Array 1 376543-377591 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP015622.1 Corynebacterium crudilactis strain JZ16 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    376543	    29	  89.7	    32	............TGG..............	TCACCACCTGCAAAATCGCCATTCCTGATCTT 	
    376604	    29	  86.2	    32	............TGG.............G	GCTGGTTTGGTAGGGGTTGTGAGTGGCCCTGT 	
    376665	    29	  86.2	    32	............TGG.............A	AGGACGGAGCTCTACCAACTGAGCTACACACG 	
    376726	    29	  89.7	    32	............TTG..............	CAGCATCGACGCTAAAACCTGGGATTCAGAGG 	
    376787	    29	  89.7	    32	............TGG..............	ACACCTTCAGGTTTCGACGCCAACCACCCCTG 	
    376848	    29	  96.6	    32	............................G	CGGCCGGTAGCTCCCACCGCGCAGTAGTCGCA 	
    376909	    29	  96.6	    33	............................G	ATACGCATCCTGCGGAGTGGGCGATGAATCAGC	
    376971	    29	  93.1	    32	........................A...G	CAAATCGTACTCAACCGCTAGACGAAAATCAT 	
    377032	    29	 100.0	    32	.............................	ACCCTGACCTGCAAGAATATTCCGCACACCCT 	
    377093	    29	  96.6	    31	............................G	TGTTTGGGTTGACACGCTTTTTGCAATGTTT  	
    377153	    29	 100.0	    32	.............................	TCACTGCGTGACGCGTCGAAAATCTTGCGAGC 	
    377214	    29	  96.6	    32	............................A	CATTATGGCTCCTACGGGTTCAGGGTGAATGA 	
    377275	    29	 100.0	    32	.............................	ACGGGATCAATGCCCATCAGAACGGCATACGG 	
    377336	    28	  93.1	    33	.....-......................G	ACGCGGGACTTGCGGGCGCTCCAGGAGCTGCTT	
    377397	    29	 100.0	    33	.............................	GACTGACTCAAATTCAGCAGTCTTGGTGGCAGT	
    377459	    29	 100.0	    33	.............................	AGATTGGGGCGAATATTGCGTTTATGCCAGCCC	
    377521	    28	  93.1	    15	.........................-..G	GAAAATCCGCGCCTA                  	Deletion [377564]
    377564	    28	  82.8	     0	.....-.T......T.........A..T.	|                                	
==========	======	======	======	=============================	=================================	==================
        18	    29	  93.9	    31	GTTTTCCCCGCACCCGCGGGGATGGTCCC	                                 	       

# Left flank :   GCAGATTTTCAAGGTGAGTTGCTTTGGCATCTTTAGCCGGCGGAGCTTCAGTTTCGCTCGAACTTGAACTGGAGACAAAACTTGATTGAGCTTGAGTGGCGCTAGCCGGGAATAGCAGAACACTTGTAACCGCTATGGCCAGGGATTTATATAAAAGTTTCTGCACAGGTAGAGGGTAGCTTACTGCAGTGACAGATGGGCGGTTTAGAAAGTCTATGAATTTTTCATATCTCTTTCATATTTATTCGACTGCTACTATTTGGATCTAACGAGGCGTTGAATTCAAACTAATTAATTAAGAAAACAAGTTTGAAAATAAAATCCGATAAAATACATAAATCAACTAATTTGCGAGTTTCCTTGTATATACAGGGATGGTTCTTAGTGAGTTTGAATTTTGTAAAATGGTTGAGATCCATGCAAGAGCAGGGAAGCTAAATGCGGAACATAAAGTGATTAAAAACCTTAGTCAGTGAATTGTTATGAGCTGGTAAATTAGT
# Right flank :  CAAATATGGTTGCTCCCATAGCAAGCACGCTCTTTGGCAAAATGTGGATCCTTATTTCGACAGTGACATGCTACTTAGGGAGCCAACCTAATTACATTGTGGTCTGAGACTTGTTCATGAATTAGGCCTCCGACGGGGAGGATTTGCTCAGCTTCAGAGCGGAAAAAATCCACTACGGCAAGAGTCGCTGGGCTTGGATCAATATTGTCAGGGATACACACTACTGTGAAGTTTTCTCGGCCGATATCTCTGATGGGAACTGAACTGAGTTTCTTGCCAGAGATGGTGTGAAAGTGTTGGTTATAGCTGTAGAGAAGTGAAATGCCTAGGCCACTTCCTACCAGTTCCTTGACTGTTTCAATACTGTCGGAGGTCCATCGAATTCGGTCTTTTAGGCCGTGCTCTTCGAGGATTGCGGTCATGTGCTGACGTGCTGGGCTGAGACCGAGTCGGATGAAATCTTCATTGTGTAGTTGATGGAAGCTGATGTCGGTTTCAGC

# Questionable array : NO	 Score: 5.29
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.07, 8:1, 9:0.41,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTCCCCGCACCCGCGGGGATGGTCCC
# Alternate repeat :   GTTTTCCCCGCATGGGCGGGGATGGTCC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [6-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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