Array 1 81616-82507 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLQA010000007.1 Blautia sp. MSJ-19 M-19_ctg00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 81616 36 100.0 30 .................................... GACAAAACATCAGACAGCAAACACAAACTT 81682 36 100.0 29 .................................... TGCTGATGTGTACTATGGGAGAAGTACCA 81747 36 100.0 30 .................................... CAGGACCCGGCGGCTATGCTGCTATCATCC 81813 36 100.0 30 .................................... TTTACCAGAAGTTAAACCAGTGGGGACTTC 81879 36 100.0 30 .................................... AAGGACGCGCCAGACAAATAGCAGCTTCCA 81945 36 100.0 30 .................................... CGCGGAAGAAGCTATAGCCTATGACCCGTG 82011 36 100.0 31 .................................... AGCATACGGTTGAGCGCATGAGGAACATTGA 82078 36 100.0 29 .................................... CAGTATCTACCCCGGACTATATGCCGCCT 82143 36 100.0 30 .................................... TTGAAGCTGATTGACCCTAAACAGCCGGGA 82209 36 100.0 30 .................................... TATGTTGGATTTGAGGGCGAAATCTGGCAG 82275 36 100.0 30 .................................... GAAACGAAAAATGAGAACAGAGGACCAGGT 82341 36 100.0 30 .................................... AATATCCGGGTCAAGTTCAAAATACGCTTT 82407 36 100.0 29 .................................... TGTGGAAGGACAGCACCGCGTTCTTTGTC 82472 35 77.8 0 ..............A...AG.....-A..AG.T... | G [82493] ========== ====== ====== ====== ==================================== =============================== ================== 14 36 98.4 30 GTTTGAGAATGATGTAAATATGTATGGTACTCAAGC # Left flank : GGAAGATATTAAGTAAATTGTATCTGGAATTATCCGCTCTTTCAAAGGGAGAACAGATGTATGTCAAAACAACAGAACTTTTGAGATATTTACAGGAGTACATGCTGGATTTAGAACAGTGTACGGAATATATTCTTGAATTTGATGAGGAAGCAGATGTGACTGCATTATTGAAGGCAGTTAATGTTCATTATGAAACAAGTGATATGGATTTTCTGGAACGTTTGGTTCAATACATAAAAATTTTGGCAGCGATGACAGGGATAAAATTGTTTGTGTTTGTAAATCTCAGGAGTTATCTGGCAGATTACCAGATTCAGGAATTGATTAAAGAAATGAAATATCAGGATACCAGAGGATTATTTATAGAAAGCCAACAAAAAGGTTGCATGGAAGGGGTGAAGCAGTATATTATAGACGTAGATAGATGTGAAATATACTAAAATGTTTGAGTACCATGCATTTTATGCAGATGAGAGCATTTCATTTTTGGATTTGAG # Right flank : CGAACCCGGGGCATTAGCCTCGGGTCGTTTTCTTTAGTATAGAATTAAATAATGAAAAGAATGTGATCGTGGTCACGGTCGCAGCAATAATATCACTCACCGGCTCGGCAAGGAAAACCGCAAATACTTTATCTGCGAAGAAGTGAGGCAGAATAAAGATCAGTGGAATCAGAAAGATAATCTTTCTGAGACATGCAAGCAGCAGACTTACCTTTGCCTGTCCAAGTGCCATGAAACTCTGCTGGCAGCTGATCTGGAAGCCAACCGAGAAGATTCCGGTCATATAGATACGAAGTGCCCATGCAGAATATGTAACGAGTTCTTTATCACTGGTAAAGATTGTTGCAAATGCCTGTGGTACAAGCATGACGATAATCCAGAACAGAGTTGTGTAGATGATGCAGGCACAAAATTGAGTGAAAAAAGCTTTTTTTACTCGTTCAGGTTTATCAGCACCATAATTATAACTGATGATTGGCTGACCACCCTGACAGATACCC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATGATGTAAATATGTATGGTACTCAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 391-2863 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLQA010000031.1 Blautia sp. MSJ-19 M-19_ctg00037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 391 32 100.0 34 ................................ ATTTAATTTAAGATCATCTTCTTTTATAAACATT 457 32 100.0 35 ................................ AAAGAAAAAATGCTGGGTAAATGTTGGGGGCGGTC 524 32 100.0 33 ................................ ATACTCAGCAAGTTTCTTGCAAGCCTCGTACAA 589 32 100.0 35 ................................ TCCATTTGACCTTACAACCCTGACCGGCCTTGACT 656 32 100.0 34 ................................ TCCGCAAGGACAGGCTGCTTCCGTCTCCTGGATC 722 32 100.0 33 ................................ TGAAGAAGAATGCAGGAGACGGTTCGCAGGAAG 787 32 100.0 36 ................................ TGATGCAGGAGAGCTCTCTTGTACACCTCGCGGGCC 855 32 100.0 34 ................................ AGACCTCTATGGATGGAGGCGTGGAGACCACGAA 921 32 100.0 34 ................................ CATGTCTGCTGAGGTCCAGCAGACCATCAAGAAC 987 32 100.0 35 ................................ TCATATAAGTCTGTGGTATCTATGTCCCACTCTTT 1054 32 100.0 33 ................................ TGAATGATGCCTGTCAGGATCATCTGGATCAGT 1119 32 100.0 33 ................................ CCATCTCTGTGATCCTGATGATTACGAATCCCA 1184 32 100.0 35 ................................ ATCAAACTCTCGTCGATGTTTTCTTGCACTACGCC 1251 32 100.0 34 ................................ CAATTATCGGAGTAAGAAAAACAGTCGGCGGGAC 1317 32 100.0 34 ................................ TCTTCGCGTAATCATTTCCCTTAATTCGATCATG 1383 32 100.0 32 ................................ TTGTGTCGGGTCCTAAAAACTGTTTATATGGC 1447 32 100.0 34 ................................ GATCATATGCAGGATATCCAGATATCCGTTATTG 1513 32 100.0 34 ................................ CTGCTTTTTGTGATGCTGAAGTTGTTGTTCCTGT 1579 32 100.0 33 ................................ ATTGTGATCGTATTTGCAGAATCTCGGCTTTTT 1644 32 100.0 35 ................................ TGATGTATTATTGGCACTATTTAAGATGGCGGGCG 1711 32 100.0 35 ................................ ATTTTTGATTGCAGCTGATAAGACCATCGACATTG 1778 32 100.0 33 ................................ TTGGAAGATATAATAAAAAACTCAAAAAATATG 1843 32 100.0 33 ................................ GATGATTCAGTAAAGCCAGAGGAACGGCTGGAG 1908 32 100.0 35 ................................ AAGCCTGGGAGGAGTAACATTTACCAGAAAAACAA 1975 32 100.0 33 ................................ CATGTTCTTTTCCTCCTCATATTTTTCATGGTT 2040 32 100.0 34 ................................ AATAAAACAGAGTATGAGAAATACTATCGTGCAA 2106 32 100.0 34 ................................ TACCTCTGAGCTTTCTGGCATCTGAAAAATAGTT 2172 32 100.0 33 ................................ CCTCGTTGTCTTTAGCTGTTAATCCTCTGGTAT 2237 32 100.0 34 ................................ AAATTCTTCGTGTAGATCATCCATGAACCCTAAC 2303 32 100.0 35 ................................ TCCATTTGACCTTACAACCCTGACCGGCCTTGACT 2370 32 100.0 34 ................................ TCCGCAAGGACAGGCTGCTTCCGTCTCCTGGATC 2436 32 100.0 35 ................................ AAGACTGGTCCTGGAAACGCTGAAAGCTTTTACCT 2503 32 100.0 34 ................................ ATATAAATGGCTTATACAAAGCCAGGCAATCACT 2569 32 100.0 34 ................................ CGTTGAAGTTGCCCCAGGCAAAAAAGCCAATGAC 2635 32 100.0 34 ................................ CGTTGAAGTTGCCCCAGGCAAAAAAGCCAATGAC 2701 32 100.0 33 ................................ CTTGGAGTAAGTGCTGGTCTTGCAGATACAGTG 2766 32 93.8 34 ...G.........T.................. ATCATTACAACACATTCATCGAATGGCATAGTCA 2832 32 75.0 0 ...G....TT..AT.........A...A..G. | ========== ====== ====== ====== ================================ ==================================== ================== 38 32 99.2 34 GTCATTCCCCACGCGGGAACGTGGATTGAAAT # Left flank : GCATGAGCGGTATTCACTAGAACAAAAACTCAATATAAGTAAAAAAGATAAAACAGCACTATCGCATTGTAAAAAGCAGTTACGCTTGATTGCTATTGAACAACAAAAAATGCTTGCGGCGTAATACTTTTTATACCTAAAGGGAATTTACACACAAAAAAGGACTTGACCATCAAAATGAAAAAATTCAGATTGGATTAGAAAGTTAAATTTGTCTGGAGTGCGAACTGAGAGCGCACATAAAATCACTGGAAGGTTCGCACTATAAAAAATCTTAAAAACTCTATAAATAAAATTGACAAAGTAAAAAAATGATGTAAGAAACAATTATTAAATGAAAAATTGTATTATATATACAAAAATATAGAGTTAAATTTGTTTGATTTTGCTG # Right flank : TAGGAGAAAAACGTATGAAATATCTAGCACATCGAGAGAAAGAAAGAGAACAACTATTATTAGACCACCTAACCGGAACAGCTGAAAAAGCAAGAGGTTTTGCGGAAGCCTTTGGTAAAGGTGAATGGGGATATTGCTGTGGAATGATGCATGATCTGGGAAAATACAGCGAGAAGTTTCAACGACGGGTTCGGGGCGAGAAGATAAAAGTAGATCATGCTACAGCAGGAGCGAGAGTTTGTCTGGAGCTGGGAGGAATGTATCCATTTCTGGAATACTGTATTGCAGGTCATCATGCTGGTTTACCGGATGATGGTGGAGACAGCGATGCAGGAAATTTCCCAACTCTAAAAGGGAGAAGAAAGAAAAAAATAGAAGATTTTCAAGCATATGAAAAAGAAGTTCATATTCCAGAATTAAAGACAGTACCTATTGACATAAATAAAACTAAAAATGCAGAGTTTTCTTTAAGTATGTTTATGCGAATGCTGTATTCCTGC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATTCCCCACGCGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 2 11672-12893 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLQA010000031.1 Blautia sp. MSJ-19 M-19_ctg00037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 11672 32 100.0 35 ................................ TTCGCAAACGTACCGGATTTCCGAAAGATCTTCTT 11739 32 100.0 36 ................................ GGTACATGATAGATCAGCTTTAATTCCGGGTGTCTG 11807 32 100.0 34 ................................ TGCCGGAAGTTCCAACACTGCTGCCGCTTTCCCG 11873 32 100.0 34 ................................ TTAAATGTTGCTTATGATCTTTCCAGTTCCGTCC 11939 32 100.0 34 ................................ CCCCTACGGGGGAAAATATTTAAAAAAGTTTTTC 12005 32 100.0 35 ................................ AGCAGGGCACAACAACAATCCGAAGATAGCAATTC 12072 32 100.0 33 ................................ CTAAAAAATGAGCTACATTTAGAAATCAGTCCC 12137 32 100.0 32 ................................ AATGTAAATGCTATTCCTCTCCTGTCGGAAAC 12201 32 100.0 33 ................................ ATGTAAAAATCAGTGCATTGGGGCTGACAAAGG 12266 32 100.0 36 ................................ ATGGAAATACTGTTTTTGAAGAACAGTAGAGCGCTC 12334 32 100.0 33 ................................ TTATCCGATCACTGGAACGATGCCACAGGAGAA 12399 32 100.0 33 ................................ GATAGAACGTTTTGCTGAGATCTGGGATGGTAC 12464 32 100.0 33 ................................ TGTGCGGGCGTATCGTTGATCGACTGTGCCATC 12529 32 100.0 36 ................................ ATGGAAATACTGTTTTTGAAGAACAGTAGAGCGCTC 12597 32 100.0 34 ................................ TTAATATAAGACTGCATCTGCGTTACGGTAGCTG 12663 32 100.0 34 ................................ TGATGTACATACCGGATATCCTCGATCACATCAA 12729 32 93.8 35 ............A...........G....... AGAAGGAATAACGCCTGCTCATTTTTTGTCCCCGC 12796 31 90.6 35 ..........-..T..........G....... ACCGATACAGTATATACCCACCCGACAACATCTGG 12862 32 93.8 0 ..........C........T............ | ========== ====== ====== ====== ================================ ==================================== ================== 19 32 98.9 34 GTCGTTCCCCACGCGGGAACGTGGATTGAAAT # Left flank : CAGTTATCCGGTATTTTTATGGAAATGAGGTACTGTTATGTTAGTATTGATTACATATGATGTAAATACAGAAACGAATGCAGGGAAGACACGTCTGCGTAAGGTAGCAAAGCAATGCACAAATTATGGAAGAAGAGTACAAAATTCTGTTTTTGAGTGTATTGTGGATAATGCGCAGTGTGTTGAATTAAAGGCAATATTGTCTGATATTATCGATAAGAATTTGGACAGCCTTCGCTTTTATTATCTGGGAAATAATTATCAGACAAAGATAGAACATATCGGAATAGAACGAGGGATTGCAGCAGATCAGTTTCTGCTTTTATAAAGTGCGAACCAAAAGCATACAGAAAATCCCTGGGAGACTCGCACCATAAAAAACTTAAAAAAGCGTACGAAAGAAATGAATAAGATAAAAAATTCAGAAAGAAGGAGTGATGTAAAATGCAGATTTGTAATACCTATACAAAAGTATAGGTAAAAACTTGTTGAAATTTGCA # Right flank : TATAATAATGTGATGGTGTACCCTTATCGGGTGCTACGTCGTTCCCACGCGGCTATACATGAAGTATATATACTGCTGTTATCATTGAATGTGCGAAAATTTTTTTATGCAAAAGTTCTTATATGGCTGGGGTGCATCCGACCTTTCAACAAAAAGAAAAGCCATTTTTGAACATTGCAAAGCAACAATGCATATGTTATAATGCCATTAAGAAAAAGAAATGGTAAGTCCATGTGGGACAAAAAGAATGAAAGCCCTTGGAGCTGCAACTCCTTGGGCTTTCTTCTCGATTAATTATAGTGGACAATTAATGATTACAATACAGAACAAAATGAATTAGAAAAGAAAATATAGCATTTTATTAAAAGGAGCACCGCACATGAACGAGTTACTAAATAAAATCCGCACTCAAAATGCCACTGCATTTACCCACAGCGGCAAATTTCACGCAGATGACGTTTTTTCATCTGCACTGTTATTATATTTGAACCCGGAGATCA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCACGCGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCACGCGGGAGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //