Array 1 34096-32526 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039292.1 Actinomyces procaprae strain dk561 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 34095 37 100.0 36 ..................................... GCTCGGCGTCGGCTCGGGGCTCGGCGTCGGCTCGGG 34022 37 100.0 38 ..................................... TGGCCCGGCAGTGCCAGTGCCATGGCGGCCGTGTCAAG 33947 37 100.0 34 ..................................... GGAGTCGGACTCATCTACGGCAGCCAGGACGTCC 33876 37 97.3 36 ...G................................. TCGACGCCCTTCCTGTCGGTGGCGGCCGAAATTTCG 33803 37 100.0 36 ..................................... CGCCGAGATCTTGGCCGACACCTCCTCTATTAGCGT 33730 37 100.0 35 ..................................... AGGAGGGTGGTGCCGGCTTGGGCCCTCTTTTTGGT 33658 37 100.0 35 ..................................... ACCCGCGCAACGGCGACAATGTCGTCGGCGTCGTC 33586 37 100.0 34 ..................................... TCAAGGGCGGCCTCGTAGTCCCGGCCGTTCACCT 33515 37 100.0 33 ..................................... CTCTCGGCAACCTCGTTGAGCCAGCAGATGAGA 33445 37 100.0 37 ..................................... GGTCATGCTTACTCCTCGGCTTCGAATGAATTCGTCT 33371 37 100.0 33 ..................................... CTGCGGGTCGTCCCTGGTGTAGTACACGTTCAA 33301 37 100.0 37 ..................................... GCGTCGGCATCATCGCTAGAAGAGATTGAAGGTGAGG 33227 37 100.0 38 ..................................... TCGGCGGAGGACCAGATGAGTCGGTTCAGGCCCGGCAC 33152 37 100.0 37 ..................................... TCGCCAAGCGCTCCTCTTCGCTCAAGGCCTTGTGTCC 33078 37 100.0 38 ..................................... TCATGTCGCACTTGATGCAGGTGGGCGGGCCGTAGACC 33003 37 100.0 35 ..................................... TCGTGTTTGATTAGGGTTGCGCAAACAATCTGCAA 32931 37 100.0 35 ..................................... TCGTGTTTGATTAGGGTTGCGCAAACAATCTGCAA 32859 37 100.0 38 ..................................... TGCACTCGGAGAGGCTGCGGGAGCGGCGACATTCTGAG 32784 37 97.3 39 A.................................... GCCTCGATCTCCTCGACCACCGTGTTCACGTTGGTGAAG 32708 37 100.0 36 ..................................... AGTACGCTTCGTACCAGTTGTTGCACCCTGCTATCC 32635 37 100.0 36 ..................................... GTCATGCGGGCGTAGGCCTGGGCGAGGTAGTCGCGC 32562 37 89.2 0 .............C.......T..........A..G. | ========== ====== ====== ====== ===================================== ======================================= ================== 22 37 99.3 36 GTCAGGAAGCACCTCGCACCTCAAGGTGCATTGAGAC # Left flank : CCCCAAACACGAAGCGCCGGTTTGCGGTCTGCTGCGCCGCTTAGTCGTCTGCTGTGTGCATCCGAGTTGTTCAACAGAGCGTTGACTGACGTTGTTGACGGTGAAGTGGCATGGTAATTGCCCGGCTGGGCGGTGGTGGTTGTGGTCTCTGCCGGGGGTGCCTGTGGTCGGCTGTGGGTGTCCGGAGGTGCGGAGAGCTGCGGTTGCGGGTGTGGCGTGTGGTGTTGTTGGGGCGTGTGTGACTGGTGCGATGCGCGCCCGATGGTCACGATTCGGTCTACGGTACAAAGATTGGTGCGTTTTGACCCCGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGGTCTGAGGGGTGTCGGTGGCGCTTGGCGTGCTTTCAACGAAAAGTGGTACTTTTGGGGTGGTGCTAGCCGGTCCCGTGGGGTGCTTGCGGGGCCGGTGGCGATCTCGCCTCTGGAAGTGGCGGAACGACGCGGTTTCCAGGGGCAGGG # Right flank : TTTGTCAGGCATGGTCTCGGCGTCGAGGTTGTAGGGTGCTTCGCGTTTGAGGGCGTGGATGAAGCCGGGAGTCGGCTCGCCCGCGTGATTAGCGCTGACGTCGTCTACTACGCCGGTTAGGTGTTTGCTGAAGGGTTCTGGGCTCTTGAGCGGAGGTCTAACTGGCGTAGTAGAGGCCTAAGGGGCGTACCCAATGATCGGGCTGCGGCCTCAGTTCCAGTCGCTCCACGTCCGCGACGCCGCCCCACCTCAGATGCTCGCACCGCCAACCTCCATGCCCCCTGCGAAGAAGCGGTTCATCGTCGGGCATACAGGCTCTTCGTGTTCGGGGGCGTGGTGGGCTGGGTGTGGTGGTTCGCCGGGTGGTGGTAGGCACGCGTAGCCCGGCGGCGCGGTACGCGGTGCGATGGACGGGTGTTGGGCTGGGTGTCCGCTGAACCACGGCGGGCCAGGCACGATAGCTCCTGCGTTCGGGTCGATGAGGACGTCGTCCTCCTGCA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTCAAGGTGCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.60,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 2 217621-217076 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039292.1 Actinomyces procaprae strain dk561 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 217620 37 100.0 36 ..................................... GGGCTCATCGCCACCGCACTGGCACTGGTTGCCGTC 217547 37 100.0 36 ..................................... TTGACTTTTCAGACCCCAAATCCGTAGACATCAACG 217474 37 100.0 35 ..................................... TCAGCGCGGTCGAGGCCGTGGAGCACACCACACCC 217402 37 100.0 34 ..................................... CGGCAAAACCGCGTTCTCCTACGCGATCCACCGC 217331 37 97.3 34 ...............G..................... TTAACGAGGTGAGCGCGGCTGAGGTTCCGAAGCA 217260 37 97.3 37 ...............G..................... GCGCACTGGAGGGGCGGTGACGCTCCGTGGGCAATAA 217186 37 97.3 37 ...............G..................... TCGCTCCAGTGAAATTCCCGGGTTCGCCCGGAGATTC 217112 37 97.3 0 ...............G..................... | ========== ====== ====== ====== ===================================== ===================================== ================== 8 37 98.6 36 GTCTTAATGCACCTTAAGGTGCGAGGTGCTTCCTGAC # Left flank : GTCGGTGGTTGGCGTGGCCGGAGCGCTCGCTGGGTGGTGTGGCGCGGGCTGGCACAGTGGGTCCGCACGCTTAAGGAGCGAGCACCCTGGCGGAATCCGCGTGATTCCGCGGATCTGATGAACAACGCTGGTGTCATGACAGTGCTCCAGCGTGCGGCGCGGGCCTCGGCGCACACTGGAGCGATACCAACGGATTCCGCCCCTGACGTAGATTCCGCGTGTTTTCAAGGAAAACCGGGATTTGGGCGAGTGCATGCAAAGGGCCTTTGCGTGCAGACCCGCAACTCCGGCTCGGCCCGTCGGGCAACGCGAGGCACCGGACCGTCACTCGCTGGCCGCCAGCATGCGGGCAACTAATCTCATCGCCGGGCTCCGGCGCCGAGATCGGCCGCCGGAGAACGTCGGCAACGACGATGGAACCCCGAGACCAACCGGCCAGCAAGAGGTGCGAAGCGCTTCCTGACGCTGCTCGCTTCCGCGCCATGCGAGCGTGGTCGGCG # Right flank : CCCTGCCCCTGGAAACCGCGTCATTCCGCCGCTTCCAGAGGCGAGATCGCCACCGACCCCGCAAGCACCCCACGGGACCGACCGGCACCAAGCCAAAACTACCACCTTTCGTTGAAAACAAGCCAAGCGCCACCGACACCCCTCCAGGCCCCTCCAGCCACCAACTTTCAACGAAGTCATGCGGAAAAGTCGGGGTCAAAATGTACCAATCTTTGTACTGTAGATCAAATTGTGACCATCCGGCGAGCACCACACCAGCCCCGCGCACCCCAACAACACCACACGTCACACACGCAACTGCCACTCGCACCACCTAAATCACTCCCAACCGACCGCAGACACCCCGCGAGCCTCCACCTCGGTGCCGACGATTAGCCCTACCGGGAAACTGGCGCTGACACCGTAGACGCTGACGAAGTAAGCTGTTCATCGCTCAGGGCAATAGCCCTGCGAAGCGAACCCGGCAGCCTTCCGGACGGTGGGCGAGCCGGGTTTCGCGT # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATGCACCTTAAGGTGCGAGGTGCTTCCTGAC # Alternate repeat : GTCTTAATGCACCTTGAGGTGCGAGGTGCTTCCTGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 3 3090746-3088307 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039292.1 Actinomyces procaprae strain dk561 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 3090745 37 100.0 37 ..................................... AGGGCATGTTACGAAGTCCACGGGGCGTCACCGCCCC 3090671 37 100.0 37 ..................................... GTAGGTGGTAGCGTAGTAGCCAGCATCGAAGTACTGG 3090597 37 100.0 35 ..................................... TGTAGTCCACCGGTTATGGTAGGCCCCAAACGCCA 3090525 37 100.0 35 ..................................... GACGACGCTAGGGTTGCTCTTATCGGTCAACACGA 3090453 37 100.0 34 ..................................... CGTCGACTTCCTCCGCCTCGGTGCCGGTCTCGGT 3090382 37 100.0 36 ..................................... TTGCGGGCAGCCGCCTTAGCCACCCGGTCTTCTCGG 3090309 37 100.0 35 ..................................... GTGCCGGTCGCGGCGGTGTTAAAGGGCGATAGCCC 3090237 37 100.0 36 ..................................... TCCTCCCACTCACCAGTAGCCCGCTCGCGGTATGCG 3090164 37 100.0 37 ..................................... TATTAATTTTCTGTTACGCATCGTCGCCCCCTTGGGG 3090090 37 100.0 36 ..................................... GGATACAATGAAGACGAAGACGCACGCGGTTAGCAC 3090017 37 97.3 36 .............................G....... GCGTTGGTGACGCCGTCGAGCTGCCCGCGGTAAATC 3089944 37 100.0 36 ..................................... TCCCAGCACGGCCGGGAGTACGACAATCGCGAGTGC 3089871 37 100.0 35 ..................................... GGCGCGGCGGGCCTTGCGCCGAGAGGTCACCTCCT 3089799 37 100.0 36 ..................................... CCCTGGGGGGTAACGACGAACTCGCTCGGCTCGCTC 3089726 37 100.0 36 ..................................... GACTGCGGCGCAGGGGCCTAGCCTGCAATGTCTCGT 3089653 37 100.0 37 ..................................... CCTGCAACTAGACACTCTACGATAGGAAGTTACGGAA 3089579 37 100.0 35 ..................................... GACGAGCACTGCCCCGGTCACCCAGAGACCCTCGC 3089507 37 100.0 35 ..................................... GCTGGGCCTGGCTCATTTCACTCACCTCCCCTTGT 3089435 37 100.0 34 ..................................... CCGCCAGCAGGGCTAGCGCTGGAAGAAGGGTGTT 3089364 37 100.0 36 ..................................... CCAGGAACGCTACAGCAATCATGCTGCTAAGGTACG 3089291 37 100.0 37 ..................................... ACCTGGCCGGCATTGTTTGCCTCCTCCTTGGGCGGGG 3089217 37 100.0 36 ..................................... AGCCTGATGGCTTTCCCGGCATCTCTGCCTGTGTCG 3089144 37 100.0 34 ..................................... TAGCGAATTTCGTCCGACACGCAGTGCAGCTCTC 3089073 37 100.0 37 ..................................... CGACGTAGCTGGGCATGATGAACCAGTAGTCGTCACT 3088999 37 100.0 35 ..................................... GTCGGCGGGAGTGCCGCGGAACTCCACGCGCTCCT 3088927 37 100.0 37 ..................................... TCGTCGGCAGCGCCGATGAAGCGCGGGGCCTCCGGGT 3088853 37 100.0 33 ..................................... GCGCAATACGCTGCGCAGAAGTCGGCGCAGTAG 3088783 37 97.3 37 .......G............................. ATCAAGGATACGAGGGCCTTGAGGACGTTGATCCGGG 3088709 37 100.0 35 ..................................... GCTGTACGGGACCCGCCTGACCATGCCCGCGCCAC 3088637 37 100.0 38 ..................................... ATCCCTTCACTAAAGGGCGTCGCCCTATTCCTCAAAAA 3088562 37 100.0 37 ..................................... TCCTCCGATTGACCTCTCGGGTCTCAGCGGCGTATGC 3088488 37 100.0 35 ..................................... CCGCGCTCCAGCAGGTATGCGAGGAGCGTGACCAG 3088416 37 100.0 36 ..................................... AGCCCCAGAAAGGGTGTTGCTAGGACGTAGGTGAGG 3088343 37 91.9 0 ................................TG.G. | ========== ====== ====== ====== ===================================== ====================================== ================== 34 37 99.6 36 GTCAGGAAGCACCTCGCACCTTCAGGTGCATTAAGAC # Left flank : CAGGAACGAGGAGAAAGACTGCGGCAAGAGTCAAGACAAGTTCGGCGCGCTGGGGCTCAGCGCGTCCTGGTTCTCCAGGTTCGCGCAGTTGCTGCGGGAGATTGAGGGATGATCGTAGGCGTGGGACGTCCGTGCGGTGTTGCTGGGAGCAGGCGCGGGCGAGCGGTTCCTCCGGGGCGTGGCGTCGACCCCGAAGGGCGTGTGTCGCGTGTGACAGCTGGTGTCTGTGAGGCGTGCGTATCTGGTGTGGCGTGCGCCGGGAGGTCACAATTCGGTCTACGGTACAAAGATTGGTACGTTTGGACCCCGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGTCTGGAGGGGCGTCGGTGGCGCTTGGCTTGTTTCCAACGAAAGGTGGTAGTTTTGGGGTGGTGTCAGTCGGTCCCGTGGGGTGCTTGTGGGGTCGGTGGCGATCTCGCCTCTGGAAGTGGCGGAACGGCGCGGTTTCCAGGGGTAGGGG # Right flank : GCGGCGGACGGCCGCCTGTGGTGTGTTTCGGGCTATCGACGTTTGGGGGCGTGCTGGTTTTGGCCAGGCTGTGCTGCGGTGGTCGTGTTCGGGCGGGTGCGGGCGTGTTCGGGTCGATGGGGTCGTACTCGGGCAGTGCCAAGCTGCCGAGAACGTCATCGTGATCCCCGGTCCCTCCACGTTCGTGAGGGACTGGGGCGCACGAGGACGTTTTCGCCGGGCGCTGGTCGTCCTCGGGCGTAAGCGGTCGTAGTCGGATGTGCGAGGCCTTAGTGGTAGTAGGCCTGGCACGCCCGGGTGTGTTTGCCGGTCGTCGGCGTCGAATGGACTGTCCGGGAGTCGCTCTCAGGCAGTCCGAACACGGGAACCGCAGGAACACCGCCCAAACAGGGAAGATCGGTGATGTCCGGTGCGTCACCACGGCCGTTCGGACGGTGCTGCCGCCGGAGGGAATGCGGCTCTTTGCGTTTGAGGGTGTGGTGGTGTGCAGGTGAGGGCCT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTTCAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 4 3116179-3114473 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039292.1 Actinomyces procaprae strain dk561 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 3116178 37 100.0 36 ..................................... GACGTTGGCTTCCATTTGGACCTCCTGTCCAAATTG 3116105 37 100.0 36 ..................................... CCGTTGGTGAAGTGTGCGTTTATCTACAAAGCGCCC 3116032 37 100.0 35 ..................................... GCTGTATAGTCCAGCCCAGCCGCAACAATAGACAT 3115960 37 100.0 36 ..................................... TTCTCCCGAAGAGTGTTCCCGGCGTGCCGACGGAAG 3115887 37 100.0 37 ..................................... TTGGCGGCGATGACGCGGTTGACAGCTTCGTTGATAC 3115813 37 100.0 37 ..................................... GAACGTGCCGGCCGCGCCGCGCGGAGCGCAGCGCTAG 3115739 37 100.0 35 ..................................... CTCCGGGCAAGCGTCTGCCCAGAGCCCAACATATA 3115667 37 100.0 37 ..................................... GCTCTGCTTCACGGACGTGGTGATGGTGTTCTGGTAG 3115593 37 100.0 35 ..................................... ATGACCGACATCAATTTTTTGTTACGCATCGTCGC 3115521 37 100.0 36 ..................................... TTGGTGACGCGACGCTGGACGCGCTCGGCGGAGACG 3115448 37 100.0 34 ..................................... GAGAAGGAAAGTTTGTTGAGGGCGTGATTGACGC 3115377 37 100.0 37 ..................................... GACCTCGTTCGCAGCGGGAGCCTGGGACTGGGGCTGC 3115303 37 100.0 31 ..................................... CGATTCGCTCTAGATCCTCCTTACTCAGCTC 3115235 37 100.0 35 ..................................... TTCCGCCTCGGCGGCGGTGTCGGCCTGTGCGGCGA 3115163 37 100.0 34 ..................................... TTTTGCAGTGTCGGCCGTAGCCGGCCACGGGCGA 3115092 37 100.0 36 ..................................... CAGTCATTGCGGTCGTTACTCATGCTTCCTCCTTGA 3115019 37 100.0 36 ..................................... ATCTCTTCCCGGTCCTCTGCTGCACAACGCAGACGT 3114946 37 100.0 34 ..................................... AAGGGCTGTGAAGCACAAAATTACGTTCGCGCAG 3114875 37 100.0 36 ..................................... TGTCACGCACGCTCCTTGACCATCGCCGCGACATAG 3114802 37 100.0 37 ..................................... ACACGCTCCTCCGACCAGACCTCCGTCTCAAACCTGA 3114728 37 100.0 38 ..................................... TGATTGCTATCATTCTGGACCTCCTGTCCAAATTGTTA 3114653 37 100.0 34 ..................................... GGACGTCCGTTGAGCTGGAAGATCAGGGCGACCT 3114582 37 100.0 36 ..................................... CTCCTCGCTCGGCTTGAAGATCGTGCCCCACATGGG 3114509 37 97.3 0 ..........G.......................... | ========== ====== ====== ====== ===================================== ====================================== ================== 24 37 99.9 36 GTCAGGAAGCACCTCGCACCTCAAGGTGCATTAAGAC # Left flank : CACGCCTCCTGCTGGTTTGTACGCGTGTGCGTCACGACGTTGTGTGCGGCGGTGGTGGGATCGGGACGCCGAGTACATCCTGTCACCGATCAAGCGGGTACGGGAGCGAATTAGCTGTACTAGCTGGTGGAGTCTTGCGATGAGGAGTGCCGTTGTACAGGGGGCGTTGGCAAGGGGAGAGGAGACGGAGCGACAGTGCCGGGTTGCGGGTGTGGCTGGTGGCGTTGGTGTGGCCTGTGTGGATGGTGTGACACCTGCTGGTAGGTCACAGTTCGGTCTACGATACAAAGATTGGTACGTTTTGACCCCGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGCCTGGAGGGGTGTCGGTGGCGCTTGGCGTGTTTTCAACGAAAGGTGGTACTTTTGGGGTGGTGCCGGTCGGTCCCGTGGGGTGCTTGCGGGGTCGGTGGCGATCTCGCCTCTGGAAGTGGCGGAATGACGCGGTTTCCAGGGGTAGGG # Right flank : CCGCAGGCGTATCGAATCGCTACGCCGTTGATAAGGGGCTCTTCCGGATTTAGGGGTGTGGGGTAGGCGCGGGCGCCTCGGTCTGGTGTGGTAGTGACTCGGGCCTGGCTGGTGGGCCTGCCCGGTGTCAGTAGTCGAACCCGCGGGCTGGTCGCGCGTGTCGAGCCCAGGCGTATACGCGCGGACAGCTGGCGTTCGGGGTGTGAGTGGTGGTGAATGTCCAGATTCGGGACAAACGGTGCGGGCAGCGTCCCAGGCCACGACCAAAACGTTGGAATCATGCGGGTTCCAGAACGACTCACGCCCACGTGGGCGGCGTTTGTCCCGAATCTGGACACTTTTCCGGGATGTGCGGCAGCAGCGAGCGCCGCCGCAGGCGTACCCGCAGGTGAGTAGAGCAGCACGCGAGCCACACGTGCGCCGGACAACGCACCCTCAAGCTGGAAGAGCCCGTTACACCGGGGCCTGCCCTGCGGGCCTGCGGTCAAAGGTCCAGCACC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTCAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.60,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //