Array 1 541580-541867 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDF010000001.1 Clostridium botulinum strain KM87-1-86F 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 541580 28 100.0 38 ............................ TCTTGAGTAAAAAATAAAACCTCATGTCCTTCTAGGGC 541646 28 100.0 37 ............................ GATACCTGTTGTGTAAGTTTAGCTATCTCTGGATTGT 541711 28 92.9 37 ......A........T............ ATATATGCACTACGGTGTTTTACATTATTCGGACTAT 541776 28 89.3 36 .............AG............C AAGGTAGATATGGCCATATCTACTTGCGGAGCCTAT 541840 28 92.9 0 ......A......A.............. | ========== ====== ====== ====== ============================ ====================================== ================== 5 28 95.0 37 TGAACATTAACATGAGATGTATTTAAAT # Left flank : TGTTTCATAAAAAAATAGATTATGAAAATATTAAAGAAGAACAATTAGATGAAATTTTAGAGGGGATAAAAAAAGAGTTTTATGATCTAATAATATCAGTAAAAGAAGAAAATAAAAACATAATATTAGTTACTAATGAAGTAGGTTATAGCATTGTTCCAGCCTATAAATTAGGCAGGATATTTAGAGACTTTCAAGGTATTATAAATAAATTTATAGCCTCTTTAAGTGATGAGGTTTATTTAGTAACCTGCGGAATACCATTAAAAATAAAATAAAATTAATTTTAGTAACTAATTAATCTAATTATAAGTAAAAGAATTTTCAAACCGCATTTAATTTTAAAATATATTCTAGGCATTGAAATATAAGCCTTAAGATAAGCTTTATCTCTATCTTTATAAAAAATGGCAAACGGTTGGAAAAAATTCTTTAAAATCTTGTAAAATCAAGGCTTCTATGATATTCTTAGAATTAAGAAATGGCTATTTTACTATGGT # Right flank : TCAGCATGTAAGATAAGGTGATTCAAAATAAATTAAATCTATTTTGAATCACCTTATTTTGTGTAATAAATACTAGCTATTTTAGATGATATTTTAAAAAAGCATATAATTATTATTTTATATTGTCACAATAAACATTAATAGCTTCCTTTAAAAATTTAGAAAGACCAGTTTTATATTTATCTATATTAGTAGTAAATCTTTCATCATTAACATAAAGTTCTCCAAGACCCCTAAATATTTCAGGGGTACAATCATAAAAGTTTTTTGAAATATGCTCCCTAAATTGGTGGACAGATTCTTGAACTTCCTTATCATCTGGATTTTTGTCCATAAGATTTGCTAGTTTTTTAAAAATTTCATCCCAACCTTTCATTATATTACTCCAGTCTTCCTTTGTATATTTGGATGTTTTTTTATTACTTTCCTTATAGGCAGAGGTATTACCGTATTTTTCTTTTATCTCTTCTGAATATTTTCTTTGATGCTCCTCTATTTCA # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 1848049-1847758 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDF010000001.1 Clostridium botulinum strain KM87-1-86F 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1848048 29 89.7 37 ......A.......AG............. GTCCTTTCTTTTGTTTTATCTATAAATAAAGTAAGAG 1847982 29 100.0 37 ............................. TTTATTGCTTTACTAATTGTCCGTAGATCTTTTTTAG 1847916 29 96.6 36 ......C...................... TTGTATTCATTTATTGTATTCTTAAATACATTCTCG 1847851 29 89.7 36 ......A.......AG............. CCATAAATATCTAATACAGAAAACTTAGAAGATACA 1847786 29 82.8 0 ....G.AA...................GC | ========== ====== ====== ====== ============================= ===================================== ================== 5 29 91.8 37 TTGAACTTTAACATGAGATGTATTTAAAT # Left flank : TGGCTATTTTACTATGGTTGAACAGTAACATAAGATGTATTTAAATAATTCGGATTCAGCTTCTATGTTTCCCATAGCCGCGTTGAACAGTAACATAAGATGTATTTAAATTCTAATGTAAAATATTCTATTGTCCTATCTTTATCTAGTTGAACAGTAACATAAGATGTATTTAAATCTTAATTCGTGAAGTACTTCTAACATCTGATTATGTGTTGAACATTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTGCTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAGCCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGATA # Right flank : AGAGAACTTTAATATGTAATTTGGTGTGAGTCGCTTACTCTTTGGAAGCAACGAGAAGGAGTTTTATAAATTGAATTTTCCAGGCGTAATAAATTTTAAAACTTATTCTAGCTATTGAAATATAAGGCTTAGAATAGGTTCTTGTTATGTCTTTATAAAAAATGGGAATTAGTTGGAAAATTTTCTATAAAACCTTGTAAAATCAGTGGGTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGATTGAACATTAACATAGGATGTATTTAAATGCGTGATTAGTTCCTTTTACTCCTTCGTAAATCAATATTCAACATTAACATAGGATGTATTTAAGCAGAGAACCCAAATCTACGATTTGGTGTGAATCGCTTACTCTTTAGAGAATGGCATAGGGATTTTTATAAAACTAAACTATGCATTATGATAACTTCTATATAAATTATTAGATAAAGGGGGATTTTATGAAAAATAAAGTTACTAATAATTT # Questionable array : NO Score: 3.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACTTTAACATGAGATGTATTTAAAT # Alternate repeat : TTGAACATTAACATAGGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 3 1848533-1848305 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDF010000001.1 Clostridium botulinum strain KM87-1-86F 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1848532 30 100.0 35 .............................. AATTCGGATTCAGCTTCTATGTTTCCCATAGCCGC 1848467 30 100.0 37 .............................. TCTAATGTAAAATATTCTATTGTCCTATCTTTATCTA 1848400 30 100.0 36 .............................. CTTAATTCGTGAAGTACTTCTAACATCTGATTATGT 1848334 30 90.0 0 ........T...................GC | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 97.5 36 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : CAAAAGCCTATATCCATGTATTTACTTTGTTTTTTGTAGTAAACATTTATGATATGATTGTTCTAGATATAGGTCTTTTTTGTCACAGTAAAAAAACTAGAATACCTGGTACAGAAGATATGGATAAAGAATATAGAAATCCATGGCATCATATAAAAGGAGCTGGTATTGGAACTATAATAGGTGCTGTAGTAGCATTATTATCTAGAGGAATGGTTCATTTTATATCAATAATATAGTATTTAAGCAGGGAACCCAAATCTACGATTTGGTGTGAGTCGCTTACTACTTTGAGAATTGGAGAAGTAGTTTCATAAATTAAATTTTCCAACCACAATAAATTTAGAAACCTATTCTAGCCATTGGTATATAAGGCTTAGAATAAGTTTTTGTCATATGTTTTTGAAAAAATAAAATCACTTGGAAAATTTTCTATAAAACCTTGTAAAATCGATACTTATATGTTATTCTTAAAACTAAGGAATGGCTATTTTACTATG # Right flank : AGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTGCTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAGCCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGATATTGAACATTAACATAGGATGTATTTAAATGTCCTTTCTTTTGTTTTATCTATAAATAAAGTAAGAGTTGAACTTTAACATGAGATGTATTTAAATTTTATTGCTTTACTAATTGTCCGTAGATCTTTTTTAGTTGAACCTTAACATGAGATGTATTTAAATTTGTATTCATTTATTGTATTCTTAAATACATTCTCGTTGAACATTAACATAGGATGTATTTAAATCCATAAATATCTAATACA # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 4 1855402-1855114 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDF010000001.1 Clostridium botulinum strain KM87-1-86F 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 1855401 28 96.4 36 ...............G............ ATAAGCTAAGTACATATTCACATGCATATTTATTAT 1855337 28 100.0 37 ............................ ATTAGTCTAACGGTGTGGCTAGTATATCTTCATGTCC 1855272 28 100.0 38 ............................ ATTAATATCACCTATTTACTTTTTTCATCTTCTTTAAC 1855206 28 100.0 37 ............................ ATTCAATTAAATCTATAACTATTTCTATTTCATCTAT 1855141 28 96.4 0 ..........................G. | ========== ====== ====== ====== ============================ ====================================== ================== 5 28 98.6 37 GTTGAACAATAACATAAGATGTATTTAA # Left flank : AAATCACTTGGAAAAATCTCTATAGAATATTGTAAAATTAATGGTTATATGATATTCTTAAAAATAAGAAATGGTCATTTTACTATGGTTGAGCAGTAACATGAGATGTATTTAAATGTATCTAATATCTTGCAATGTCTATTGGCTCCTCTCTTGAACATTAACATGGGATGTATTTAAATATTCTTGCCTTTTCTATTTGTAGCTCTATACTATTTGTTGAACATTAACATGAGATGTATTTAAGCAGGGAACCCAAATTTACAATTTGGTGTGAGTCACTTACTCTTTAGAGGTAACGAAAAGGAGTTTCATAAATTTAATTTTCCCAGGTGTAACAAATTCAGAGCCTATTCTAGCCATTGATATATAAGGCTTTGGATAGGATTTTATTTTGTATTTACAAAAAAGCAAAATCACTTGGGAAACTTTCTACAAAACCTTGTAAAATCAATGCTTATATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : GCATAGAACCCCAATCTGTGATTTAGGATGAATCTCTTACTCATTGAGATATGGAGAATCAGTTTCATAAAACAAGTGAATCTGAGTAGATTTTTATTGACTAAAATATTTTTAAAATTTAGTTTTAATTTTGGCTATGCTTTAGAGTGGTATTGGAATTTTAAACCCCATTAAAAGAAGTTAAATATTTTCTTTTAATGGAGTCTATATAAATTGTTAGATACTAGTTATTTAAAAATTTTTTCAATGAATCATTATCTTTAGATAAGTCTTTTAAGTTTCCATATTTTTGTTCTAAATTTTTTCTATCATATTTATAGGATTCTTCTCCTATATTGTCTACATTAAATTTAATAATTTCAGCGTTTGGTATAAGAGATAATAATACTACCGCATTCTTTTCTAAAAGCTTGTCAGCTTTTTTGTCACTCCAAAATTTATTATAATTTTCTTCACCTAAATTTTCATTCGCTTTATAGTTAACAGTTATTTCATATGGC # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATAAGATGTATTTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 5 1856388-1856095 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDF010000001.1 Clostridium botulinum strain KM87-1-86F 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1856387 30 100.0 36 .............................. CAAACTGCTTCTAAAGTATCTCCAATTTCTTCACCT 1856321 30 96.7 35 ......T....................... ATTATGATGGTGATATAGTTTATGATAGCGATAAG 1856256 30 100.0 36 .............................. TTGTATATTCTTTTCCATCTATTGTAACTGGTGTTC 1856190 30 96.7 36 .......C...................... TTATATAAATCATCAAAAGCGTTATTTTTTTCTAAA 1856124 30 93.3 0 ............................GC | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 97.3 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : TGAAATCTTGTAAAATCAATGGGTATATGATATTTTTAGAAATAAGGAATGGCTATTTTACTATGATTGAACAATAACATAAGATGTATTTAAATAAAAGATAAGGAGGGTAAATCAAGAAGGATATTTTTATTGAACAATAACATAAGATGTATTTAAAATTCATTTGACGACCATATGTAGAAATAAGGAAGGATGTTGAACAATAACATATGAGGTATTTAAGCAGTAAACCCAAATCTTTGATTTCGCGTGAGTCGCTTACTCCTTCGAGAATAGGAGAAGGAGTTTCGTTAATGAGCATAGTATATATCTAATTAAATTTTTCCAAGTGAATTTAAAATTAAAATCTATTATAGCTATTGATATGTAAGGCTTAGAATAGGTTTTTATTGTGAGTTTTTAAAAAAGCAAAATCAGTTGGAAAATTTTCTATAAAACTTTGTAAAATCAACACTTATATGCTATTCTTAAAATTAAGGAATGGCTATTTTACTATG # Right flank : AGGGAAGCAAAATCTCTAATTTATCGTGAGTCGTTTACTCCTTCGAAAAATAAGAGAAGTAGTTTCATTAATGAGCAGAGATATATTTTATATTTAACTAATTTTTTTCACGTGAATTCAATTTTAAAATCTATTCTAGCTATTGAAATGTAAGTCTTAGAATAGGTTTTTATTATGTATTTATGAAAAAACAAAATCACTTGGAAAAATCTCTATAGAATATTGTAAAATTAATGGTTATATGATATTCTTAAAAATAAGAAATGGTCATTTTACTATGGTTGAGCAGTAACATGAGATGTATTTAAATGTATCTAATATCTTGCAATGTCTATTGGCTCCTCTCTTGAACATTAACATGGGATGTATTTAAATATTCTTGCCTTTTCTATTTGTAGCTCTATACTATTTGTTGAACATTAACATGAGATGTATTTAAGCAGGGAACCCAAATTTACAATTTGGTGTGAGTCACTTACTCTTTAGAGGTAACGAAAAGG # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 6 1869939-1869644 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBDF010000001.1 Clostridium botulinum strain KM87-1-86F 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1869938 30 93.3 35 ...A.............T............ TGGGAAAATATACTTGCAACTAATCAAGAAATACC 1869873 30 100.0 36 .............................. CAAATAAGGAAAAAGAATATCTTATACACCCCCGGG 1869807 30 100.0 37 .............................. CCAAATTCTCTGCCAGATCCTTCAAATTCACTAAGTC 1869740 30 90.0 36 ............T..A....A......... TTGCACGTCCCATAAGGGGACTGATATCAAACTGTT 1869674 29 76.7 0 ........A......A.T..A.-.AA.... | GT [1869668] ========== ====== ====== ====== ============================== ===================================== ================== 5 30 92.0 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAGCGGATTTGCATTTAAAGAGGTAAAAGGTGGAGAAGAAAAAAGATTTGATATAGTAATAACCTATAATAAAAAAATGTATATTTTAGAACTTAAAATATGGAGAGGTGAAGAGTATCATAAAAAAGGCTTAATACAGCTAGCAGAATATTTAGAGCAATATAAATTAGATAAAGGGTACCTTTTAATATTTGATCTAAGAAAATCCACAAATTTAATAGTAGAAGTAGAAGAAAACTATATAGGTATAGAAAATAATAGTAAAAAAATAATACAGGTTTATTGTTAAAAAGTATATAGCAGTTAAAAATTATTTCTAAATATTTTTCCAAGTGAATTAAAAGTCTAAACCTATTCTAGCCATTGAAATATAAGGCCTAGGATAGGTTTTTATTATGAAATTTTAAAAAACAAAATCACTTGGAAAAATTTCTATAAAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : TAATATGATATATAATAAGAATCATTAAAAGTCTTAGAAGAATCTAAGGCTTTTATTTTATGCAAAGCTTTAGAATGAAATATGATAGGTAATTAACTTATCATTAATAAAGATAATAATATTTTTAAAATAAAAGTAGAATAATTAGTTATATTAACTAAAGGGCATATGGTATAATATAGATAAATTTGTATAAAGAGGTGTATAAATGGAATTTTGGGAACTGATTGTAACAGCGATGTTGAAAAAAGACATATATTTTGAAGATTGTGGGTATATAATAGGGAAAAATATAAATAAAAGTATGCTTTGGGATAAGGACTTAAAGGAAGTACATCCAAAGAAACAGTATAAAAATTATGTGTTTAATAGTTTTTATCCTATAGAAAGAGATAAATTTTATAAAAAAGATAGGTTGTATATTTTTAATATTAGGGGATTAAGTAAAGAATTTATAGATAAAATAGAAACTTGCTTATGTAATTTAGAAAGTAATGATT # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //