Array 1 2263545-2261922 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044506.1 Lacticaseibacillus rhamnosus strain BIO6870 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2263544 36 100.0 30 .................................... AAGAAACGATCCCGAGTTTCTGGATTGCTT 2263478 36 100.0 30 .................................... TCATCAGTATTCATGGAAATATAGGATGCT 2263412 36 100.0 30 .................................... ATCATCGAATCTTTGGGGACCTTACCACTT 2263346 36 100.0 30 .................................... GATTGTTTCGGTTGCTTCTGTGATGCCACC 2263280 36 100.0 30 .................................... ATGACTGGTTGCCGGTAAGCGATGAGTTCA 2263214 36 100.0 30 .................................... CATACTTGTATGAGCACTTTGACTTGTCAA 2263148 36 97.2 30 ....................T............... ACCGTTTGTGTTGCATGAATATGATCACTA 2263082 36 100.0 30 .................................... AGGTGCTATGCCGCTTGGCATGACGATTGA 2263016 36 100.0 30 .................................... AATAATATTGTGCCAAAAGGTAGTATTCTA 2262950 36 100.0 30 .................................... TCCAAGGGCATTCCAGATTGCAGAAGCCCC 2262884 36 100.0 30 .................................... GGGTGATGCTGACAAGATCAAGACGGCTGT 2262818 36 100.0 30 .................................... CGCCTTACGGGCGACAGCTAGGCCTATGGG 2262752 36 100.0 30 .................................... AGATCGAGCATTACGGCTTGCAAGACTGCG 2262686 36 100.0 30 .................................... ACAGTTGAGAAAAGAAAATACGCATTTAAA 2262620 36 100.0 30 .................................... AAAAACACAAATGGCCGCTGCCACCTTATG 2262554 36 100.0 30 .................................... AAAAAAGCCGCGGAACTTCTCGGGCTAGAC 2262488 36 100.0 30 .................................... CACAGTGCCATTCCACAAACCCGACAGAAA 2262422 36 100.0 30 .................................... CGAGCTTGCGGCCAATATCAAGCTATATGC 2262356 36 100.0 30 .................................... GTGTGATCATCATTACCTCTCTGCCACTAA 2262290 36 100.0 30 .................................... ATCGCATACTTCATGATGATTGATGCCAGT 2262224 36 100.0 30 .................................... CTGTGTTCTCACGTGTCAACAATTATTTCA 2262158 36 100.0 30 .................................... TTGTGGTGCCAAAACGGGTTGTTGTCGAGA 2262092 36 97.2 30 ...................................G TTTCAGCAAATATGACGTCTAACATGCCTC 2262026 36 94.4 30 ..................................AT ACTTGGAAAAGTTGCTATGCAGTTTGAATA 2261960 36 83.3 0 .......................AA.A....G..AA | T,CA [2261925,2261931] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 98.9 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTCCAACGCTTGATCATCAAGAAGGTAAGTCAATTGATAGAGGATCGGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTAAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTGAACAAGCTGTTAGATCAGGTTAAGGAAACATCGTTAGAATTACTTCTCATTGAATTTTCGGATGTCGAACGTAGAAAGTTTTTTGAGAGGTGCCAGTATATCTATATTGACAAAGATTTCATGGATAGCCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : CCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTATCAACAGGCGTTCAAATCCATTTACGACAAATATCAAGATCGGGAAACCAACCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAAGTTCAAACGGCATAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGTCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCTAAATTGGTACATTTGTATCGTAAAGTCGGCTTTCAGCAGCTGCCAGATCGGGAAACAACGATTAATGAGCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //