Array 1 258600-258875 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCNV010000003.1 Parabacteroides distasonis strain DFI.2.17 LLFLANPG_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 258600 47 66.0 28 AGGT.A.G.ATT.A.T...A...........C....CAA........ TTGGGGCGAATGGTGACGGTTGGCTTGT G [258645] 258676 47 93.6 30 ...........T...T..................T............ TATATTTGGTAAATGGTCTATCAATAAGGT 258753 47 97.9 29 ................G.............................. GGTTTGAAATAGTGTCATATCCTTGACGT 258829 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 4 47 89.4 29 GTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACATC # Left flank : CCCGTGGGGGATTCGCCTGGGGCTGTCGTACAAGCAGGTTCAAGAGAATGCGTCGCTTTCCGGAGTGCTTACAGTTAAGCACCTCATTTATCAGCTCATCCTGTTTATCATATAGCCATTCGTTTTCCTTGGTCGAGAAATGGCTACAGACCCATAACGCTTGATAACTAACGGCATCATCCGGATCGAATATCAGATCGTATAGCTCTGCTTTCCGTTCTTGGTTCCCTTGTACATAAAATAATATCTCATGGATATCCTCTATATGACAGCGGCTTGATAGTCTATCTTTTAGGTCCATTCTCAATCTTTGTTGTTGTCTCTTTATCTTTTCTGCCGTAAAGTTATAGTCTTTTTAGCAAAGTTTCCCTAGTTCGCTTACTTTTGTGCCCCATTGATAAAAGAATGGATAGATATGCGATATATGAATTTATTAAATGACTTAACAATTGATTGTAAAAATAACGGAGGGTGTTACCGAGTAAAGGATCAGTTGAAGA # Right flank : CTCAATCTGTATTATATGCTGTATATCAACTAGATGATAGAATGGTTAGAAAATAAAAAAGAAAAGTTTCCAATGTAATAAATCCCGTTTTATGACGGGATTTATTATTTCTAGAAAAGCTCTAATTGTTGGCCGGGTGTATTAGGAGGTTGTACTTTTTTCCCATAGAACAACTCAATATTCCCAAATTGTTTGTCTGTAATGCACATTATTCCTATTTGCCCGTGTTCTGGTAAAAATGATTTTACTCGTTTTATGTGTACTTCTGCATTTTCTTGGCTGGCGCAATGTCGCACATAAATAGAGAACTGAAACATGGTAAAGCCATCACGCTGCAGATTCTTACGGAAATCACTATAAGCTTTCTTTTCTTTTTTTGTTTCCGTAGGTAAGTCAAATAATACCAACACCCACATAATACGATATTCGCTAAATCGATCCATGATTATTACCGTTCTGGATACACGATTCTTCGTTGCTCTCCACTGAAACATTTGTAA # Questionable array : NO Score: 3.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.47, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //