Array 1 4518-4785 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANK010000024.1 Vibrio metschnikovii strain M5C.2 Scaffold24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4518 28 100.0 32 ............................ ATCCACTCAGCGAGTAAGTAGACCGCCTGCAA 4578 28 100.0 32 ............................ ACGTATGACCAAGCCTTTGCGGTCATTTAACC 4638 28 100.0 32 ............................ AACGAATATCATTAGGTAAATAACCGAGCGCT 4698 28 100.0 32 ............................ GTCAAAGCTTGCATTGACTACGTTTTCAAACG 4758 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 99.3 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ATCTGGGGTATGTTGGGGCACTCTGTATTAGCAAGCATACTTTTAGCTTATAGTCTGTTTTTAAATGTTTTTGTGTGGTGGTTTGCTTTATGTTCAGAAAGTGACAATTACAAACCTGCATACTTGGTTTACATTGAGTCAAAGCCCGTTTTGAAACTATTCTTTACACTGGTTTCGTTATTAGTACTGGCTTTATTAGTTGTCGGTGTAAAACCTCATGCTTAAATGAGCCATAACAAACGCTTTAAGAGGGACAGCCAACGCTCGGCATTTTTACTATGCGTTGATTTCGGTGGTTTCCGTGCTATGCGGAAGCTTGGTGGTAGCGTTGTCTGCCCCTTAAGCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATT # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTAGGCTTTACACAGATTATAAGGAAGTAATGGGTATGAGCGTATCGAATATGTACGATCAAATTGCTGTAAGGTATGAAGATTTAGTTTTAGATTCACAATACATCGGTCCTGTTTGGATAGAAAAGAAGCTACAGTCTTTGACATTACCATTTCGGAAGTACTTAGATTTAGGGTGTGCGACTGGCACTATTGGGACTATTATTTCTGAGCTAATTCCAAATTCAAATATTGTTGGAATTGACGTGTCACCTGAAATGATACGTATTGCCGAGAGTCGAAATATTTACCAAAGTCTACATGTTCATAACCTTGATGAACCTTTAGGCCATCTTATTTCTAATGATAT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 932-484 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANK010000040.1 Vibrio metschnikovii strain M5C.2 Scaffold40, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 931 28 100.0 32 ............................ AGTAACCAGCGTAAACGGTTCGCTCTGATAAT 871 28 100.0 32 ............................ ACAGACTGCAGCGCCGCTAGAGGTGAATTCAT 811 28 100.0 32 ............................ GTACAGAATAAATAACTGGTTTGATTTATATA 751 28 100.0 32 ............................ GGACTTCTTAACATTCCGGTTCCATGCGCCAA 691 28 100.0 32 ............................ TCGATGCCCGGGTAGTGCTTATCGATTTGCTC 631 28 100.0 32 ............................ TGAAATCATTGAAGGTGAAGAGAAAGACAAAT 571 28 100.0 32 ............................ GCTAAATCCCATTATTGTTTTCATAATGTTGA 511 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.1 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TTTCAGGATCTTTATGGAAATAAGTGGGATTTGTTGCAATTAAGCAGCGATCATCGTTAGTACGCACATAACAAACGGTTCAAGAGGGACAACCAACGCGTGGCATTTTTATTATGCGTTGGTTTTTGTGGTTACAGTGTTATGCGGAAGCTTGGTAGTGGCGTTGGTTGCCCCTTAACCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTATATTGATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCAT # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTCATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCTGGGTATTTTAAATATTTCACAATGAACAAGCATAAACGAGATTGCATTTTAATGTCTTTTAATTCAATTGGTTATGGTTGATTTGTTTGTTCTTGGTTGTTCATCTCTGCACGTTGATATACAATATTTTTGCTACATATTGGCTACACAGCAGGATGCAACTCATGGCTATCAAGCAAAAAATCACCGCGACCTCTATCAAGAATCTTACCGTTGAACAGGAGCGGCTGAACGATACGGAAATCAGCGGCTTTCATGCCCGTATCTCACCTAAAGGTGCTATCAAATACTATTTCTACTATCGACTGAATGGTAAGCAGCGAAATTACCTGATTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 702123-702690 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANK010000001.1 Vibrio metschnikovii strain M5C.2 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 702123 28 100.0 32 ............................ GTTGAAGATGCTCACAGGTTTGTTGATGAGCT 702183 28 100.0 32 ............................ CGCCGTTGTAATCCGGCAAGTTTTCCCACGAC 702243 28 100.0 32 ............................ ACACATCCTTTTTGCACTCAGGGCAGGCGATA 702303 28 100.0 32 ............................ GGATGCGGCCACGGCCCCAATCGCGCGGACCG 702363 28 100.0 32 ............................ GACCTGACGAAGCAGTACAAAGCTGGATGATT 702423 28 100.0 32 ............................ ATCACCAAGCAAACCCGCCACTCTTTCCAATA 702483 28 100.0 32 ............................ CCGTTCCGTTTGTATTCCCTTACGTTCTATAG 702543 28 100.0 32 ............................ AGTACGACAGAGAGCTGAAAATTTTTTCGTTC 702603 28 100.0 32 ............................ GACCATGATTTTTTCGGGATGGATGAAGCAAC 702663 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 10 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GGATGTGACTTACGTAAGCTTTGTGCGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCGGCATTATGGGCAGAAAAATCTGCTAAACCGCTGGAGGAATGCTTGGCCGCTTTGCAACAAAGCAAGCCGACAGCATTGTGCCGTTTGCCGTTTATTTACCTACATAGTCAGCAAACTAAGCAGCGATCACCCGACAAAAACAGCAAGTTCCCGTTGTTTATTGAAATGCAGCAACAAAGCGCTTTACAAGATGGTCATTTCGATTGTTATGGACTGAGTACTAAAGGGAATGGGCTTCCTACGTTAGCCACCGTACCGCATTTCTAAAATGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGTTTTAAATACAATGGGTTACAATGGACGGTTTTTGATAAGGTAAAAATGCGATTTTTATCCTAACCAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : ACGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATGATCACCGTTTACTGATACTGCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGTTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGGGAAATGAAGGCGTAGCGATCATCGAAAACTGATCCACTAAATACACTTAGTCAGCATAGATTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTGTTCACCTTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2633-2125 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANK010000018.1 Vibrio metschnikovii strain M5C.2 Scaffold18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2632 28 100.0 32 ............................ ACCACATAGGCGACTGACTGATCACAGTTTTG 2572 28 100.0 32 ............................ TGACAGGTCAAGATTTAGTTGATCTCATGGAG 2512 28 100.0 32 ............................ CTAGATTGCTTGCGGCTTTCACCATGATAGTT 2452 28 100.0 32 ............................ TTGCAAGCCAGCCTTTGCCTTCCGAGGGTATC 2392 28 100.0 32 ............................ AGCTTCAAAACGCGCAAGATTGCGAGCAAAAT 2332 28 100.0 32 ............................ AAGCGCCGATAAACGAACCCGCTAAAAAAGTT 2272 28 100.0 32 ............................ AGCATCGTGCCATTAACGATATAAGGCTGTTG 2212 28 100.0 32 ............................ CCGAAATAAAAAAGCATTTCGAAGCGTCTTTT 2152 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 9 28 99.2 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AGATTCTGAAGCAACTCTCAGAGGTACTCAGGCTAGAGAAATGCTTAAAAAGCGATCTGGTGAAACTAACAATTTTTGTTCGTGACATGTCAACGTTAGGCAGTATCCGAGAGTTACTTTTTAATTTCTATGACGGCAATTTACCAGCATGCTCACTGGTAGAAGTATCCAAGCTAATTCATGCGGACCTGCAGATAGAAATTGAGGCCGTCGTAGCGCTGTAAGTACGAACATAACAAAGCATTTAAGAGGGACAGCCAACGCGCGGCACTTTTATTATGCGTTGATTTTTGTGATTACGGTGTTATGCGGTAAGTTGGTAGTAGCGTTGTCTGCCCCTTAATGCGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTATATGACTAAAGGAGTCCAGTTTTGATTAGATGGGATCATATTGCAGATCATGTTGATTTCAATCTTGAAATTTCTGTGGAAGACTTTTTAATATCGATTTCCCGAAATGGTAAAGTTTTAGATTTTGGTTGTGGTTACGGACGTATTTCAAATCAGCTTCAGAAGTTGGGTTATAAGGATTTAGTTGGTGTAGATTCATCAAAAGAAATGATTAATCGAGGTCTAACCGATTATCCTGAACTTGATTTACGTTATCAACAAGATGGTTTATTTTCTTTTTCAGACAATTATTTTGATGCGATAGTGGTATGTGCAGTATTGACTTGTATACCTGTTCAGGATTCTCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //