Array 1 23763-24125 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPKR01000012.1 Listeria sp. SHR_NRA_18 NODE_12_length_90428_cov_27.5612, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 23763 30 96.7 37 .G............................ CTAAAAAAGAAGACCGGTAGGCCTCCTGTGCGTTTTG 23830 30 100.0 36 .............................. CTTGATGGGTTTCCATCCACTCAAACCGTAGATAAC 23896 30 100.0 37 .............................. AAGTAAATCGCGCTTAGCTACTGTCATGGCTGTGTAA 23963 30 96.7 37 .......................T...... GACGTAGCGCTTTCTGGTGCTGTTTCTGTTGTCGCTG 24030 30 96.7 36 .......................T...... TCGAAAAGTAGTTGTTTTGCTTCATCTTCTTCAACA 24096 30 90.0 0 ..........................TTT. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 96.7 37 GTTTTTATCTAAGTAATGTGAAACGTAAAT # Left flank : CTCCACGAAGTTCCAGGCTCCGAGAAAATATGGGACGCCGACATGGTGCTCATCGCGATTGGATTCGCCGGAGCGACGCCATCCATTTTTGAAGATTTCAAGGTAGGTAAAACAAAACGCCACACGATTGAAGCCGCGAAAGGTTTTTACCGAACTGACGTAGAAGGAATCTTCGCATGCGGCGACGCAAGATACGGTCAAAGTTTAGTCGTAACAGCGATTAACGAAGGACGCGAAGCCGCACGAGAAGTAGATTTCTACCTCATGGGCGAGACGTTTCTACCATAAAAACAAAAGAAGGCTCAAAAATCTGTCGATGTCCAGTAGCGCAAAAACTACAGGACATCGACAGATTTTCTTTATTAACTGGTATGACAGGGGTTAGGCGAGTTTTACGACAAATGAAAGCAACGCCAGATTAGCGAAAAAGGCAATTTTGCTATCGGTCGACAGAAATAGACTCATGAGGTATGATGGGAGTAGGGCTAAAATAGCACGGG # Right flank : TTATCCAACCAATACGAGAACTAAATACTTCAACCTGAAAATTTTCTGAATAAATCTACTCAATCCACGCTTCAAAAAAATCTTTTTGTTGCGTTTTCCCTGCGTATTGTGTAATCTGAATAAGGAAGCTCTGCAACAACTAGCCAAGCTTTCACGCATGTGCAATAAAAAATGCAATCATACATAAAGGTGGGGTCGATATGAAAAAAGGAAAAACAGTATGAACAGATCTGTTTACAATTATGATATATAAAGTAGTACTATTCTTTCTGGGAATCATTTCGTGCATCATTTATGTCTTTTCGAAAAAGAAAGATTGATAGAAATAAACTGTCCAATCTGCTGGTGTGCAGGTAACCGCGAAGTTACTTGTGCCACGGCGGATTTTTTTATGCCTACTAATCGTTTAAAATTGACTTGGAGCCCACTTCAGGGTTTAGACTTTACCTAGGAAGCAAAAAAAGTGCAAAACTTGGAGGTGTACAAAATTACGGCACCCA # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAAGTAATGTGAAACGTAAAT # Alternate repeat : GTTTTTATCTAAGTAATGTGAAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //