Array 1 9676-10853 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRBA01000009.1 Lysinibacillus fusiformis strain SW-B9 contig9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================================================================================================ ================== 9676 32 62.5 34 AGTCGCTCT.CTC................... TCTCGATACGCAGCAACTTTTAACTCCAAAGCAT 9742 32 96.9 34 .............G.................. TCATAATAACGGAATGATTCTACTTGTTTATTAC 9808 32 100.0 35 ................................ ACCCTACCCATAGTCTTTCAGCAATTCAAAGATTA 9875 32 93.8 34 ...........T.G.................. GTTTGGTGCTTTTTTTGGTTAAATACTGCCTCCA 9941 32 93.8 34 .............G.....T............ ACCCCAATGAGCTGTTTTTCAAAATCCACCACAT G [9958] 10008 32 84.4 35 ..........AGTT...G.............. GCAATTTAAATATTTACTTAATGCTACCATCGTTT A [10024] 10076 32 87.5 34 ..........AGC....G.............. GTTTCGATGTCATTTAAAAAGGTTAAATAAACTA A [10092] 10143 32 100.0 34 ................................ ACACCAATGAGCTGTTTTTCAAAATCCACCACAT 10209 32 84.4 27 ..........AGTT...G.............. ACCCGAGTAGGCTGACGGTGGGCTACA A [10225] Deletion [10268] 10269 32 87.5 34 ..........AT.G...G.............. ATGTAAATGAATAGATCGTACTAATGCGCCACCA G [10280] 10336 32 78.1 124 ..........AGTT...G.T...........A TGCGAATATGTCAAGAGTACGTTTGTTAGACAATATACCTGAGAAAGTAGGGTTTAGATTTGTTGCTTTTATTTCAATCAAATCGTTAACTTCTTAAGGGAACGGGCGTAGCTTAAGTATTTGT A [10352] 10493 32 75.0 34 A....C..AT.T.T.A.G.............. CTCAAGCCTTTGTTATTTAATTAATTGTGATTGA G [10503] 10560 32 87.5 33 ..........AA.....G......G....... TCAGATTACTATTAGATTTGAGAAAAAAGTATT A [10576] 10626 32 78.1 34 .........TG.T..A.G.T...........C ATAGATGGAAAACGTGCTGCCCTTTTTAGTTTAA C [10639] 10693 32 71.9 28 .........TATTT.A.G...C..G....... GCTCGGAACGGAATTAAGTGTTTATAAT 10753 32 90.6 29 ........T..T.G.................. GACGAAGATTTTAAACTAGATATTTATTC A [10763] 10815 32 59.4 0 ...CT.T..T.GTGAA.GA.........C..A | GGTGAAA [10825] ========== ====== ====== ====== ================================ ============================================================================================================================ ================== 17 32 84.2 39 GTCGCTCTCCTCAAGGGAGCGTGGATTGAAAT # Left flank : TGTAAATTACGGGCTTTACGTTTGCTATGGTTCAATTAATTCACAATTGGCACAAGACACGAAATTCTCCGATAAAGATGCAGCTCTACTAAAGAAAATCTTATGTTCCATTTTTGAAAATGATGTGTCTGCAGCTCGCCCTTCAGGGTCGATGGAAGTTCATAATGTATATTGGTGGGAACATAATTCACCTTTAGGTCAATATTCATCAGCAAAGGTACATCGGTCCTTGGAAATCAAACAAAAGGTGGAATCACCTACTTCTTATGATGATTTTGAAATTAAGGTAAATGAACTTGATGGATTATCGGTGGAAGTATTACCAGGATACTAATATGATGGGGTGCGAATCATTAATAACCATAAATTCCTACAATCATTCGCACCTAAAATATCGATTCTGAAAGTTTTTATAGATAAGTATCCCTTAGTAGTACTTACTTAATATAACTGTTCTAATAACATTCTAATATATATCTTCAATTTTAATATAAATTTGA # Right flank : ACTAGCTAGGATTAAAGGACGTGGCTCATAGTTAAAAGAAGGAGAATGGCGATGACACTCGGAAAAGCATCTGAAATTAAATTTGCATTAATTGCAAGTAATGGAAGACAACAATTACAAGAATGGTTAGAAGAAAATAGAGATGTGGAAGTCTTAGATATTAAATTTGATTTTGATAATTATCCGAAATTTTTAGTTATTTATTGAGACAATTAGAAATGTTTTTGAACAAATATATATCATGAGTTCTTACTGAATAATTGAAAGATATTGAGCAGGAGGATGAAGAAAAATGAAGGCTATTGAAGATTTAGAAAAAAGACTTAGAGGTGAAATGGCTTCGAGAATGGATGATCGAGATATAGTAGACATTCTCGAAGTTCTTCAGGGTGCTGGAGTAGAAATCGAACGTTTAAATCAAGTAAATACCCAGCTTATGTTAGCAACATGTCCTATTTGTGATGAACAATAATTACTGCACAATATGAAATTTCGAAAAT # Questionable array : NO Score: 7.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.21, 5:0, 6:0.25, 7:-0.50, 8:1, 9:0.19, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCAAGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.63%AT] # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [7-25] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //