Array 1 225348-227883 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXYR010000002.1 Mogibacterium timidum strain W9173 HMT-042_W9173_contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 225348 35 100.0 37 ................................... CAACATGATTATATCAAATATCCAAAAATATCTATCT 225420 35 100.0 35 ................................... CGTAAAACTTATATCTGTTGATGATGGCTTTACAT 225490 35 100.0 37 ................................... TTGCAGGTTTGATAGACATACAAATAATCCTAAGCTA 225562 35 100.0 35 ................................... CTGCTTAATAACTAACTTTACGAAAGAAGCATTGC 225632 35 100.0 36 ................................... AAAAATTAGAATCATATTCACCTGTCTTTAAATATT 225703 35 100.0 39 ................................... CAAGAGGGCAAGGAGAGATATGCTAACTCTATCGTTGAG 225777 35 100.0 37 ................................... CAGCATATCCTGCAACTATTAGCAAGTCGCCATATGG 225849 35 100.0 37 ................................... TAGATGAACTCGAACCTGTTAGCAAATTTAGGATTCT 225921 35 100.0 33 ................................... ATCTGCACAAGAGTTCAACAGTTTACCATACAG 225989 35 100.0 37 ................................... TAGATGAACTCGAACCTGTTAGCAAATTTAGGATTCT 226061 35 100.0 39 ................................... TAGACTTCTTTGGAGGTTCTTCTTCCTCCTCATCATCTT 226135 35 100.0 38 ................................... TTTAAAGGATTTGTGCTAGCAAGCAGATATGCTAGGGA 226208 35 100.0 37 ................................... TCTGTGTACCAGTCGCAAATACTTGAGAGGATTGAAA 226280 35 100.0 34 ................................... AAATGCCGGGAGAATATACGGCGAGCCGCTTCCC 226349 35 100.0 33 ................................... TTTTCCTTCTTCCCTAACGATTTCCATTTGTTT 226417 35 100.0 38 ................................... CCGCTTAGGTCTACTCCACTCAGGTCCGCGTAACTTAG 226490 35 100.0 38 ................................... CTTTCTTCTAGATCCTCTATAAGAGAAGCTAGAAACTT 226563 35 100.0 36 ................................... TCTTTGTTTTGATTTAACATAGATATGACCTCCAAA 226634 35 100.0 37 ................................... GTGCTGTCGTATAGTTGATTAACTATATTATGAGACT 226706 35 100.0 39 ................................... TGCGCACTTCGCTGAGATATACATCAGGTCCTCCTGTCC 226780 35 100.0 38 ................................... TCTTAAAGACTCAGCACTTATTAAGATGGTTGCTAACT 226853 35 100.0 36 ................................... AAGGGCAACAGTTGACTATGATTATTGTACGAGCTG 226924 35 100.0 37 ................................... TTACCAAAACTTCTTCATTGTATTCCGGCAAATTATC 226996 35 100.0 37 ................................... TATTGTGTCTTCGTTTCCAAAAGCAATTCTAATCTTT 227068 35 100.0 38 ................................... GCTATCCAGCATATCAAGATATAGGTTATTATGATGGT 227141 35 100.0 35 ................................... TTTTTCATTTAGGCTCATTGGTTCTAGTTTAACCC 227211 35 100.0 40 ................................... AGTTGCTCTACGGGAAGATATCGGCTTTGTGGCTGGGTGT 227286 35 100.0 37 ................................... TTTTCTTTAGTGTTTTGTGTTAGAAATATGAATTTAA 227358 35 97.1 38 ........................T.......... CTGATTCGCATATTCGATTAATTTGCTGAGTTCTGCTT 227431 35 100.0 34 ................................... TTGCGTTAAATCTGCACCTAGTCGCTTGTTGTAT 227500 35 100.0 34 ................................... AATCCGTAAATTTCCATTTTTTTCTCCTTTTCAA 227569 35 100.0 36 ................................... CATCATTCGTGAAGTCGAACCAATCCTCGTCATCGC 227640 35 100.0 36 ................................... CTTCTTTTCTACTTGTCATCCTCCGGGTACTCGTAG 227711 35 100.0 32 ................................... TGTGAGAACGAGGCGAAATGGCATTATCTCAT 227778 35 100.0 36 ................................... TTTTTGAGTATTTAACGAATGTCATCTCACTACCTC 227849 35 88.6 0 ..............................GC.CT | ========== ====== ====== ====== =================================== ======================================== ================== 36 35 99.6 36 GATAGAAACTTAGTTCCCCGGTAGGGGACGAAAAC # Left flank : GATTCAACTGTTTTTAAACACGACATATCTTATATAGAGGGGGCAATTGAGCAGTTTTTGACCAACTATAATGAAGAATTTCTTGCTAAATTCAGAGAAGAGAAAGTTTATAACGGAAACATTATATATCTTGGCGGAGGTGCGGGATACCACACCAAGACAGCTATAAGCGCTCTACTGAAGAATGATGCAAAGAAGGTCAAGATAATTGGAAATATAATAAATAACACAGTTGCACGCAAGAAGAGGGATGAGCATAGACATTATGATGATTATAAATTAGGAGTATCACCGCATATTGTCAAATTAACAGAATATGATGGAGAACTCCTACAAATGGGTCCATGCTATATCGATTTCTCTGAAGTTTAAGCCGTCACTGAAATTTCAACGAATTAGCTGAGTTTTTGTTAACGTACTGGGGATAATTATGTATAAAGTAGATTTAAGCCGCAAAGTCTATATGAAGAGCTTGAAAATACTGTTATCCAAGACACGCT # Right flank : TACAAATTCTAATGATTATAAGTATCTTATAGATAAAATTATTTTCACACATGGAAAAGAGTATTGTAGTGGGATAGAATCAATAAGAGATGTTGGAGATTAGTTTATAACTGTGCAAGCATATATGATGGAGGTGGATTATGTCGCACGTTTATGTTACTACCGGGGAGACTTCTGTTGGTATAGATGGCGGACGAATTACTATCAAGAATAAAGATAATCTTATCAGAACGATTCCCAAGGAGACAGTTGAAAGTATCAGTGTATTTGGTAATGCAATTTTGACTGCAAAATGTATACAGTTTTGCCTAACTAATGGTATATCGGTCAGCTTTTTTTCAGGTAGGGGCAAATATTTCGGAAGACTTGAGTCTACAGCTCATCGTAAAATAGAGGTATTAGAGCAGCAAATTGATGCATTTAGGGATTATGAATTGTGTCTTGAGATATGTAAGCGTATAGTATCGGCAAAGATTCGCAATCAAGAGATTGTATTGAGA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAGAAACTTAGTTCCCCGGTAGGGGACGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 327859-328285 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXYR010000002.1 Mogibacterium timidum strain W9173 HMT-042_W9173_contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 327859 30 100.0 37 .............................. AAATATTTGCCATTACCAATAGGTGAGAAGAACTATG 327926 30 100.0 38 .............................. TTTATCTGCAGGCTTGCTTCAATTGACTTAGGGAGACC 327994 30 100.0 36 .............................. TACCTAGCTGAGGGGAGAAAGCACCAGCTAACTTTG 328060 30 100.0 37 .............................. GAGACTAACGGGGATTATGTACCGTCAACTCACAAGT 328127 30 100.0 34 .............................. ATTGATCATAGATTGATTGATACGGAAACGCTCT 328191 30 96.7 35 C............................. CCTAATCTACTAGCGGCAGTACATCGTCTGGATCA 328256 30 96.7 0 T............................. | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 99.1 36 GGTTTAATAGAAGCATATTGAAATGTAAAT # Left flank : TTATAAGGACATTTACAGCATTGCGAAAAAGAGCATTTATATCGTTGATAACTATATTGGAGTGAAAACTTTGGTCTTATTAAAGGATGTACCTTCATCCGTAGAGGTCATTATATTCAGCGATAACATCGGCAAAGGACTCCATACCCTTGAATATCAGGATTTCTGTCAAGAATATCCGTTTAGAAAGATAACATTCCAAAAATCCGGTGGAGAGTTTCATGACAGATACATTATTATCGACTGGAATACCGAACATCAGCGAATCTATCATTGCGGAGCGTCTTCCAAAGATGCAGGACAAAGAATCACAAGCATAACGGAAGTGGTCGATCAGATGATTTACACCGACCTTATCAATAATCTCTTGAAAAATCCAATTTTAAAGTTAAAATAGAGTAAAAAAGTTGATTGGAAATTTGAAAAAAATGTATCCAATACTTGACACAAGGGTGAAATGTAAATATCTTACAGCAATCAAGAACAGCTTGAAAAGATTA # Right flank : TATGAATAGAGAGGTGTTACAAATGAAAACTAACTACGGTTTAATAGTGAGCATTCACTAACTAGACTTTCCTTTGTGCGTTTTTGCACCGATTTTCCAAGGCGCACATACTGGCTTAAGTTTAGAGTCATCACTCTAACAACGAATTGTTGAGAATACACTAAATATATGAATGTATAAATCCCCGAGAAATACGGGAGAAAGGGAAAGTCTAATCTCCCAAAGTGGACAGGGCTTACCAATACATGGACATATTTCAACTTTTTTCGAGAATATGTGGACGAATTCAACGTATAACATTACAATAGAACGGACGGTGTATTAATAAAAGCCTTCGCAAGATTAACTATGTGAAGTCAAGTGATTTTTGAGAATAGAATAACGATATGACACAACAAACAAGCAAGGCTGACCTTAAAAATGTCAGTCGATATCATTTCTGTGAGACGAACGATTTGCTGTGCTTAGTATGAAACGTCATGCATTATCAACTCATTAAC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTAATAGAAGCATATTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //