 93.3 30 ............................GG TGGAAAATGTACATAGACATTGCACCGAGA 2361 30 93.3 30 ............................CC CAAAGGCTCAAGAGTTGAGCGCGTCAACTC 2421 30 100.0 30 .............................. GCGAGTCAAGCCGACAAAGTAATCGCTATG 2481 30 93.3 30 ............................AC GGTGTCAGAGTTTTAGAACTCAATGATGGC 2541 30 93.3 30 ............................AG TTAATACCCGTTGGCCATATTGTTCAGTTT 2601 30 100.0 30 .............................. AGTCGCATTAGCGCAAAAGCTACGTGGATT 2661 30 96.7 30 .............................A ATGATGAAATCGATGAAATGTGGCGCTATG 2721 30 100.0 30 .............................. GTTGCAACACCGCCACCGCTGTGCCTTTTG 2781 30 100.0 30 .............................. CAATGTGTTTAAGATCGGGTCAAAAGCTAC 2841 30 93.3 30 ............................CC CAACTTTTTAAATATTTAATTCTTATAAGA 2901 30 93.3 30 ............................AA CGAGAAATTGGAACTACAAAAGAACCAAAA 2961 30 93.3 30 ............................GA TTATTCTGGTTATAACTTTGTCTGTGTAAT 3021 30 96.7 30 ............................A. CTTCCGCAATGGCCTTTTTGAATGCTTCAT 3081 30 93.3 30 ............................AG CCACGTCAACAGCAGCATTGGCATTAGTAA 3141 30 93.3 30 ............................GC TAAAGGCTAAAGCAACCAAGGTGAATCTTA 3201 30 93.3 30 ............................GA CGAGCAACACGTCAACGAACTCAAAGCAAA 3261 30 93.3 30 ............................GA CATGGCGAGTTGCAGCAGGAATACCATAAT 3321 30 93.3 30 ............................GA GTAATGCAGCACCAACAGCAGTAATCGCAG 3381 30 93.3 30 ............................CA AACGTGGGTTACATCTAGTTGCCTGAGGAG 3441 30 96.7 30 .............................A ACTTAGACTGAATATCTGATGCTAAAGATT 3501 30 93.3 30 ............................AG CCGGTGTTGATCTGATATGCGTTAGCCATT 3561 30 96.7 30 ............................A. ACGCGCCAAACATGAATGGGTTTAAAACGT 3621 30 100.0 30 .............................. TGTGCCTCAATATGATTTCAAATATGGTTT 3681 30 93.3 30 ............................GC CAGGGGCAACATACCGCGCTAACGTTAGTG 3741 30 93.3 30 ............................GC AGTATTGACTGTCGGACTTGTGACAACCTG 3801 30 93.3 30 ............................GA CAGGAACCGTCACTGAAAGCGCACAGGCTC 3861 30 100.0 30 .............................. GTAACAACTTTAATGGAGAAGCCTTAATCT 3921 30 96.7 30 ............................A. AACGAGAAGCGTTGCGTAGACTTACAACTC 3981 30 96.7 30 .............................C TTGTTATTTCTGGTAATAAATATCAGAACA 4041 30 96.7 30 .............................C AAATCTAAGCCATGCTCATTAGGCATAGGT 4101 30 96.7 30 ............................A. CCTGTCTCTTGGTCAATCTTGGCACGTAGG 4161 30 96.7 30 ............................A. TACCGACTGATTGTTGAGTGGCAATGTTAA 4221 30 100.0 30 .............................. ACACATGAAGTCAGCAAATGCCACCATGTT 4281 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 4341 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 4401 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 4461 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 4521 30 96.7 30 .............................G ATGCGGGTTGTCCACCAGTTATGACTACTT 4581 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 4641 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 4701 30 93.3 30 ............................AG TGAATGGGATTTATTCGCAAGGTGATATTA 4761 30 100.0 30 .............................. GTTTCAGTTGCATAGTCAAACGATGAGAAC 4821 30 96.7 30 ............................A. TAGCAGGTGATTACGCAGTCTTATCTAATG 4881 30 96.7 30 ............................A. TAAGCAAGGGCTGACCCCGACCGCCGAGCA 4941 30 96.7 31 ............................A. TGACTTACAGCGTTATGAGAGATCCCTAGTT 5002 30 96.7 30 .............................G ATGATTGGATAGAGATTCATGCGTTAGATT 5062 30 96.7 30 ............................G. AAAAAAGAACATTTCCCGCCAAAATTGACG 5122 30 100.0 30 .............................. TGGCAACCAGTCGCCCTATGCGACCTGATA 5182 30 96.7 30 .............................G TAAAAAAGTTTAATAATTTTTTCAGTGAAT 5242 30 96.7 30 .............................A CAGCAATAACGACCAAACCGATATAGGTAA 5302 30 96.7 30 ............................A. ACGAACATCATTTACTTGCTGAAGTTGCTT 5362 30 96.7 30 ............................A. GCTCTCAATAATTCGCAAGTAAAAGTGGAT 5422 30 93.3 31 ............................AA AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 5483 30 96.7 31 .............................G CATCGAAGTCATAGAACGCTTTGAGTTTCCA 5544 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 5604 30 96.7 30 .............................C CATTCTCGCTAAGTGGCATCACACGCGATG 5664 30 100.0 30 .............................. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 5724 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 5784 30 93.3 30 ............................AG TTGATATGATTATTAATATTAAAGTTGTTT 5844 30 96.7 30 .............................G TGCCCATTCCCGCAAACACGGCGCAACGCT 5904 30 93.3 30 ............................CA TGACCCAACCACGTAAATTCATACCACACG 5964 30 93.3 30 ............................GC TCCGTAATTAATCAAGAAATAATCAAATTT 6024 30 93.3 30 ............................AG TAGTTGCACCAGACTCCGCACAATCTAAAA 6084 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTATGAAT 6144 30 96.7 30 ............................A. CATCGAAATTTAGTTCTAATTCTTTAATTT 6204 30 93.3 30 ............................AG TCTTTAATGTCGGCAACATGCTGTGCAAAA 6264 30 96.7 30 ............................G. AAATATGCTGCTTTAACCCGCCAAACGAAT 6324 30 96.7 30 .............................G CATTAAGACGAATGCGGGCAATTGGTAATG 6384 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 6444 30 93.3 30 ............................AC CAGAAAAGCAGAGTAAAGCTTCACAGCCAT 6504 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 6565 30 100.0 30 .............................. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 6625 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 6685 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 6745 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 6805 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 6865 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 6925 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 98 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCTACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //