Array 1 56809-60234 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTLN01000012.1 Bacteroides sp. AF39-16AC AF39-16AC.Scaf12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 56809 47 100.0 30 ............................................... ACTGTATCAGGTTGAACGCCCCTAAAGAAT 56886 47 100.0 30 ............................................... AATCATGCAAGGCAACAACGCTTTGACATC 56963 47 100.0 30 ............................................... ATTATTCTACTTTCATATACCCGTTGGAAA 57040 47 100.0 30 ............................................... GCCAGTGCCAAAGCTGAACGGGATAAAATC 57117 47 100.0 30 ............................................... CCGAGAATTGGAAACTGTTTAAGAGCATTC 57194 47 100.0 30 ............................................... CAACGAAGATTTCATCAGTATAAGCGTACA 57271 47 100.0 30 ............................................... TTACCTGTATGAGTTCACACGGCTTGTCGT 57348 47 100.0 30 ............................................... TTGAGCGTATAAACCCCCCTTTTTGTTTCG 57425 47 100.0 30 ............................................... GGTTCACTTGCATTCATACCGCTTTCTGCC 57502 47 100.0 30 ............................................... AGAAACAAAGTGCTATGGCAACAGATTATA 57579 47 100.0 30 ............................................... GTATCCGACTGCCGTAACAGTGAGCGGTGG 57656 47 100.0 30 ............................................... ATGTTGGGCATTGGGATATTTGTTCCGGTA 57733 47 100.0 30 ............................................... TCTTTCTTTCCTTTATTGTTTACACCGTAC 57810 47 100.0 30 ............................................... GAACCGTGGACAAAAGGTCATTATCAGACA 57887 47 100.0 29 ............................................... TTCAGACAAAATGAGAATATCACTATGCG 57963 47 100.0 30 ............................................... CAAGAGGTTTTAAATCAACAGCATCACCAG 58040 47 100.0 30 ............................................... CTGTATCAGATTTCATGCTTCCGAGAATCA 58117 47 100.0 29 ............................................... CGCCGTTACGCGCATCATGCAGCCGGGGT 58193 47 100.0 30 ............................................... AGATTTGCAGACACGGATTCAGAACCGGTA 58270 47 100.0 30 ............................................... AAACGGAACGAGGAACGCTGCGAAAACCAA 58347 47 100.0 30 ............................................... CTATCATAACGAAAAGAATAGTTACGAAGT 58424 47 100.0 29 ............................................... AAGAAAACAAGGAGCATAAGTAAGAGTAA 58500 47 100.0 30 ............................................... ATGCGTTCTCCTTATTCCACATATTTTCCT 58577 47 100.0 30 ............................................... CAGCGAACGGAGTAATACCAGAGTACACTC 58654 47 100.0 30 ............................................... TTAACATATTTTATGCACACCTGCACAGTA 58731 47 100.0 30 ............................................... AAGGTCTACAGTATTTAATCATATCCTTAA 58808 47 100.0 30 ............................................... TCTTCCTATAAAAAGAAGATGTCGAAAGCG 58885 47 100.0 29 ............................................... AAATTAACAATAGATGCTTTGGGAGAATT 58961 47 100.0 29 ............................................... TTCAGTAAGAATGAGAATATCGCTATACG 59037 47 100.0 30 ............................................... GCACGTGGCATATCTGGCTGAACCGCCCCA 59114 47 100.0 29 ............................................... TGTTGTTAATGGTGCGTTTACCACTACTC 59190 47 100.0 30 ............................................... TCCGTTGTGATTTCCAATGTTGCCGTCGTG 59267 47 100.0 29 ............................................... TCATCTTCTTGCTGCCGTAGCTCATCCAT 59343 47 100.0 30 ............................................... CCTGCTTCAACTCGTCACGCTGATATACAA 59420 47 100.0 30 ............................................... CGGTGAGTACGAATATGCTGACCAATGTGC 59497 47 100.0 30 ............................................... CGACTTTGCGTGCCCCGGTGGTTGCCATAC 59574 47 100.0 30 ............................................... AATGCTTTGTCATCTACTACATCGGTAATC 59651 47 100.0 30 ............................................... AGTGACGGGTACATACGTTGTTAAATCTTA 59728 47 100.0 29 ............................................... CGTATGAGTGGGATATCGGAGTCAATGTC 59804 47 100.0 30 ............................................... CTATGGGGGTGATGTGGACGCACTCCTATC 59881 47 100.0 29 ............................................... CCCGTTACCAACAAGACAATCGGTGGTGA 59957 47 100.0 30 ............................................... CGCTTCAAAGACAGCTACGGCAGCAGTTGA 60034 47 100.0 30 ............................................... TACGAGGTAGAGGCTATTCAGTACGATGGT 60111 47 100.0 30 ............................................... TCATAAGCGATTGATTTGCTGCAAATATAC 60188 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 45 47 100.0 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TGTTCTGTATGGCAGGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCATACTTGTCGGATTCTTTCAGTCGGCTAATGCTGACAGGACCGAAAATCTCGTCGGGCGTAGAGAAGCGGGACATCAGGTATTCAAAGGCACGGGCATCTGTAAAAGCAGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGTCCCAGGAGCAGGATGCTCTCGCCTGCCAGAGCTGCCAGCAGGGAAAGGTTTATTTCAGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGACGAATGCGTTGGGTTATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACAAAATAGTAGGGAAATCAGAGAGAGTCTTATTAAGATTCACTATCTTTGGAAAACAAATACACACAGACACGCACACACAC # Right flank : CTGATTACAAGTAACAATCTAATATTCAAACGATTACACATAGTGTTAGAATATAAAAAAAGAATGCTGCTTCTAAAAAAATCCCGCCATTGCGCGGGATTTTTTTAGAATAATTCTAATTGTTGTCCAGGCGTATTCACATCCACAGTCTTTTTCCCATAAAAAAGTGCTATATTTCCAAATTGCTTGTCCGTAATGCACATAATTCCGACACTTCCATAGTCCGGTAAGAAAGATTTAACTCTTTTTATATGTACCTCCGCATTCTCACAACTCGCACAATGACGAACATATATAGAGAACTGGAACATCGTAAATCCATCCTTTTGCAGATTTTTTCTAAATTCCGCATACGCCTTTTTATCCTTCTTGGTTTCGGTAGGCAAATCAAACAACACTAATACCCACATAATGCGATATTCACTAAACCGGTCCATCACATCTCTGGATAGGATATTTTACGCAACTCACCACTGAAACATTTATACAGAGAAGCCGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //