Array 1 86-534 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASGK01000137.1 Acinetobacter baumannii TG27391 TG27391_138, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 86 27 85.7 32 TAA...-..................... TGCTCCTGACGAGCTAAGACGGCGCGGCCACT CC [91] 147 28 100.0 32 ............................ ATTGAAGAAATCAGGAAGAATGCTCCAGAGGG 207 28 100.0 32 ............................ AAACTAAAAATACAAATCAGTTGTTTTGATAT 267 28 100.0 32 ............................ TAGATTGTATGTAAATGATGCCAGTGCATCAA 327 28 100.0 32 ............................ ATTGTGGTAAGCTGTTGCATTAAATTTTATAT 387 28 100.0 32 ............................ TCATAGATAAATAGACAAAAGGGGCCGTTAAG 447 28 100.0 32 ............................ ATTGGATGCCATTACCCAATCCACCAAAAGCA 507 28 89.3 0 ..........A.G..............G | ========== ====== ====== ====== ============================ ================================ ================== 8 28 96.9 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TGAACAGAAATCATAGGTAAGTCTAGTAATAGCACTGGCCATACTGACCGTGCTTTGTCCATGATCGCGTGAAGTTGTTTTTCAAT # Right flank : GTATTATTTTCAGTTATACTTATGCAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAGCCAATTATTTCAGTGAGATAATTGGCTTAAGTGAGAGTTGCGATTATCCGCTAATTCGTCGGTCATCCCAATAACACGGCACTACAATCAAATGGTTCTCATGTAACCGTGACCATAATCGGACACCTAAATCCCGCTGCATATTTTGGACTGTGAAATTGGAAATCAGTAAGGTAGATTTCATATTGTCATAACGACTATATAGAACCTTATGTACCATCTCTAAGCGTTTTTCATGCCGGTCATGCAGGCCATATTCATCAATCACCAATAAATCAAAACTGGAGAAATGGTCGATGACTTCTTTCTCAGAGCGTGAAGTGTCTGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTGGTATAGTAGCGTGCAGATTTTCTACTGTTATGCAGAATGTTGCGAATAATTGATGCACTCAGATGGGTTTTAC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 91-2520 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASGK01000044.1 Acinetobacter baumannii TG27391 TG27391_45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 91 29 96.6 31 ............................T GCAGTTCTGCGTTACGTGTTTCAGGATGCAT 151 29 96.6 31 ............................T AAAACCATTGTTACTAGATGTACCTGTATTT 211 29 100.0 31 ............................. GTCAGGCCCTAGCTTTTGAGTCACACTTTCG 271 29 96.6 31 ............................T TCTGCACTCTGAAGATAAACATTACAAGTAA 331 29 96.6 31 ............................C TCAAGACATCAAGATCAATAAGACAGTTGAG 391 29 100.0 31 ............................. ACAACGCAGTATTTTTGCGATGTTGCAAAGC 451 29 96.6 31 ............................T AATGCTCAAAGTTATAAAAATAAGACTCCTG 511 29 96.6 31 ............................T CAAGGATTGACTCACAAGATCGGTAATTGTA 571 29 100.0 31 ............................. GTCTGACCATGGCCCGATATTCCCGATCCGG 631 29 100.0 31 ............................. TTAGAACCAAAAGTTACTTCAAAAGAACGAA 691 29 100.0 31 ............................. ACTATTCCTAAAATAATTGATACATAGATAA 751 29 96.6 31 ............................T CTACAGCAGCCGTCCAACGGTGTGTATCGAT 811 29 100.0 31 ............................. TCAACAACAATGGTTAAACTGCCATTAATCA 871 29 100.0 31 ............................. AAGACAGTATTTTGGTAGCGCATCTCCTGCC 931 29 96.6 31 ............................C TTGTACGAGCGTATTAAATGTACCTTCATCA 991 29 100.0 31 ............................. ACCGATGAAGCACGAAACACAATCATGCTTT 1051 29 100.0 31 ............................. TACGGCGGATGATGTGGTTCGCCTTCATAGC 1111 29 96.6 31 ............................T TTAGCCACAGCACCGTTTACACTTGGAGCAG 1171 29 96.6 31 ............................T AGTGCACGTAGGTCATGAAAAGATGGGCGTT 1231 29 100.0 31 ............................. GAAGTACGAATCAATGTGAATGAATAACCAA 1291 29 96.6 31 ............................C AGTAACAGCAAAAACAAAAACAGTAACTAAA 1351 29 96.6 31 ............................G TACAGGGGAATTCACGTAGTGCTGGAACAAT 1411 29 100.0 31 ............................. ATCACCATCATCGGTGGCATTAGCTTCAGAC 1471 29 100.0 31 ............................. TCACCAGTGCCAGTGCCAGTGCCAGTGCCAG 1531 29 100.0 31 ............................. ATATTCAAGAACCAGTTTCAAATATTGTTAT 1591 29 96.6 31 ............................G TATGTAGAGTTGAAATGTAGTCCTGCGAAGA 1651 29 100.0 31 ............................. CCACTTGTCTTGACAGCAACTATTGAATCCA 1711 29 100.0 31 ............................. TCTCCCATTCTTCATCTGACTTCAGAAAATC 1771 29 100.0 31 ............................. GAATGTCTAAAATATCTGAGGCATCAGCAGA 1831 29 96.6 31 ............................G TCATCAATACGCTTCAGTGCATCAATGTCAT 1891 29 96.6 31 ............................T AACAGAAGCGCAAAAAAAAGCGTATATCATT 1951 29 96.6 31 ............................T TCACCTGCAAAGTAAATCGCATAAATCTCGC 2011 29 100.0 31 ............................. ATTTCAGCGTCAATAGTCTCAATATGATCGA 2071 29 100.0 31 ............................. TCCCGGAAGGCTTGGCTAAACTTGTACTTTT 2131 29 96.6 31 ............................T CACAGTATGAAAAGATTGGTGATGCTTCGGA 2191 29 100.0 31 ............................. CTTGATGCAGGTCAGTGCAATAAAAATGATC 2251 29 96.6 31 ............................G ACATGGCTATGAAGTTTTATACACATACAAT 2311 29 100.0 31 ............................. CAACAACGCTGTCAACCTTTAGCTAATAAAT 2371 29 100.0 32 ............................. TTAAGCCTTTGATTCCATTGGGTTTTTCTTAG 2432 29 100.0 31 ............................. AGAAAGGTCTAGCAATTGGGGCTGTAGGTAC 2492 29 89.7 0 ........................AT..T | ========== ====== ====== ====== ============================= ================================ ================== 41 29 98.3 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : GTTGTAACCTAAATTTTAGCAACTTAGGAAAACTTTACCTTCAAAGGCTTTATGCAACAAAGCCGTTTTAAGGTGTAACTGGTGCAATCAG # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAAGATGGCGTCAATTGAACTAAAAACATAAATACTTGAATTTTATAATATTTTGAATTTAATAAAAATTATGTGATACATATAGTGATACAAAGTCGATTTAATTAACTATGAAACCTGAGTTTATACAATTATCCCAACTTTTCACAAAATCTGTTTCATGATAGTAAATACTAGCTTTCAAATTATCTTTTAATGCCTTTTTCATTTCTAATGAACGTCCATCAAGTTGGTCATCCGTATATTCAAGATAGTAATATTTGAGTAAATATGAAAACCCTGAGCCATCTCTAATTGATTGACTATCCCCATATTGATCTGCAAACTTTGCCAAATTAGGGAAATCAAAACTGCTAGAATTGTATGACCACTGACCTTTGACATAAATAGTCAATAAATTCATAAAAGTATCTAAAAATTCTTTTTCAGACATTCGGCTAGGATTCAT # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.82, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1927-38 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASGK01000051.1 Acinetobacter baumannii TG27391 TG27391_52, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 1926 29 96.6 31 ............................A ATTCGTTTTTAAGCCATGTCAGCTTGTTATT 1866 29 100.0 31 ............................. CAGCCGATGCAGATTTCCTTCTCGATTGTGC 1806 29 96.6 31 ............................A ATCAAAGTCGATCCTGAGCATCATCACATGC 1746 29 96.6 31 ............................A ATCTTTTCATACTGTGATGTATCAAAGTCTG 1686 29 100.0 31 ............................. TGAGGGTACTGCAATGAAAGTTACTGACCAC 1626 29 96.6 31 ............................A ACTGGTTTATTGTTTATCGCATTTACTACGT 1566 29 100.0 31 ............................. TGTGACCGAATTGGATCGGTCACAATTCCCC 1506 29 100.0 31 ............................. GATATTAAAAACACGTGTTCTGGGGCGTCTT 1446 29 96.6 31 ............................G ATCTGATGAATCCTGAAAAACGTAATGCAGA 1386 29 100.0 31 ............................. TGTCGGAGTGTCTAGACTACGCCTTGAGACA 1326 29 100.0 31 ............................. ATCATTCAGTTAATAGGTCATTTGGGGGCTT 1266 29 96.6 31 ............................A TTCATAGCAATAACAAGCGATTTAGAGCGCA 1206 29 96.6 31 ............................A CGACGTTTGATGCAGTACGACAATGCAGTAA 1146 29 96.6 31 ............................C CTGAGCCATTAGCTAAAGAAAGCAGCTTTAA 1086 29 96.6 31 ............................A GTTGTTCAAGCTGTCTCTGCTGTAAGTCAAA 1026 29 100.0 31 ............................. CCATTGTCTTAAGGATTGGGTCAAACGCTAC 966 29 100.0 31 ............................. AAAGATACAAAATTTATCTGGGGATAGAGTC 906 29 100.0 31 ............................. AGCGGAATCAAAATTGCAGCAGCAGCTACAG 846 29 100.0 31 ............................. GCTGATCCTGCTTTAGTTGATCCTAATGATC 786 29 96.6 31 ............................A ATCATTTGAACGCCTGGATTCTTTGCATAGA 726 29 96.6 31 ............................A GTATTAGCACAGCAACCAACAATATGAAATC 666 29 96.6 31 ............................A CGTAATGGTAAATCTCAATTTATGGTGAAAA 606 29 100.0 31 ............................. CGGAAATGTTTGGATTTGCTTTCAACTGCTG 546 29 100.0 31 ............................. CGTTTTCTTCATCGGTATAGGAAGCTGCTTT 486 29 96.6 31 ............................C TATATCTGACCAAGTATATGAAGTACTTAAG 426 29 100.0 31 ............................. TTAAAAGTCAAAGCAAACTCTTGAAAAAGTT 366 29 96.6 31 ............................A GCAAAGACAGGCTTAGAAGTCACCTGATATT 306 29 100.0 31 ............................. TTACTTAGCAGCCCAAATTTATTCTAACAAC 246 29 96.6 31 ............................A TAATTACTTTAAGCAACAACCACAAGGCTTT 186 29 100.0 31 ............................. ATGCAAATTTTAAATAGTTAAATTGCGAAAC 126 29 100.0 31 ............................. ATTAAATCAGGCTGTCAAAATGGCGCGACTT 66 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =============================== ================== 32 29 98.4 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : TAGAAATTTTTGACCTAATGAGCGTGCTAATCACACA # Right flank : TTGATCTGAATATACGGTGCATAAGACGAATCGTTCTT # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 949-79 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASGK01000067.1 Acinetobacter baumannii TG27391 TG27391_68, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 948 29 100.0 31 ............................. TAAGGGGTCAAACTATGAAATTAACCGATGA 888 29 100.0 31 ............................. CCGACTGATCCGCCTGACCAACCGCCTCCGA 828 29 96.6 31 ............................A TGTGCGATCATTAGCATTAGGTGCAGATTCT 768 29 96.6 31 ............................A CCATGTGAACATGCATGCATTGATGCAATAT 708 29 100.0 31 ............................. TTTTAGGCATGTGTGGCGGTGATAAAGCAAT 648 29 100.0 31 ............................. TGCACTAAACGCTTAGTTACAGACCAACCTT 588 29 100.0 31 ............................. GAGCCGTCAGTCGGTTTAAAATCAACAGCTT 528 29 100.0 31 ............................. AACTCTATTGTTGTTATCCCGACATCTATTA 468 29 100.0 31 ............................. CTATTTTTCCATTCGGCACATGCTTTTTTTA 408 29 96.6 31 ............................A TGACGCTGTTGCAGCTAAAGTCATTTCCAAT 348 29 96.6 32 ............................A ATTACCCCAATTACTGCTACAGCACCCCCAAT 287 29 96.6 31 ............................A AGTCTCGGTAAACGTAGAGATAGAGATACGC 227 29 100.0 31 ............................. GTTAGGAGCCAAAAACTCACTTAAGATAGCC 167 29 96.6 31 ............................A TAGTCGCTTGCGGTACGATCTTAGCTGCACC 107 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 15 29 98.4 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : TAGAAATTGATCTGAATATACGGTGCATAAGACGAAT # Right flank : AAATCAGTTTTAAGGGGCTTTGTTGCACAAACCTATCTCTAAAGGCTTATTCCACAATATAATTTTCAAATGAATAAGT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 10442-17198 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASGK01000243.1 Acinetobacter baumannii TG27391 TG27391_244, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 10442 30 100.0 30 .............................. ATACGCCTCACGTTATTTCACGACCTGAAG 10502 30 93.3 30 ............................TA CAAGCGATTTTGCTTGGATGGGTGGTGGTA 10562 30 93.3 30 ............................TA GAACACCTACCCCGCCTGCAACGGCTGCAC 10622 30 93.3 30 ............................TG CTGAAAATCCAGCGCGGACTAGAAATGGCT 10682 30 96.7 30 .............................G CCATATCATTCATAGCTGTAGGCGAATAAA 10742 30 100.0 30 .............................. TGCCCTGCTTCGACAGATACATCAGCAACA 10802 30 100.0 30 .............................. TCAAAACCAACAACATTAAATCTTGAATTA 10862 30 93.3 30 ............................TG CACATAGCATTGGATAGTGTTGTTAGGTGC 10922 30 96.7 30 .............................A GAGGGAGTGACATAGTAACAATTGCTTGTT 10982 30 93.3 30 ............................TC AATATGCTAATCCACCTTCAGAATCTGCAC 11042 30 96.7 30 .............................A TATAAATCATCATTAATAGCCATATGTACG 11102 30 100.0 30 .............................. CATAGCAGCCCCTAAAAGCTCAGGCGTTAA 11162 30 96.7 30 ............................C. GGAAGAAGCTAAATGCTATTTTTCAGTAAC 11222 30 96.7 30 ............................C. TAAGTAATTTTGAGACGGCACTAGATAGAA 11282 30 93.3 30 ............................TA CGTGTTGCATTATCAAGTATGCAAGTTGGG 11342 30 100.0 30 .............................. ATGTAAATAAAGAAAGTCCAGCACCCTTAA 11402 30 96.7 30 .............................C CACCAGTCGGATTTCCCTGTGGGTCTTTAA 11462 30 93.3 31 ............................TA TGCAAATCAATTTAAATAAATTTTAAGTCAT 11523 30 93.3 30 ............................TA GAAGATTTCGGGCTTTTTCAATAACACCAG 11583 30 93.3 30 ............................GG TAGCCCATCTATTAAACTCAACCCGAAACA 11643 30 93.3 30 ............................CG CAAAACAGAATTTACTTTGACACTAAAGAT 11703 30 93.3 30 ............................TG ACAAGTTAGAAAATGAGAAGCCTTTAGAAG 11763 30 93.3 30 ............................CC TGCTCTAGCCTTCAGATCGCATAATGCCGA 11823 30 93.3 30 ............................TA TAAAAAAACGTGGCTGCGGTGCGTACGGTA 11883 30 96.7 30 ............................G. GATCAATATTCAAAAATTCAAGCTTATCAA 11943 30 96.7 30 .............................A CTAATCGGCAATCCTCTGTCAGCTTGATAA 12003 30 93.3 30 ............................TA AATACAATGGAACAGAGACTGTTAAGAATG 12063 30 100.0 30 .............................. TCATTGGTGGTGAGGATGAGGACCAATGGA 12123 30 93.3 31 ............................CA TTTTTACGCATAACAATATTACCTTTACGCT 12184 30 93.3 31 ............................TA TTTAAACCATTGCGTTAAAAACAATTCATAT 12245 30 93.3 30 ............................TG CTGTTGTGCTTGTTGCGGTTGGGATGCTTC 12305 30 96.7 30 .............................C TAATTCAACAGGTACGGCATACGTTAATCC 12365 30 93.3 30 ............................TG ATGATGTTTGTTGGATTGCAACTGATGAAG 12425 30 93.3 30 ............................TA GTGAAGAAGTATCAAACATTGTTCAAGTAA 12485 30 93.3 31 ............................TG TTAGAGCCACACAGCAAGCTACGCAGAATGT 12546 30 96.7 30 ............................T. CTTCATCTTTAAATTTTCGCATTGCTGTGC 12606 30 96.7 30 ............................T. TTAGATCGTATTCGTCGTGAAAAATTACCA 12666 30 96.7 30 ............................T. TCACAAATGAAGTTCGTGCAGTTGAAGAAC 12726 30 93.3 30 ............................TC ACCTGACCACTTGGCTGAATGGTGCTTTAT 12786 30 93.3 30 ............................TG ATCGGTTGCACCTGAAGGATATTTACCAAG 12846 30 100.0 30 .............................. CTGAAACTGAGCCTCAGTCTTAAATGGAAC 12906 30 93.3 30 ............................CA TGAAGATTACACCCACATGATCATTCATCC 12966 30 93.3 30 ............................CA AAAAATTAATAACTATTAACCCGCTTCCTC 13026 30 93.3 30 ............................TC GCAAAATTAGTGAGAACAAGACTGTTTATC 13086 30 96.7 30 ............................T. GGGGTGACATACCCGCTAGACCATTTTTAC 13146 30 93.3 30 ............................TA ACGTGGTCAAGCCGCCGAAGATTCCTGAGA 13206 30 93.3 30 ............................TC TTACCGTTCCATCTCTTCCAATTGAGAATA 13266 30 93.3 30 ............................GA ATAAACATGACCAGCATCATAGCCATCAAC 13326 30 93.3 30 ............................GG CTTTGCAAAACCTCTTTTACAACGAGCTTT 13386 30 93.3 30 ............................CA GACATTACAGCCGCCCCAGTTGCTTCCACC 13446 30 100.0 30 .............................. TAAGGGGCGATGCTTTATTGATCCAGCCAC 13506 30 96.7 30 .............................C CGAAATGGTACCAAGTCTGAAAACCGCATA 13566 30 96.7 30 .............................A TGACAACTGATCCACCGTTTTGCCAAGTTT 13626 30 93.3 30 ............................TG TCCCTGCTGCAATCATTTCAAGAATCTTTT 13686 30 93.3 30 ............................TC TGAGATGTACGCTAAACAATTCACGAATGC 13746 30 93.3 30 ............................TG AATTTTACAAACTAAAGCTGGACGGAAAAT 13806 30 100.0 30 .............................. CGATCTTAGCACCAAAATCGTAATATGTAG 13866 30 96.7 30 ............................T. GAGCTCTCTCACAACTAAGCGAATTTAAAT 13926 30 96.7 30 ............................T. CTGGAAAGCCTATTATGGATAGGATTATCG 13986 30 96.7 30 ............................T. GAGCACGTTCACAGCTAAGCGAATTTAAAT 14046 30 96.7 30 ............................T. GTGATTGGCGCGAATCTATTAACAAAGAAC 14106 30 93.3 30 ............................TC TTGAAGTCGAGTATAGTTTTTAATCTTATG 14166 30 93.3 30 ............................CA CCAAAATGGAGGGGAGACTACCCCCGAAAA 14226 30 100.0 30 .............................. AGAGTTTTCGAGAGTTCGATTAAGCACATA 14286 30 100.0 30 .............................. GTGAACGGCCAAGCATAATAATCAGGCCAT 14346 30 93.3 30 ............................TG TAAGTAATGGCGCACATCTTTTTTAGCTGA 14406 30 96.7 30 .............................A AGCCTGAATTGATTGAATCGACGATCTGAT 14466 30 96.7 30 .............................A CCATACCAAGCTGCAAACACAACCGCACAG 14526 30 96.7 30 .............................C ACCAGTTACAACGTAATTACCATCCAAGAA 14586 30 96.7 30 .............................C AAAAAGCTAAGTCTTTGGATGGGTGATGTT 14646 30 93.3 30 ............................CC GAAAATTTGTACCGCCGATGTTACACCAAT 14706 30 100.0 30 .............................. GAAGCTAAGAAATGGGAACACCTGCAAGAT 14766 30 96.7 30 .............................C GTAAAAGGACTTTACGGTTTGGGTCAGCTT 14826 30 93.3 30 ............................TC TGGATGTGGCCAAAGCAATTTATCGCAAAA 14886 30 96.7 30 .............................A CAACACCAATACCTCTGTTAAAATTTTCTT 14946 30 96.7 30 .............................C CAAACTTCTGTTTTAACTCTTCGCGTTGTT 15006 30 96.7 30 .............................A AACCATCCACAGGGTAACCATTAGCAATAC 15066 30 93.3 30 ............................CG ATATACGACAGGCTTCAAGGCGACCACTTC 15126 30 96.7 30 ............................T. CTGTTAGCTCTGCTGGATCATCAACGCCAT 15186 30 93.3 30 ............................GA ACTGAAACAGTAACCCTCAAATGTTTAAAT 15246 30 100.0 30 .............................. TTTCAGCGAATGGTGTTGTAATTAGTGTTG 15306 30 96.7 30 ............................T. TTGCAATCATGATCCGGACGATAAAAAAAT 15366 30 93.3 30 ............................GC TTAAAGTTTGGATGAAAGCGCATAAGGGCG 15426 30 100.0 30 .............................. GACGAACCTGTCTTACCTTCAGATCCTTCT 15486 30 100.0 30 .............................. ACACTCATCGCGATTCTATTAAAGTCTGTT 15546 30 96.7 30 ............................T. CTTTCCCGATGCTTCAAGTGTCTGGTGAGT 15606 30 96.7 30 .............................A AATGAGAAATTCATAACCATATACCCCGAG 15666 30 93.3 30 ............................TG AAGAGTTAATCAATATTATTTCTTGCTCTG 15726 30 93.3 30 ............................TA TGAGAAAGAAAAAAATTGCGACAAAGATAA 15786 30 93.3 30 ............................TA CTTGGGAAGAGCGTTGCGGGGCTATTTCTT 15846 30 96.7 30 .............................G CTAACTTACCACCGTTTGCAAATGTTTATA 15906 30 93.3 30 ............................TA AAGATACGTTTTTAGCTTTTAATGTGATTT 15966 30 93.3 30 ............................GC AAAACTTAAAAAAGCAATCCAGACGCATGC 16026 30 100.0 30 .............................. TAGCTAAACCTTCAATCTCGCCTTCAGCTA 16086 30 93.3 31 ............................CC CTGAAGACACTTCTTTGAAACGCAACGTCAC 16147 30 100.0 30 .............................. GTCCATTTTGCGGATACGCAGATGGGTTAG 16207 30 96.7 30 ............................T. CCCCCTTGAGCGCTTCAACCATCGCCTTAA 16267 30 96.7 31 .............................A ACTTAGATGACAAAGTATTAAAGCTCTGTGA 16328 30 93.3 30 ............................GG GTATAAGTGAAGTAAGTATCTTGAGGAATA 16388 30 96.7 30 .............................A TGGATGGATATGGCATAGGCAAAGACGGCA 16448 30 100.0 30 .............................. AGAGAATCGGTACTGGATAACCTTGAGCGG 16508 30 100.0 30 .............................. CCTGAGCGTCGTTGGAAGGCGGACTTCCGG 16568 30 96.7 30 .............................A ACTCTTGCAAGCTAGCAAGATAAGCAGGAT 16628 30 96.7 30 ............................T. GAGAATTATGAAAAAGCAGGCTTCTATGAA 16688 30 96.7 30 .............................A CAGACATACTTCTTTCATTTGCATCGCCAG 16748 30 93.3 30 ............................GA GGCGTAAAGATGCGGTGTTGATCTTGCACG 16808 30 93.3 30 ............................TA CGTAATAAGTACACGGTGCAATCGGTGCGT 16868 30 93.3 30 ........................A....G AGTTTTAAACCCGCGCTACACCTTTCTAAA 16928 30 93.3 31 ............................CC AAAAAAAATAGCCCTACGTTTAAGCATCGAC 16989 30 96.7 30 .............................A CGTGAACAATTGTTTTAGCTTTGAACATTA 17049 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 17109 30 86.7 30 A.....AA.........T............ TTTGATCTTTACTTATTCTCGCTTCAAACA 17169 30 70.0 0 .......A...T.....T..C...AGCGT. | ========== ====== ====== ====== ============================== =============================== ================== 113 30 95.3 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.19, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 9344-11112 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASGK01000008.1 Acinetobacter baumannii TG27391 TG27391_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 9344 29 96.6 31 ............................A GCAACAACTAAATCAGTGTAGCGATTATCTT 9404 29 96.6 31 ............................G TTGCATCCATGGCATTGAATTGTAGGATTGA 9464 29 100.0 31 ............................. TATGAATTAGCCTTTAGAAAGCAAGAGTTTG 9524 29 100.0 31 ............................. TAATAGTTCCAATAGTTTGACCAATTGGCGC 9584 29 96.6 31 ............................C AGCTATGAATGATATGGCTGGTGATCTTGCC 9644 29 96.6 31 ............................A GCCATATCATTCATAGCTGTAGGCGAATAAA 9704 29 96.6 31 ............................A TGCTTAAGGTTGAGACAAATAAAGAGTTTGA 9764 29 96.6 31 ............................A TCACATCTGCTGGCTTAGAAGAAAACAAAGA 9824 29 96.6 31 ............................A TCTAATTCATCTTCAACACGTTTATGGAAGT 9884 29 100.0 31 ............................. GTACTGTCAAATTGACGTCATAGCTTGTATA 9944 29 96.6 31 ............................C GGTGCTTAGATGGTGGTGGTAAAGTCAAGTC 10004 29 96.6 31 ............................C AAGAACTCAGCAGCTTGGGAGTCATTAAGCC 10064 29 96.6 31 ............................A GAGATAGGTGAGGCGATTCGTGTTTATCCGG 10124 29 96.6 31 ............................A AAAGGTAAATTATATAATCGCTTAGCGTAAT 10184 29 100.0 31 ............................. TCCCTAAACCGCGCTATGTTATTAAGTGCGG 10244 29 96.6 31 ............................G TTAAGTGTGTGGCTATAGGCTGTCACCTCAT 10304 29 96.6 31 ............................A ATATTTTCGCCTTCTAAAAACTCCACAACGC 10364 29 96.6 31 ............................C ACACTGAATTTGTGCCATCTTTTAAGTCATC 10424 29 100.0 31 ............................. GGTCAAATTTCGGCGAGATCCAGTATTGTTT 10484 29 100.0 31 ............................. CAATGATGAAGCTGCGTAGAGCGTACAACCT 10544 29 96.6 31 ............................C GAAAAGAATGGAAGTGGATTAAAGAATCGCC 10604 29 100.0 31 ............................. GAACAATCCGCTGTAAGCGCAAAGTAAGAGC 10664 29 96.6 31 ............................C TTCTCGGCTGATAATTGGCCCATCTGCTCGA 10724 29 100.0 31 ............................. GCATATTCAAGAGCCGAATCTGGTGCATGTT 10784 29 96.6 31 ............................A AGTGAATATTTTATCGCTGCTTATCCATGTT 10844 29 100.0 31 ............................. CAAAACCCACAGGCTTGCGGTATTTATGTAT 10904 29 96.6 31 ............................C ACAGGCTTGCGGTATTTATGTATTCGATAAA 10964 29 100.0 31 ............................. CAGCACGACCTTTCTCGTACAATCTCAGGTA 11024 29 100.0 31 ............................. TCTCGATTGTGCAGACTTATACAATCCAATT 11084 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =============================== ================== 30 29 98.0 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCACGACACTATTGCGGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCTTTACCTATTCTACACGGTAAAACACGTCGTGGAGGACTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTAATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTTGACCTAATGAGCGTGCTAATCACACAAGTTCTT # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.57, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //