Array 1 129650-130661 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZKT01000019.1 Enterobacter chengduensis strain CIDEIMsCOL9 contig19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================================ ================== 129650 28 100.0 32 ............................ AGGAAGGGGAATTGACCACGGTCAAAGAGGTA 129710 28 100.0 32 ............................ TTGACTTTAATCATTCTGCTTTCCGTGACGTC 129770 28 100.0 32 ............................ GCCAGCAGAATAAGGTTCAGACTCTAAATAAG 129830 28 100.0 32 ............................ CTGCCGGGGGCTGCTCTGGCGCCTGCGGCGCC 129890 28 100.0 32 ............................ AACAAGGTATTCCGCGGATGTTCTCAAGACAA 129950 28 100.0 33 ............................ TCTGCTGGCTGGCTAACAACCTGCATCATTGCC 130011 28 100.0 32 ............................ TCTTCATTTGGTCATAACCTCTTTTTTTAGTT 130071 28 100.0 32 ............................ TGGCCGCCGTCGCTAAGCAGCACGCTATCTCT 130131 28 100.0 32 ............................ GACCGGCTCCGTCGTGGACTGGGCGAAATGGT 130191 28 100.0 33 ............................ CTGAAGGTATGGGAGAAGAACGGTTATCGCCGC 130252 28 100.0 33 ............................ GGATTGGTCGGCACTTTCGGCGCAAACTGTGAT 130313 28 100.0 33 ............................ TGTCCAGCTCCAGTTCTCCCAGGATGGACTTGA 130374 28 100.0 32 ............................ CAGCGCGGTGCCGTACCACGTCAGCCGCAGCA 130434 28 100.0 32 ............................ GTACGAGACTGGTGGGCCTTCGCTGAGAAATT 130494 28 82.1 112 .....................AATC.C. CCTGGTTATGTCAAACACTGTGCCGCCTGATTATAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAAATAGCCAACATGGGGAAAGTAGGAACAGAGTCAATTAAGTTTT 130634 28 82.1 0 .....................AATC.C. | ========== ====== ====== ====== ============================ ================================================================================================================ ================== 16 28 97.8 38 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACGGTTTGCACAAGCTTTTTGGCGGCGTGGGCTTTATTAGCGGCATGCTGGTGGAAAAAGGATTGCCGGGATTTATCGCCTACGGCGTGTTGGTTGGTGAAGTGGTTGCGCCGATCCTGATTATTATCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATTGTGGCGTGGCTGATGGTGGGAATGGGTGAAACGCTCGCCCTCGATAAGGTAGGTGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCGGTGGCGTTTTTAGGGGCAGGGCGTTTTGCGCTGGGGAAAGACCCGGCGTGGCGTTGAGGTTTGGGCTATGGCATGAAGGAAGGGGTCTACGGACCCTTTTTTATTGGTGATTTTTAACTCATTGATTTTATTGGGCTGAAATATATGCGAAGAAAAAGGGGTTGAGACGATTTTTTAGGTAATTTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCCA # Right flank : ACCTGGTTCTGTCAAACACTGCGCCCCCTGATTATAAACCCGGTGGCGCTGACGCTTACCGGGCCTACGAAGAGCCAACATGGGGAAAGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAACGGCGGCACCGCGTCAGATTATACGAGGACCAAATCCCCCTGCGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCCGACAGCGTCATGGTGCTGGTGACGGTATACTCCCCGGAAACTACCTTCGTCTTACAGCAGCCGCACACGCCGGCGCGGCAGGCGGCCACGACAGGCACCTTGTTGCTTTCCAGCGCCTCCAGCAGCGTGGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTGAACTGAATCCCGCTGGTTGCCGCCTCCGCCACGGGCGTGAAGAACAGCTCCTTGAAGAAGCGGGTCACGCCAAGCGCTTTCACTTCTTTCTCTACGCTGTCCATGTACGGC # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.45, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 53895-53151 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZKT01000026.1 Enterobacter chengduensis strain CIDEIMsCOL9 contig26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 53894 28 100.0 32 ............................ TCATCTTGTTTCGCTCGTTTACCAGGTCTACT 53834 28 100.0 32 ............................ GTGGGACAAGGTGACGCAGTCGGTACGCCATA 53774 28 100.0 32 ............................ ACTTTAGAGAGAATCTGGGTAAAGCCCGTCAT 53714 28 100.0 32 ............................ ATTGACCGTCTTTCTCGTTCAACGATGGACTT 53654 28 100.0 32 ............................ GAAAACGAAGCCGCCAGAGAGCTTACCATCAG 53594 28 100.0 32 ............................ TGATACAATCTTTCGGCAAATGTACCGATTAA 53534 28 100.0 32 ............................ GTCAGGGCATGGTGTGCAAACTAGCGGGGCGA 53474 28 100.0 32 ............................ TGCAATGCGACAGGGACCAGGAGAATATTCGG 53414 28 96.4 32 ...........A................ GCACGTTTGATGCCCGGACGCGACGCGCCCGC 53354 28 100.0 32 ............................ GACAGACGGGCGCGACTGCTTCGACTGATAGA 53294 28 92.9 30 ............G.........C..... AGGGAATGGTCACCATCACCACAGAAGAAA 53236 28 92.9 30 ..............CC............ ATAGAAAATAAGGTCTCTTCCCCTTACTTT C [53211] 53177 27 75.0 0 C.A.....T..A....A....C.-.... | ========== ====== ====== ====== ============================ ================================ ================== 13 28 96.7 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCTACGTTACGTTCATTAATTCCGGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGGATATTGTCGAGCACGCTGACGGGTAACCCCTGATTGAGAAACTCAATCAGCCGCATACCCCTGTTTGCAGGTAAACCAGCGTACCGCCAAAGCGCGTTATCAGCAGGTTGTTGGGCGGGGATCCATGTTCTCATGTTACCTCCTGGTGAGTGTCATTTGTCATGGCTAAGTATAGTCATTTGTCAGGTGGAGTGGAATGGCGTTTTTTTATACTGGGTGGTTTAAGAGAAGATGGCGTTTGACCCTAATTTTTAGGGTGTTTGTAATGCATTGATATTAAATGGATATTTGAGAGGGTAAAAAAGAGGGTAAAAGAAGGGGTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGAAGATATTATTTCA # Right flank : CGAACCGCCAAATAATTGTTCAAATAATCGACTGCACCACAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCATTTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAGGATAAA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 64553-63384 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZKT01000026.1 Enterobacter chengduensis strain CIDEIMsCOL9 contig26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 64552 28 100.0 33 ............................ CTGGGTTAAACTCCATGCCTCGCTTCTCTACGT 64491 28 100.0 32 ............................ TGAACTTCTTTACCGGCTATGATGCTGCCAGC 64431 28 100.0 32 ............................ GTAACCGGGATTAAAACGTCGCCGACCAGCTT 64371 28 100.0 32 ............................ CCAGGCTGATACTGCGTTACCAGTGCCGGACA 64311 28 100.0 32 ............................ GATACACCCAGGCATGGGGTTTCTATCGTGGT 64251 28 100.0 32 ............................ ACAACCATTTTTGATAATTCATTTTCTACCTC 64191 28 100.0 31 ............................ AAAAGCAAGCGGTGACGCGCAGAGCCAGGAG 64132 28 100.0 32 ............................ ATCACCGCAACAGCGAGAACGGCAAGTTAGCA 64072 28 100.0 32 ............................ TACTCGCTCAAGTTGTTTCGTTGATACGTGGT 64012 28 100.0 33 ............................ CCTGAACCAGTCAGCGCCGCTGTATGCCCCGAA 63951 28 100.0 33 ............................ AGTACAATACGGGGCCTGGCCAACACCGGCGAT 63890 28 100.0 32 ............................ CGCCGCTGGCGTTAATTGTAATTGTCATATTG 63830 28 100.0 32 ............................ CCCTCGTTTCTCTGCAATAACTTTGGCTATCC 63770 28 100.0 32 ............................ ATTCGAATCTCTGACTACAAGCGAAACATTGA 63710 28 100.0 31 ............................ TCGCACCACAACCCAATACGAGCCATAGCCT 63651 28 100.0 32 ............................ TGTCAAAACTCCAGTTTGAAACCAACGACAAG 63591 28 100.0 32 ............................ TGACCAGGCAGCTCGCCGCGCTGTCAGCTGAA 63531 28 92.9 32 ...T.............T.......... AATAACTGCTGCGCTCGATCGGCTGGTGGGTA 63471 28 100.0 32 ............................ ATCGAAACGAAACATCGACAACTGAGCGAAGT 63411 28 67.9 0 ...........C......T..CCCTCTC | ========== ====== ====== ====== ============================ ================================= ================== 20 28 98.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCCCAAACGCATCCCGTATGCCGCTGTCTTGGAGCCTGGCTGGAAGAGGTGAAATCCGGGCTTACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGACGAAGTGGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACCGAAACGAAATGCGACTACTGTCGGGCGTTAAACCATGTGCTGCTGGTGGCGAATTTTGACGGCGATATGTTGCCGCACATCACGGGGCTACTCCATGACATTACGCATTCTATGGCCGCAGACGTTGTTGCCCCTCGAAATGCAGAACCGGTAATTCACATTATTTCCTGAGTTCGAGCCCAGGCGTCGGGGGCATTTCTCTGACGCCGTTGCTGTAACCCTTTTTTTTGATGTATACGTAACGTATTGATTTATATGATGAGGATTTACGTGCCAGAAAAAAGGGTTTTATACGTGTAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTCGTTTCTTTCCA # Right flank : AAACCAACCCACCGTATAATATTCACCAAACCAATTTAAAACCTAATCCCATCAAACCTGCACTCTCTATTTTCACAATAAATAAAAAACCCATTCATGCATGAATTATATTCTAACGAATATATTATTCGCAAAAATAATACTTCAGCTAAAAACATGATTTTCCACTTCATTATCACGGTGATTATTATTCATTTGATACCCGTCACATTTGTTTCCATCCGATGTTCGCTAACATATTGCGCATTCAACACCTTGAAATAAAAGCCCTTGCCATGTCCGTAAAGAGCATCACCCCTACAGACTTAAAAACCATTCTGCATTCAAAGCGTGCCAATATTTATTATCTGGAGAAATGTCGTGTTCAGGTGAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGACAAGAGTCGTTTTACTGGAATATTCCCATCGCGAATACGACTGCGGTGATGCTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGCGAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //