Array 1 5343-5493 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIPO01000001.1 Streptomyces albus strain NRRL B-1685 B1685_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5343 29 100.0 32 ............................. CAGCGCATCAACCGGGTGAGGCCCTGCTACAT 5404 29 100.0 32 ............................. CACCCGCCCCTCCCCGCCCCGGTCACCGGTGA 5465 29 93.1 0 .........................TG.. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 GTGGTCCCCGCACGCGCGGGGTTGGCCCC # Left flank : GGTACCGCTCCGCGCAGTGCCGGACATGATCAGCCGAGGCGGAGTGCGCTCGGCCAACGCCGTGGCCGCACTGCTGATGCTGCACCGTCTCCGGCTGAGCTGACCGGCCGGAGAAGTCGAAGATGCAGGACAGTCTTGCCGGGCACGCGGTGGTGGCATGGCTGCACCGGTCGTCGTCCATCCGCCCGACGTGCGGAGCGTCGGCCGTGCCCTGAGTGCCGGCCGCCCCCTCCTGGGCCGGCAGGCTTCGGCGGGCCGAGGGGGCGGGACGCGGGGCGCCTGGAGCGGGGTTTCCACAGGCAGGCCGGACAGTCATACCGGAAGCTCACCCCTGTGAATAACAGAAGCTCGCAGGGCCAGCCCCTGACGAGCCCGAAGCGGCCACGTGGCACCCTTCGGCGGGATTTCGACCGTACGAACGAGAAACACCCGGAACGTCCGAGTCGTGGGAAGTAGTTAGAATCGGCACTCGGCTGGCGAAACGCTGCTGGTCGGCGCCT # Right flank : CGGGTGCGTGATGGTGGACCGGAAGCAGCAGGCCGCGCCCTGCTCCGGCTTGGCGATCGGGCGGACGGCCATGCAGACCTTCACGGGTCAGCGGTGTGGTTGACCCGCCCCCGGACCTTCGCTGTCACACCGCGCGGCCGGGGCGGGAGCTGTCAGGCCGCAGCCTCATGTGTGGTGGGCCTGGGCCCGTTAGGTGTTGGCCCAGCAGTCGCCGCGGAGTGCGGCGTGGGCCAGGAGGACGGCGGCACGCATCTGCACCACCGGGTCCGCGGTCTCGTCCGCCTCGACGGCGAACGGGCCCGCGGCTTCGTCGTGGTCGCGGGCGGCGCGGCGCAGCCGGGTGGCGAGTGCGAAGGCCGGCCCGGACACCCGGGGAAGAACACGGTTCCGTGCGTCCTGGGCGAGGCAGGCGAGGGCGTCGGCGCGGTCCTGCGCGCTGCTGGCCCGCCAGCTGCTCGTCAGGAACGGGGAACTGGCGGCGTCGTGGCGTCCGACGACGT # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACGCGCGGGGTTGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGCCCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1749-1477 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIPO01000002.1 Streptomyces albus strain NRRL B-1685 B1685_contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1748 28 100.0 33 ............................ CCGGTGCCGCTGGAGCTGCTGTTGCCGCTGCCG 1687 28 100.0 33 ............................ CCGGATTCGCCGCTTCCCCAACGGCATGAGCTT 1626 28 100.0 33 ............................ CGTTGATCGTCGGACAGTCCGGACAGTTTTGGG 1565 28 100.0 33 ............................ CGCCTGACGCCTGGTCAGAACCGCAACTGTCCA 1504 28 96.4 0 .........................C.. | ========== ====== ====== ====== ============================ ================================= ================== 5 28 99.3 33 GTGCTCCCCGCACGCGCGGGGTTGGTCC # Left flank : TTCGGCGCAGGCGGGGCGGATCGGCGTCCGGGGCTGCCTTGTCCAACCCGCAGGCGCCTCCGCGACGTGACGTCCGACGCGCATACCCATGGGTTGCCGCGCCAGGCGAAACGGAACGCGTCTCGTTCGCTCCTACCGGCCGAATGCGGCCAGCTCCACGAGCAGCTGCGCCATAGCCACCAGCAGCGCCCACCGGCACCAGTCCACACGGCGTCGGTCCGCGCCCAGCTACCCACCTCCATGATCCGTTCCCGGGACCGTAGAACGGGGCGCGAGGTACCCGGAGCGGGGTACCCACAGGCAGGCCGGATCGTCATACCGGAGGCTCACCCTTTGGATGAAGGGCTCGTCGGACTGGAGGCTGACCAGCCCTCGCAGTGGCCCAGCTGACACCCTTCGGCAGGGTTTCGACTCCTAATGGGAGAACGCCCGGAAGGTCCGAGTCGTGGGAAGTGGTTAAAATCAGCCCTCGACTGGCGAAACGCTGCTGGTCAGCCTCT # Right flank : CAGGTTCCGGACGTCCGCGTCGGTGATGGTGAAGTGCCGCCTGTCCCCGCATAGTGGCCCCGCCGGCACCACTCGGCGGGGCCATCCACATGGTCGGTGCGCTCCAGCACCACGTCCAAGCGCCCGCCCAGCCGCGCGAAACCTGCCTCGGTCACGCCGCGCAGGTGCTCCAGCTCGACGGCGACCGTCGCCTCTTCCGGTACCCGCATTCCTTCTGCTCGCAGAGCCGAAAGCAACTGCGTCCTGAACGGCACGTGCACGGGGGCGCTCGTCGCCGCTGACGACGGAGGTGACTGGCGCCGCTCGCTGGTGGCCGCGTGCACCGAGCACGGTTCGGGGATCGGCACCCCGGCCCTGTGGGAGGTGGCCGCGTCAGCGACCTGCGGCCCGCCGGCTTGCACTTTCCCGAAGGAACGCAGGGGAACGTGGCGGAGGGGCGCGTGCAGGGGCCGTCTTTCGGCGAGCTGTGGGACGGAGTGCGGGAGGCGGTCCTGGTGCCG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACGCGCGGGGTTGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACACGCGGGGTTGGTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 11980-12313 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIPO01000440.1 Streptomyces albus strain NRRL B-1685 B1685_contig_440, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11980 29 96.6 32 ..........C.................. CTCGCCGTCGATGACCTGACATGGACGTGGGC 12041 29 89.7 32 ..........C..C...........C... ACGCGCTGTGTGCCCGTGCTCCTGGCGGTGGT 12102 29 100.0 32 ............................. TGCGCCCCTTCCGCCCGGTGTGCAACCACCGG 12163 29 100.0 32 ............................. AGCGCGGTGCGGGGATCGTCGAAGGCGACGGG 12224 29 100.0 32 ............................. GATCCGCGTCTCCGGCGACTCCGGCCACACCT 12285 29 93.1 0 ..........C..C............... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.6 32 GTGCTCCCCGTACGTGCGGGGATGGTCCC # Left flank : ACGCCGGCGTCGCCTTCCCAACGTCGTGCACCCCGGCGAGCCATACGGCCAAGGCACGGGCGTCGGCGAACCCACCGAGAAGGGCCTGGGCAACGAGGCGCTTCACCTGCTCGGGCAACCACCGGTCCCAGAGCAGCCCGGCCGTGGCAGCGCTGTCGGACATGTGCCGCCAGAGGGGTAGGTAACCGTCATCCGCATAGGACGACTTGGCCCACGCCGCGCGCGCCCCCGGGGACAGCCGCTTACCGAGCCGCCCCCGTACTTTCTCCCCCACCGCCTACCTCCGCTGTTCCCGGCCCCGTCACACGCATGACGCCGGGCTCGAACGCCACCCCAACCGGCAGTATGCGCACGCGCGGAGCAGTCGTGGGGAGAGTTGACAATATGGACCGGAACTACTCAGCCCCGCGTCCCTTTCGAACTGTTGGTGAGGTATGCACCATTCAATGAAAGTGAATCCCACGGCCACCGGCAACGGATAAACCCGCAGGTCACCGAGT # Right flank : CCTCCACGGGCCGGGCCAGCAGGGCAAGTCCAGACCTGCGGAAACGCTCCGGAGGAACGTTTCCGCAGGCCAGAACGATTCTGCTGGGTGGGGCGGGTGGGACTCGAACCCACGGCCGACGGATTATGAGTCCGCTGCTCTAACCGGCTGAGCTACCGCCCCGTAACGGCGCGCCGCGCACGAATGTGCGCGCCGTCTGCCGCAGCATAACCGTTCATAGGATCTGCCGCCCGCGGCGGGGGAGATCTACGCAGGTGAGGACCCCGGACAAGGGGTGAACGGTTCCCGCTCCCGCCGACTTCCGCGAAGATCGCCGGAAAAGGGCGGAAAAGCACCCGTCGGCTCCGCCCTCCCCGGCCGCCCCCTCGCCGCGCGGACAGCGCCGGCCGCATCACCGCGCACCGGCCCCGGCATACCACCGCGCACCGCCCCGGGCGTACGGCACCGCCCCAGGCATACGAAAAGGGCCCCGAAGGGGCCCTTTCCTTCTTGCTCCCGCG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGTACGTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //