Array 1 252584-252784 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNSJ01000002.1 Streptomyces sp. 2314.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================ ================== 252584 27 100.0 32 ........................... AACCCCTACGGCGGGGAAGCCGACAACGTGCG 252643 27 100.0 31 ........................... AACCCCTACGGCGGGGAAGCCGACAACGTGC 252701 27 96.3 30 ..T........................ CGCCACGCGGCGAGTCAGGCGACAACGTGG 252758 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== ================================ ================== 4 27 99.1 31 GGGGCGCCGCAAAGCGCAACGGCGAGA # Left flank : CGTTGATGCCGGTGTTGTCCGGAGCGTCGGGAGAATGCACGACACGGGCGCTGCTCATATGGCCTCCATCATCCGAGCCCGTTGCACGACTCTGGGCGATTTCGTACCGTACCCGGCACTTCCTACGTTTTCGGCTTTCCCGCCGTTGCGCTTTGCGGCGCGCCGCACGTTGTCGGCCGTCCCGCCGTGGGCGTTGTTCGCCGTTGCGCCTGGCGGCGGGCGTGGTTTGTCGGGTGCGGTGCCGCTCCTCCGGACTTCGTCCTGCGGCGCGGCCCCTCCCGTGAGTGGGTGGGAAGAGGCCGGTGGGGGCGGGCCCCGGCCCTCGTCTGCGCGCGGTCGACGGATGAGGCCCGCCCCCACCGGTCTTCTTCCACCCCCAACGGGAGGGGCCGGACCGCAGGACGGAGTCCGGAGGGCCGGTCCCGCAGCCGAACAGCCAGCGCAGCGGCAACCAGCCCGCCGCAGGCGAGCCCCTACGGCGGGGAAGCCGACAACGTGCG # Right flank : ACGCCACGCGGCGAGTCAGCCGACAACGTGGGAAGCCAAGCCAAGCGCTCAAGCGTTTAGCGAGGCGCGATGTCCGCAAACCCCTCGATCTCCCGCGGGCTGCGCGCCCCGGGCCCCACATACCGGGCCGACGGCCGAACCAGTCGGCCCGTCCGCTTCTGCTCCAGGATGTGCGCGCTCCAGCCCGCCGTTCGGGCACAGGTGAACATCGAGGTGAACATGTGCGCCGGGACCTCGGCGAAGTCGAGGACGATGGCCGCCCAGAACTCGACGTTGGTGGCCAGCACCCGGTCCGGGCGGCGGTTGTGCAGCTCCTCCAGGGCGGCCTTCTCCAGCGCCTCGGCGACCTCGAAGCGCGGGGCGGCCAGCTCCTTCGCGGTGCGCCGCAGCACCCGCGCCCGCGGGTCCTCGGCGCGGTAGACGCGGTGGCCGAAGCCCATCAGCCGCTCGCCCTGGTCCAGCGCCTTACGGACGTAGGCGGAGGCGTCGCCGGTCCGCTC # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGGCGCCGCAAAGCGCAACGGCGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,0] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 1243456-1244591 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNSJ01000001.1 Streptomyces sp. 2314.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 1243456 29 82.8 32 A..G.......G.AT.............. GAGGCCAGAAAGCCTGTGGTCATGGAGCTGGA 1243517 29 82.8 32 A..G.......G.AT.............. TCCCGGCCGTCCAGGTCGGCGTGGTCAGCGAG 1243578 29 82.8 32 A..G.......G.AT.............. TCGTAGACGGGCGGGGCCGCGGAGCCGAACAA 1243639 29 86.2 33 G..G..A....G................. TGAGGCGTTCCGGGCGTAGTCCGGTTGGGGTGG 1243701 29 79.3 32 TG.G.......G.AT.............. GAACCCGTCCCCTGGTGCCTGGACTATGCCCT 1243762 29 82.8 32 G..A.......G.AT.............. GGGGGCTTGATCAGGTTCTTCCAAACCCAGCC 1243823 29 79.3 32 G..G.......G.AT......C....... TACGTCCACGGCCTCATCGATCTGACCGGCCA 1243884 29 79.3 32 G..G..T....G.AT.............. ATGTCTCCAACCTCCGTTGATGTGTTGTCATT 1243945 29 100.0 32 ............................. GGGACGTACCGGTCCTTGAGGGCCTGTGTGAG 1244006 29 100.0 32 ............................. AGACACCAGCCGTTTCCCCGGAGGCCGCAGCG 1244067 28 75.9 32 G..G.-.....G.AT......C....... GATCTCGCCCTGCTGGACGGACTCCGGGACAT 1244127 29 72.4 40 GC.G.......G.AT..A...C....... GGTGGATCCGCCGCTCGAGTCTCTGCTCGGAGCGACACGC 1244196 29 72.4 32 G..G.........AT.T...A...A.A.. GTCTGGTTGGGCTTGGCCGGCGTGGATGCGGG 1244257 29 96.6 32 .................A........... CGGCTGGCCGCCCGGTCCGGACACGGCGACCG 1244318 29 100.0 32 ............................. ACCACCGCCGAGCGCAGCCGCCGCCTGCCACC 1244379 29 96.6 33 ...T......................... CAGGCAGCCCGCGGAGCAATCGCGGGCGGCGTC 1244441 29 93.1 32 G..G......................... ATCGCAGGCGCCCACACCGCCTTCGTCGGACT 1244502 29 100.0 32 ............................. TGGTCCATGATGTCGCCAAGGTACTTGGCGCT 1244563 29 96.6 0 ...T......................... | ========== ====== ====== ====== ============================= ======================================== ================== 19 29 87.3 33 CTGCTCCCCGCACCCGCGGGGTTGGTCCC # Left flank : ACATCATCGAGTGCTGAGGATGTGGGCCCTGACCAGCGTGTTCGCCTCTTTCAGCGCTGTCAGGGACTTCCCTGCTTACCCAGCGGAAAGTCCCCGAAAAGTCCCCGGGATGTCCCCGGCCGGCGAGGGCCTCAAGGGAAGCCATCCGCTTATTGCGGTAGGCGGAACAGCTCCCCGGCAGCACCTCCATCAGCCCGGCTGCAGAGGGCCCACCGTCAGCGGGCGGCCAAGCAGAATCGGGCATCGCGCCCCCCATGGCGCCAGCTCCATCCCGGCAAGAGCCGTCGTGAAGGATCGAGAGAGAGCCCAGTATTAGCCTGGGGACACCGACATCACATGTACCAGCGGTCCGGCGCCGGAGCGGTACCCCAGGCCACAATGGCTCCGCGGACCACTGCCGCCCCGCCGGACCCGCAACCCACTCGAAGGCCATTATGTCCGAATCGCTGAAACTAAGTAAAAACAACTCATCGTCTTCCTGAAACCGCAGCTCACGACCT # Right flank : CCGGGCGGCGATCGTGCCGAGGGTGTCGCCGTATTGCCCTGAGCGATCTTCTTGTCGTAGTACGACCTGGACGCGGGGTCGGCCAGGGCCGCGAACGCCGAGAGGAAGAAAGCCCGTTTGAGCTGCTTGTTTCCCCGCCGGGATGGTTGCTCGTCGTGGATCGACGAGCCCGAGCTGCGGGTCACCCGGGCGAGGCCGACATAGGCGGCGAGGTGGGCGGCGGACGGGAAACTGCTGCCGTCGCCGACGCCGATGAGGTTCCTGGCTCCGGTCCTGACGCCGATGCCGGGCATGGACGTCAGGACCTTGGAAAGAGGTTGGGCCTCCAGCAGTTTCTCGATCCTGACGGCGAGGAGTTTGCGCTGGTCAAGGACCGCCTGGAGCGAGTTGGTGAGGCTGGGGACGATCAATGCGGCCGCATCCGTGCCGGGCACGATCACGGTCTGCTCGTCCAGGGCGGTGAAGGTGTCTTCGACTAGCCGCTCGGCCATCCGCGGTGC # Questionable array : NO Score: 4.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.36, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGTTGGTCCC # Alternate repeat : TCCCCGCGCATGCGGGGTTGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.50,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1248309-1248824 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNSJ01000001.1 Streptomyces sp. 2314.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1248309 29 100.0 32 ............................. CAGGGGCAATGAATGATCCGGCCGATGGCATC 1248370 29 82.8 32 G..G.......G.AT.............. GCGTGGATCGCGGCAGTAACAGCGGGCCCGGC 1248431 29 96.6 32 .................A........... ATCTGCCGCGCGATGAGGTCGCGGTCGATGCC 1248492 29 100.0 32 ............................. AGCCGTAAGGCGGGGTTGAGCCTCAACGTGGT 1248553 29 96.6 32 ...........G................. AAGTACCAGCTCACCGAGGCGCAGCGTTCTCC 1248614 29 96.6 32 .......................A..... CTCTCGATGCGGCCCAGGCCGACGTTGAGCTG 1248675 29 82.8 32 ...........G.AT........A.C... CGGGCCGAGCACAGCTACTACACCGACCCCCG 1248736 29 79.3 32 G..GA......T.AT.............. TCCTCTTCGCTCTTGACCTCAAGGATGGCGAA 1248797 28 79.3 0 G..G.......G.AT..-........... | ========== ====== ====== ====== ============================= ================================ ================== 9 29 90.4 32 CTGCTCCCCGCACCCGCGGGGTTGGTCCC # Left flank : GGCACCCACGACACCTGGGTTCGGCCCCAGGTTCAGCTCGGGAACCATTACATGGCCGACTTCATGATCGCCGGTGAGACTTCCCTAGGGCTTCGCTGGACGCTGGTCGAACTGGAGAGCCCGGTCAGCCGCCTGACCAACCCCGGCAACAAGCGGGCGACAAAAACCCTGCGCCACGCGGTCGACCAGATCGAGGACTGGCGCAAGTGGCTTTCCAACAACCTGCACTACGCCCGCTCCGCGCGCGGTGCCGACGGACTGGGCCTGCCGGGCATCACGGCCGAGGTTCCCGGCTTGATCATCATGGCTCGCGAGGACGCCGACGACGCGGCTGCCGACATCCGGGAACTCCATGCCCGGCGCTCACATATCCAGGTACGCACCTACGACTGGCTGATGCGTATTAACGAGTCACCCGACCCCCTACGTCGAGACGCCCCCGACCAGCGCCTTCGACTCGCTTGAAATCAGCCGCACATCCACCCCTTCTACGCCATGAG # Right flank : CTGGAGGGCGTCCTGCGCGACACCCCGTCCGCAGCCCGTGGCTGCGCGAGGTCCTCGACAACCTCACGCAGCACATGCGCACCGGCCTCTTCTAGCCAGTCGGCAGAACGTGCCGACGCCCAGTCCCCGCCCATTCGGTAACCGTGCTAACGCGAGCGAGCCGTGTCGGATAGTGGTGCCTCCCGAGCAGCCCTGAACAAACCTCGCGGACTGCGGCTTTCCGGTCCGGTACACACCGACAGTCCGAACATAAGAGCGGCATCCGGCATCCCATGTCCCTTAAACTGACGGTAAGTGGGTAATGCGAGACGACGAGGAGCACTGTGCGAACAGGTCGAGTCGACGCCTCAGGGACGAACCCAGTGCCGCACCACCGCGAAGCTACCGACCGTGAGCCCGTACCTCAGGGGCTGGCCAGGTCCGCGCTCATCGCGGCGTTGCACGACTCTTACGACGTCACGCTCCGCGCCCCTGCAATAGCCGCGCCCGTGGCGCACCCG # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.52, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1263330-1264093 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNSJ01000001.1 Streptomyces sp. 2314.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1263330 29 72.4 32 .C.G.......G.AT..A...G..C.... GTTGAGCAGGAGGAATATGGCTTTTGGATTCA AT [1263343] 1263393 29 93.1 32 ...G.......G................. CTGATCCTGCGAGGGCCCGCTGCCCCGAGGTC G [1263410] 1263455 29 96.6 32 ........T.................... CCGGAGACCGACGAACGCTGGTGGTCGTCCCG 1263516 29 96.6 32 .....................G....... AGCGAGGGTGCACCGGCCATCCGCCGAGTGCG 1263577 29 96.6 32 .....T....................... AAGTTCACCTGGTTCAAGAATTTGGTGGACGG 1263638 29 100.0 32 ............................. TGCCTACCGGCTGCCAACCCTCGGTGTGGCGG 1263699 29 100.0 32 ............................. AGCCTGGCTGCCGTCAGCCGTCTCGCCGTTCG 1263760 29 100.0 32 ............................. CGTGCCAGCCGCCGTGCCGCGGCCCGAGCCAA 1263821 29 100.0 32 ............................. GGCCCCGGGTCCTTCGAGATCAGGGAGATTCC 1263882 29 100.0 32 ............................. CACGTCGACAACCGGCTCCAGCTCCTCAAGCT 1263943 29 100.0 32 ............................. CAGCACCAGGGGGCGTGACCGTGGCTCCATCG 1264004 29 96.6 32 .............G............... ATCGGCGTCCTCGACCCCCGCCCAGAGATCGA 1264065 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 13 29 96.0 32 CTGCTCCCCGCACCCGCGGGGTTGGTCCC # Left flank : ACGATGCTCGTCAAGGTATGCATTGAGCTTGTCGCACTGCTCAGGAGAGAAGGCGCCGGCCTTGAACATCGCAACCCACTCAGCGGCATCCCCCGGCCGTCCCAGAGCATCCACGATGATGGGCAGCAGCAACTGCCGGAAAATTGCAGGCTTCTGGGTCGGCAGCTCGACGGCGATGTCCTGGAACCGCTCGGCCCCCAGAAGGAGCCGTCGTACACCAACCTCTTCGAAGGCACCAAGCCCTCGGTGCCCCTCCCCCACAACACTGTTCGAGGAGCGTGCGGACAGCCACGCGTCGTCCAGCAAATTACACAACTAGGCTTCCCCCCATGCATCTACGCCATAAGACGCGAGAGGCATCGTTACACAGCAGCCCCCGGTCCCGTCTCCGAATGCCAAAATGCACACGAGCCCTGCTGGTCACTCGCGTTCTGGCGGCTCTGGGATCGTTCCAGTTCTATTGGTCCCTAGCTCTCCTCCCGGCTGGGCCCACCGATGTT # Right flank : TAGGTCTTGTATCGAAAGTGGATCTTGGGCTGTGAATGATCACGGTTCATGGGGCGGGGAGATCTCACGGACGAGCAGTGGGCGGTGCTGGAGCCGCTGTTGCCGAAGGGGGTGAAGGCGGGTCGGCCGCCCGCCTGGCCTCGGCGGCAGTTGATCGACGGCATACGGTTCCGGGTCCGGACCGGAGTTCCGTGGCGGGACGTGCCCGTCGAGTACGGGCCGTGGAACCGGGTCTACGATCTGTTCCGCCGCTGGCAGCGGAACGGAACCTGGCAGCGGATCCTCACCCTGCTCCAGTCCCTGGCCGACGCGAAGGGTGCGATTGTCTGGGACCTGAGCGTCGACTCCACGGTCTGCCGCGCCCACCAGCACGCGGCCGGGGCCCGCAAGCAGGGCTACCTGCAGAAGGAACCACCGGGCGGCATCTTCATCGAGCCCCATGATCATGGGCTGGGACGGTCACGCGGCGGGTTCACCACCAAGCTGCACCTGGCCGTCGA # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.15 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 4 1265564-1265776 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNSJ01000001.1 Streptomyces sp. 2314.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1265564 29 100.0 33 ............................. CCACGCCTACGTCCGGGGCTGGCACACCGACCG 1265626 29 86.2 31 .....................A.G.TC.. GTAGTTGGTGTCGCCGCCGTCGCGCCGATCT 1265686 29 93.1 33 ....A....................C... CCGGCCGCAGAGGGGGCCCAGCCGTACCCGCAG 1265748 29 58.6 0 .........A.G.....C.C.AGCATCGT | ========== ====== ====== ====== ============================= ================================= ================== 4 29 84.5 33 CTGCTCCCCGCACCCGCGGGGGTTGGTCC # Left flank : GCGCAAGCAGAAGAAGCTCTCCCACCACCTCTTCGAAGCAGTGCTGGCAGGCGACGCCATGCGCACGAAGGCTCTGTTGCGCAGTGGAGCAAGTCCGGAGAGACGGAACAGTGACGGCACTACTCCGCTGTACCTGGCTGCAGTGCAGGGTGAGGCCGAGATAGCTCGTTTGCTCATGGAAGCCGGCGCCTCTCCCGACAACGAAAGCAGCGGCCTCGGCTCAGAGGGCACACCGCTGTGCGCAGCCGCCTGCTGGGGGCACACAGAAACGATCCGGCAGTTGTTGGCACATGGTGCCGATCCCAACCTTCGCGAAGACCACGGCACAGGCAAATCCCCGCTGTACTGGGCGAACAATGGACCTCACCCCGACACTGCCGAGATCCTCCGGGCAGCAGGGGCGCAACCAACAGCTCACCCAGCTTCGTAGCCAGTGCTACCTCAGCGCTCACTTTCGTAACAGGCCCTAACGCTCGGGTCTCAGTCGCCATCGCTGCGGT # Right flank : TCGCCGCCTCCACTGACGACATCATGGCCACAAACGCCACCGAGATCCCGCCCTGCACCCCCTGGCCGGACTCCACATCGCAGGAATCTTCCTCTGGTCAGCCCGATAATCCAAACGAAACTTGCCAGCTTCTCCCACACCTACACGTACTGTCCTCTCTCCCCGGGACGGGCTCCCCGGCCCTCCGTCCCACTGCCCGGAATCGGGCTCACGGAGCACGCTTCGACGCTCGTGTCGACCGAACGATCGGGACATGCAGGTGAATTGTCATGGAATTGCCAAGTTGCCGCAGAATCGTGGCGGCTACCGACAACGCCCGGGAGTTCTCGCATGTCCCATGTGACGGAGACAAATCCGCTCGCCCCTTACGTCCGCGGCGACCTGCCCGGCCGCTTCAACGAACTCGACGTGCTCAGGCGGCACTGGGCACGGTTCGCCGCCGTGTCCCAGGGCGCGGTGGTTCCCCCCTATGAGGTCTTGGTTCATCCCTCGAGCGGATG # Questionable array : NO Score: 3.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.23, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGGTTGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //