Array 1 46832-53465 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKNR01000013.1 Leuconostoc lactis strain BIOML-A1 scaffold13_size62794, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 46832 36 100.0 30 .................................... GACACAGTCGTCCATACCACAGGTGATGAA 46898 36 100.0 30 .................................... TCACAACAGAGTATTCCAGTGCTAATGAAT 46964 36 100.0 30 .................................... TTTAAACCAAACTTCTAAAACAGACTTCCA 47030 36 100.0 30 .................................... GCAGGATCAGATTAGAATTGAGACAATGAC 47096 36 100.0 30 .................................... ATTGGCTTCCACCCATGTTCAGATTAATCT 47162 36 100.0 30 .................................... TAATGATCAATGGTATGGACGTTGTTTATA 47228 36 100.0 30 .................................... TTTCTATATATGAAGGTTGTCCGTATCTAT 47294 36 100.0 30 .................................... TCAAGAATGAATTTATCGACACCATTACTA 47360 36 100.0 30 .................................... GAAAACCTGTTTTAACAGGCTCTAATCTAA 47426 36 100.0 30 .................................... TAGATCTTCTCGTGATAAAAGTTTTGGTAA 47492 36 100.0 30 .................................... CAGTTACGACAAGAAGATGAACGGCTTAAA 47558 36 100.0 30 .................................... TTGCGTGCCTTGTCGTATGCACGATCCTTA 47624 36 100.0 30 .................................... GCGGATGATTAATTGACATGAGTGTTTGAT 47690 36 100.0 30 .................................... CGTTAGTGTTTTGGTTCTGACGCTGCCACC 47756 36 100.0 30 .................................... TCTTGTTCTGCTCGCATCAATGCCCAATAT 47822 36 100.0 30 .................................... CAGCATGCCAAGCTACATAATTCTCACCAA 47888 36 100.0 30 .................................... CTGGTATTCAGTCACTGATTATCATGAGTA 47954 36 100.0 30 .................................... CTAGTGAAATTAATGTATCTGCTGACGGTA 48020 36 100.0 30 .................................... TTCGTGCGATCGCCGCTGTTTCCTTTTCTT 48086 36 100.0 30 .................................... CTGACCGGTGTTGCTGCGGCAATTGGCCCA 48152 36 100.0 30 .................................... TCACAATGAAATGTTTACCGTCTATTTTTA 48218 36 100.0 30 .................................... TTGCGGCTTCATTGAAATCTGTAAACGGAG 48284 36 100.0 30 .................................... AAATGACAATGATGTTATCAGTCAAGCGTT 48350 36 100.0 31 .................................... ACGTTCCTTACTGGTAAACAAATCTTTATAA 48417 36 100.0 30 .................................... ATGTTGCTAAGCGTTCAGACAGTCGGACAG 48483 36 100.0 30 .................................... ACATTGATGGATATATATCACTCATGTTAA 48549 36 100.0 30 .................................... TAAATTCAATAATCGAGTATAGATAGATAA 48615 36 100.0 30 .................................... CCAGCAGCAATAAAACATATTTAGGATTAA 48681 36 100.0 30 .................................... GTGATGCAATGGCTAATGGGCAAATCACAG 48747 36 100.0 30 .................................... TGGTGTATCTGATGAAATTATCAACGGAAA 48813 36 100.0 30 .................................... TCTGGCGAAATAAACTATGCAAACCCAAAC 48879 36 100.0 30 .................................... AACACACATGACAGGTGGCGGAATGGTTAG 48945 36 100.0 30 .................................... CAAAGTAGTTTTTGACCGCTTCAACTGTCG 49011 36 100.0 30 .................................... TTAATTGGTGTCCCAATTGCTGTTAGTCCA 49077 36 100.0 30 .................................... AGCTTATAAAGTGAATAACTGATACTCATG 49143 36 100.0 30 .................................... CGTGGTTTACTGAACGAACCAATGGCACGT 49209 36 100.0 30 .................................... CTGATATGAACGATTTAGCATTCAATTCAG 49275 36 100.0 30 .................................... TTCGTCAATTGTTCGCGTAAAGGCTATTGC 49341 36 100.0 30 .................................... AAACAGAAATGTTTAGTTGGGTTATGGCTA 49407 36 100.0 30 .................................... TACTTGTCTAATTCATCTTGCAGACCCTGT 49473 36 100.0 30 .................................... CCAGTATTAGATGCCAGACCATTTACAAAG 49539 36 100.0 31 .................................... TACGCTTGGATCGTAACTGGTATCACATCAC 49606 36 100.0 30 .................................... TAAATAAAGATTTACATAAACACTTATCAT 49672 36 100.0 30 .................................... CTAATTGATCAATAACAGACCACCAATGAC 49738 36 100.0 30 .................................... ACGGATCTAAACACGTAAACAACAAGCAAG 49804 36 100.0 30 .................................... TCAGCAGATCCTCAAGAATTATATGTTTTA 49870 36 100.0 30 .................................... ATAGTCTACCAACTTTACTGTTTCTGGGTG 49936 36 100.0 30 .................................... AATACGTGGTACTTATCTCTAATATCCTTG 50002 36 100.0 30 .................................... TGCGCAAGTATCACTTGCAAATGGCAGTCT 50068 36 100.0 30 .................................... TTTCAGAGACCGCATTTGGTGTCATGGTTT 50134 36 100.0 30 .................................... CTGGTCGTCCAACGCAATACTCTTCATCAA 50200 36 100.0 30 .................................... TCATCGTGATACCTCGCTTCAAGTTCTCTC 50266 36 100.0 30 .................................... ATGACAATGTGACAGAGCAAGCCTTGCTGA 50332 36 100.0 30 .................................... GAGAATGCTCTTAGTGACGTCAAAGGTAGC 50398 36 97.2 30 ..........................A......... TGTTGTTGCATGACAGTCAGCCAGTTATTG 50464 36 100.0 30 .................................... CTTCACGCTTGGCGTTTTAACCGCCTTAGT 50530 36 100.0 30 .................................... CTCCTGTTTATTCTGCTATGGCATCTGCTT 50596 36 100.0 30 .................................... AAAAGTTGGCGGCGGCACGTGAAAAAGACT 50662 36 100.0 30 .................................... ATTGGTTGCAAAGCGAATTGAGTTTTTACG 50728 36 100.0 31 .................................... TCAATACTAGACCAATACGCAACGAGAATGA 50795 36 100.0 30 .................................... CAAAGCGCATCACTATTCAGAACAATAAGG 50861 36 100.0 30 .................................... TCAACTCGAAAGCCTTGCGAGCCGCCAAAA 50927 36 100.0 30 .................................... CCAGGTTGCTATCTACCTGAAGAGTTTCGT 50993 36 100.0 30 .................................... AAATTGAATAGTTGGCGGTCGAATCAACTT 51059 36 100.0 30 .................................... GATCCGTCAGATCAACGCCGGCAACTTTTA 51125 36 100.0 30 .................................... CAAACCACCACAACGCGACGCCACTCAAAG 51191 36 100.0 30 .................................... TCGTGTTCAATGAGTATGATATAATATTCA 51257 36 100.0 30 .................................... AGCCACCCGCCTGATATTGTTCAAGCAAGG 51323 36 100.0 30 .................................... GTGCGTTGTGTGTGCCGCTTTATAGTGTGA 51389 36 100.0 30 .................................... ACTTTTTTTAAAATTATTTTTTTAAGTTGA 51455 36 100.0 30 .................................... AAATAAGTACGATGAGCGACACCAGCCAAG 51521 36 100.0 30 .................................... ACAAAATACGCAAATCGCGCAACTGTTGAA 51587 36 100.0 30 .................................... ACTTGCGACATGTATTTATTAAGACTTTGC 51653 36 100.0 30 .................................... AAAACGGCGCGCGTTTTAAGCGGTCTATCG 51719 36 100.0 30 .................................... TTGCATGTGATCGCGTCGCTTGTCTTTGCT 51785 36 100.0 30 .................................... TCGCTTTCATCGCTTGACTCGCAGCGTTAG 51851 36 100.0 30 .................................... CTTACTCAAAAAGATCGCGACGCGATCCAG 51917 36 100.0 30 .................................... GAAAAACTTGGTATTTACATTTTGCCGGTA 51983 36 100.0 30 .................................... TATCAGCGGCGCGCGTGTTTGGGATTGCGG 52049 36 100.0 30 .................................... AAATAAAATAAATAAACCTTTATCCATATC 52115 36 100.0 30 .................................... AACGTCGCACCTCTAATATTCAAAACGTCA 52181 36 100.0 30 .................................... CTCAAACCCAAAAGCGCCACCACCCTCCAA 52247 36 100.0 30 .................................... GTTGGGCTTGAAGCAAATTTTGCTCAATGC 52313 36 100.0 30 .................................... ACAAGCCACCGCCACCACGCCAAAGACAAG 52379 36 100.0 30 .................................... AGCCACAAGCCCGACAAACCACGCGACAAG 52445 36 100.0 30 .................................... AAAATGAATTTATGTTCACACTAACATATG 52511 36 100.0 30 .................................... CGCAAAAATGGAACGGTGTCAAATTATAAG 52577 36 100.0 31 .................................... TTGTCGCTGGTGGCGTCGGGCTGGTGGCGGG 52644 36 100.0 30 .................................... GTAAAGGGGTAGCGGTCTGTTAGAAGCAGA 52710 36 100.0 31 .................................... TTGTCGCTGGTGGCGTCGGGCTGGTGGCGGG 52777 36 100.0 30 .................................... GTAAAGGGGTAGCGGTCTGTTAGAAGCAGA 52843 36 100.0 30 .................................... TAAGAAGTTATCGGAAGCAGTAGATATTAA 52909 36 100.0 30 .................................... ATATTTATCGGTTTGCAACGCGTTGTATAT 52975 36 100.0 30 .................................... TGTCATTGTCATTATTGACTTAGATTGTAT 53041 36 97.2 30 ............C....................... GCGAGGGTGGCCTATTTGGCTTTGGCGGGG 53107 36 100.0 30 .................................... TTAAAGGTTTATAGATATTGGCAAAAAACC 53173 36 100.0 30 .................................... AAATATGGATAAATTTTATAAGCAAGCTGA 53239 36 100.0 30 .................................... GTCGCTCTCTAAATTTGCGAACTCGCTGTG 53305 36 100.0 23 .................................... CCACGCGACAAGCGCGCGACAAG Deletion [53364] 53364 36 100.0 30 .................................... TTAGAATTAAATATCTTTTTCTATCATTGG 53430 36 94.4 0 ..............................A.A... | ========== ====== ====== ====== ==================================== =============================== ================== 101 36 99.9 30 GCTTCAGATGTCTGTCATTTTAATGAGTTCGAGTAC # Left flank : AAACCATTGCGTCAATTGTTAACACAACATTTAGATGATTTACAGTTACGCGAATTGTATGAAACGGATCGCACTATGCGTCACATTGTGCAGCGGGTGTTATTTGAGAATGATTTGCCAGGTGAAATTGACACCGAATGGCAGATTTCAGAGCTTTTGAAATATCTGAAGCTACGCATAGAACTCCCAGAAACACACGGATTTTATGGTATAATAGAGAATATTATTGATCTTTCCCAACGCCTGAGTGATGACAGGTTATTGGTATTTGTTAATGCGAGTGTTTATTTGCGTGATGAACAAATCAAAGCACTTGCATATGATGCAATGTTGAAACAAGTCTCGTGCTTATTTATTGATAAACAGACCACCGTTAATTTTATTGGTGGCAAGGGATTGAAGCAGATTTTTATTGATCATGATTTCGTACAATTTGTGAGTGATGACACAAAAAACGAATAGATGTTTGATAATATATGTTGATTACGAACAACTGGTCT # Right flank : CAAAATACACAATTAAAAGAGGTAAATAATGGATAAACTATTAACGTTTATTTTGATAATTGCCGCGCCGTTCATCGTGATTGGCATTGTCTATTTGTTTGGATGGCTTCTTACTGGTCTTATCATGTTGTTTGGTGTGAGCTATGCAAGCGCCAGGCTTGTAGGCATTGCTTTAGCGGTGTTGATCAGTTTTGGGTTTATCGGTTATCAGGGATTTAAGTAAATGGCCTTGTATACCATCATAATGAACACATAGCCAAATATAAAATCCCCTCACACGCTAATCCGTGTGAGGGGATTTTTACTAGACAATATAATCCGCGTACAACTTGCGTTCCAACTCGGACAATTCAACGGTAATCAGCGTGCCGGTCTCATCATAGTCCTCTTTGCTAAAGGTATGCTTAGCGGCGAGCTTGGCTTGCACAGCGCCTTGGTCAAATGGGATGTGGAGCGTGACTTCTTGGACGTCGTTGAAGATTTGCTTCTTGATTAGGTCA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTCTGTCATTTTAATGAGTTCGAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.00,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //