Array 1 42-315 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCE01000374.1 Streptomyces sp. TverLS-915, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 42 30 96.7 31 .............................A CCATGATCCTCAGCCGGTGCTGGTACCGGGT 103 30 100.0 31 .............................. GCCCCCTCACGGTGACGACCGCACGCTGAGC 164 30 100.0 31 .............................. AGTGACCTGTCCCCCACCCGCAACACCGAGT 225 30 96.7 31 .............................G AGCTGGCTGGACAGCCAACCGCCCATGCTCT 286 30 90.0 0 G...........................GG | ========== ====== ====== ====== ============================== =============================== ================== 5 30 96.7 31 CTGCTCCCCGCGCGTGCGGGGATGGTCCCC # Left flank : GATGGTCCCGCGGGGCCGGACGGGTCCCGGACGCCGGTCGAC # Right flank : GGAACGGCGCGGAGTCGCTGAAGTGGATGGGCTGCTCCCCGCGTGCGAGGAAGTTTCCGCTGCGGGACGGCGCCGCAGGATCGGCCTACGCCGATCCGGGCCGTTTCAACAGCAGTTCGTCCCCCGCGCGGAAGCGCTCGGCGCCGCCCTCCTCCCACGTCACCACCACGAACAGGCCACCCACGTACGACCACGAAGCCTGCTGGCTCACGCAGGCCGGGGGGCTCGGGGCGCAGCTCGCGCGGCGGCTCAGTGGTGCGGGCGAGCCGCTCGTCGATCCCGCGCGACTCGGCCTGGGTCGCTTCGGCGGGTGGGATGCCGGTCGGATACGTACGCCGCGCCCCAGCTCTGCTCGGGGGTGCGCGCCCGTCCGTCTTCGCGATCCGTCCCGCTATGCTCCACCGCATGTCCACCAGCACCCCCGAGCCCGCGCGGCGCGGTCTCCTCACCGAGCGCATCGCACGCGAACTAGAGCACGGGATTCGGACGGGGGAGTACGC # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [13.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1595-1808 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCE01000374.1 Streptomyces sp. TverLS-915, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 1595 30 100.0 31 .............................. TCACCGATGAATCGTCCCCCCTATCGGCGAT 1656 30 100.0 31 .............................. CCGAGATCATCCAGCGCCGCGCGGTCGCGGC 1717 30 100.0 32 .............................. TGCTACGCCGACCGCGAGTTCGACGGGGCCCG 1779 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ================================ ================== 4 30 99.2 32 CTGCTCCCCGCGCGTGCGGGGATGGACCCC # Left flank : ATCGCGGTCATGCGGGCCGCCGTCGTCGCCCTGGAGTGCGCGGACGAGCCGGTGAGCAAGGCGCGGGCGGACCTGGAGTTCCACGAGGCCATCGCCGTCGCGGCCGGAAATCCCGTACTGCGGATCATGCTCTCGTCCATCAGCGGGATGATGTTCGAGATGATGCTGCGCTCGAATTCGGACCCGAGCATCGCCGAGCCGGGCGTCCCGCACCACCCGGAAATCTTCGAGGCCATCGAGCGCCGCGACGCGGAGCTGGCGGTCGAACGGATGCGGGCGCACCTGCGGTTGGGACTGCGGACGTACGGGCGGGACCTGGACGTGCAGGTGGACGTGATGGCGAAGCAGCACATTGAGATGTTGTTGGGGGAGGGGCGGGGGTGAGGGAGAACGGAGGTCGGGCCGCCATGGGTTGTATGTCGGATGTTGTAGATATGCCGGAATTCGCAATTGTTGCGGGCACGGCTCCGGGGCGGGGGTAAACCCCCAGGTCGGAAAGA # Right flank : GGGGCTCGCGGTCGCCTCTCAGACCGACT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 184-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCE01000339.1 Streptomyces sp. TverLS-915, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 183 30 96.7 32 .............................C GTCTGGACGGCGGCGCCCGATCCGGTCAGAGC 121 30 96.7 31 .............................T CTCACGAAGGAACCGCAATGCAGCTCCATTC 60 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ================================ ================== 3 30 97.8 32 CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Left flank : ATCCGCCAACGGGCGGGAGGTGGCGGCCCGTGCGACCCCTGGCGCGTGACGCGGAACGGCTGCTGTACGAGGACACAGCGGTCCCCGGCTTTCGCGTACGGGGCTGGTGTCTGATGTGCGGGAGGTACTCGCCGGAGGGCGTGAACGCGGACTCGGCGCGGATGTGGTGCCTGGAGCACAACCGGACGACCGGTCATGGCAGTTATCGCGTGGCAGAGACGCAGTACTTGGTGGTGGCCCGGGAGGTGGGGGAGCCGGGGCGGTGCCGTTGTGGGAGGGGCGAGCCGGAAGGCTGAGGGGGGCGCGAGGTGAGGCGGTGATGCGGCGGGGAATGCCGCTGGCCGGCTAGGGGGGCGTGGCAAGTCGGAGCGAGGTGCCGCGGGGCTAGGCTTCGAGCGGATCGTGCCTTGCGTCGGCGGTCCGCTACGCCCGAAAGGCCGGATTCCTCGATCCTTGCGCAACTGCCGCCATCGGCCCGCTAAACCTGCTGGTCACACAGT # Right flank : GCGCCCGTCGTTGAGGACGTCGCAGCCGACG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-14.10,-14.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [13.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2891-2372 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCE01000339.1 Streptomyces sp. TverLS-915, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2890 30 100.0 31 .............................. TCACCGCCCCCCACTCGAACCCCGCCCTCCA 2829 30 96.7 31 .............................G CGGCACTGGTGAGGGCCACGATGCGCGCGGA 2768 30 100.0 31 .............................. GACTCGAAGCACGGCGATCCCTTCCTCTCGC 2707 30 100.0 31 .............................. GGCACCGCCGGGAAGAGGATCGAGGCGTTCG 2646 30 100.0 31 .............................. CGTCCCACCCGCAGATCTGACAGCGCATGAG 2585 30 96.7 31 .............................A TCGGCATCATCGGCCGCGCACGGGTCGGCAA 2524 30 100.0 31 .............................. CCTCGCCGCTCACGCGACGAAGACCCCTCCG 2463 30 96.7 31 .............................G CCCAGGTACTCGCGTGGGCGCACGACGTCTA 2402 30 100.0 0 .............................. | G [2381] ========== ====== ====== ====== ============================== =============================== ================== 9 30 98.9 31 CTGCTCCCCGCGCGTGCGGGGATGGCCCCC # Left flank : GCCGTACGGCCTTCGCCCGGGAAATACCCTCCGGGCCGTACGGTACGGGGGGCGCGGACGGGGCTCTGCGAGGCGCGCGGCGGGGCCCACCGACCCCCCGTACCCCGGCCCCTGCCCCACCGTGCTCCCGGGGATGCGCACCGAGCGCCCCCTGTGCCGGGATTCCGGGGCGGGGGAGGGGGTGGGGTGGGTTGGGTGCGGTGGCGGTGGCGGTGGCGGTGGGGGTCACCGTACGGGGAATGCGGGGGGCGCGTCGTGGGGCCGAGGGTATCGGCGCCCTGGGGTGCGATCCGCTGCGTGGCGGCCCCGGGGGCGAGCCGGCTGCGGGCGGGGTGGCCGTGTGGGGGCGGGCGTGGATGGGCGTGGCCACGCGGGGGCGGGCGTTAGGCTGCGGAAGGTCCGAAGAGCTCGGGCGCCGAACCGTCTTGTCCGAAAAGCCGGACTCTCCACTTCTTGCTGAATCGACGCCATCTCGAAGGCAAAAGAGCTGCTCACGCAGA # Right flank : GTGCACGGAGGGTGGCGCGTGCGTTGGCGACGGTCAGATGCGCGCGCTGTCGAGAAAGCGGTGCCACGCTGTTGGGCTGAATCCGAGGTGCGGGGAGGCAGGGTCCTTGGAGTCGCGAACGGCGAGATGGGCCGCGTGCAAGGCGACCTCGACGCAATTCGTGTCGTAGTTGGAGTAGGAGGATTTCCACCACGGAGGGCTCGCACGGCCGGTTGCCAACAGTAGTTCAGTGCGCATGGCGTAGTGCGTCTCCAATGAGGTCGCGGCTTTCTTCCGGAGGAAGGGCCGCCATGTTGAGGCGCCGGAAGCGCGCGTTGAAGCGCTCGGCGGCTGCGGCCTCTTCGTAGTAGATGGTGCCCTCGCCCTGTTCGGTGAAGGCGATGTCGCCGGTATCCGCGAAGCGCAGAATCGCGAAGGGCCCGTAGAGAAGCACGTTGGCGGGGCTTGTCGCCGGCAGCACCTGCAACTCGACGGACGGGAGGGCGGCGGCTTCATAGAGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGCCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 52697-52484 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCE01000004.1 Streptomyces sp. TverLS-915, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 52696 29 100.0 32 ............................. CACTGCAACCCACGGTTTTTGGGCTGCTCCCC 52635 29 100.0 32 ............................. GTGGCCAGGGCGTGCGCGGGGGTTTCCACGAT 52574 29 100.0 32 ............................. TTCGGCGGCGACATGGCCGCACAGGTCGTCCG 52513 29 96.6 0 ........................A.... | T [52486] ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 CTGCTCCCCGCACGCGCGGGGATGGCCCC # Left flank : GAGCGGCGGGCGTGACACTCCTGGCCGAGGCGGCCCGCCTGGTCCGCGAGGCGGGCTTCGAGATCGGCAACGTCTCGATCCAGGTCATCGGCGTCCGCCCGAAGATCGGCAAGCGGCGCACGGAGGCCCAACAGGCCCTGTCGGACGCGGTCGGAGCCCCGGTCTCGGTCTCCGGAACAACAACGGACGGCCTCGGCCTCACAGGCCGCGCGGAGGGCCTGGCGGGCCTGGCGACGGCGGTGGTGTGGCAGGCGGGGTGAGGGGCGCGCGGGTACGGGGAGGACCGACGACGAATCGACACCTCGTACGGACCGCTCCCGACGCCTCGCGTCCCACGCCCTCGCGGACGCGGCGCGGCGGACCGGCTCGCTGGACTGGTTGCGGGGGTGCGGGGGAAGGGTGACGGCGGGAGAGCTATGCACGGTCTGCCGGATATGAGGGAGTGCCCACTCCTTGCCGATACACCGGGCGCCACGTGACAAAACAGCAGGTCACGGAGC # Right flank : CTACGGTCAACGACCACGTTTGGAGAATCCCGCTCCCCGACGCCCGCCCTCACCGCCCCGCCGCAGGACCTGCTGCCCGGCCCGGGCGGGGTTCGGTGGGCCGCACGCGGGGGCTCTCCGTGGGGTTCGGCGCGTGCCGGTTTCTTTTCGGCTGCCGTCCCCGCTCCCAGCCCCTCTTCCCCCTGCCGCCCGGCCCCAGCACCGCCCCGCGCCGTCTACCCTGGACCCCGTGACTATTCGGCTGTACGACACCCGCGCCCGGCAGATCCGTGACTTCTTCCCGCTCGTGCCGGGCTGTGTCTCGATCTACCTCTGTGGTGCGACCGTGCAGGGCGCTCCGCACATCGGGCACATCCGGTCCGGGCTCGATTTCGACATCATGCGGCGGTGGTTCACCTACCGCGGCTACGAGGTCGTTTTCGTGCGGAACGTGACCGACATCGACGACAAGATCATCAACAAGTCCGCCGAGCAGGGTCGCCCCTGGTGGGCGATCGGCT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGCCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 12646-12190 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCE01000262.1 Streptomyces sp. TverLS-915, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 12645 30 96.7 31 .............................T CGCCGCCCAGCGCTACCGCGACGCCGAAGCG 12584 30 100.0 31 .............................. TCCCGGTGGGGTTGAGCACGGCGAGGTGTAC 12523 30 96.7 31 .............................G ACGACCTTGAGCGCTTCGACTCGGAGATGGA 12462 30 100.0 31 .............................. ACCCCCGGCACCTGGCCCAGGCCGCGAAGCG 12401 30 100.0 31 .............................. GGTCCCGGATCGGCCGCTTCCGCAGCGACGA 12340 30 96.7 31 .............................G GCTGGCGACATCGGCTGGGACTGAGCGAACA 12279 30 86.7 30 .................A.A.G.......C GACGGGGGCGCCGGTCTCGATCCTGGGGGA G [12253] 12218 29 70.0 0 .....T....A..C.C...TC...T-...G | ========== ====== ====== ====== ============================== =============================== ================== 8 30 93.4 31 CTGCTCCCCGCGCGTGCGGGGATGGACCCA # Left flank : AGGCGGGGGCGTGCGCGGTTGCGTGGCGGG # Right flank : CTCCAGGGGGATGGGCGAGCATCAACGGCGAGCATCCCCGGTATCTGACGGTTCCCCTCCCGCCCCCCTACCCTCCCCCCTCGCCTCCTGCTAGCCTCCCTCTCGCCCGGCCCAACTGGTCCTACCAGTCGGACCGCCGAACCATCCGCCCCCGAGGAAGCCCCCGCATCCGCCCCCACACTCCCGTCCTCCCCCTCCCCCGCCCCAGAGAGGTGGCACAACGATGTCCACCCCCCGGCCCCCGGTCGGCCGCCCCACAAGCCACCGGCCCCCGACCGGCAACCCTGCCAACCCTCCAGGCCCCGAGGCCCCGGCCTCCCGCCCGGCAAGCAGCACGCCCGCGCGCCCCGAACCCCCAGCCCCGCACCCCGCACGCAACGCACCCCCCACCCCGCCCCCCTCCACGCACCGCCCCCCGCACGACGAGCCCGCATCCCGCCGCCCCCCAGCCGAGCGCCACCCCCACCCCGAGCCCGCCACGAGCCGCCCCCCAGCGGCGC # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.67, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGACCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [33.3-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 15008-14810 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCE01000301.1 Streptomyces sp. TverLS-915, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= =============================== ================== 15007 23 100.0 29 ....................... GAGCCCGTGCCCCCGGAGCCCGTCCCCGA 14955 23 91.3 28 .GC.................... GAGCCCGTGCCCCCGGAGCCCGTCCCCG 14904 23 100.0 28 ....................... CGCCCCCGGACCCCGCGCCCACAGCCCC 14846 23 87.0 31 C..................C..C CCCGCGCCCACAGCCCCCGCACCCGTCCCGG 14832 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= =============================== ================== 5 23 95.7 29 AAGCCCCCGCACCCGTCCCGCCG # Left flank : CTGCGGCACCCGCGCCAGCGCTTCTCGTGCCGCGTCCCGCTCGTCCGCGCCCCCGTACGCCCCCAGGAGAGGCCGCACCCACGGCTCGTACGGGCCGAAGTCGCCGTCCGAAGAGGGTTGTTCGCCCTGCCGTACCGCGACCGTGAGGCGCGCGAGGGCCGGGAGGCCGGTGGCGAAGCCCGGCATCCCGCAGCCGGGGAGCAACGCCACCGCCTCCTCGTACGGCTCCCACCCGCCGCCCGCGAGCGAGGCGCGCAGCGCGCGGAACCACGTCGTGAAGACCCGTACGAGAGGCAGCCCGTGCCGCGCGGCCAGCGCGTCCGCCGCCGCCGCGCACCCCTCCGCCCCCGCGAAGTCCCCGAGCCCGCACCGCGCCTGCATCCGCACCAGGAGCCCCAGCACCTCGTGCGGGACGAGCCCGGCCGCCCCCGCGACGGCGACCAGCTCGGCCCCCAGCGCGTCCCGCCCCACGTCCCCGTTCTGGCCGCCGTCCGCGCCCG # Right flank : AATTCCGCGCCCCCGCCGCCCGCGAGCCCCGTACCCCCCGCCGCCTCCGCGAAGCTCTGTACGAACACCCCGTTCAGCGCGAACACGAGCAGGCCCGGGTCCCCGAGTCGCCGCGCCAGCGCCTCCGCCTCGCGGGCCGCGCGCAGCGAGCGCGCTCCCGCCGCCGCGCCCCGCGACTCCACCGCCACCGTCGCGAGCAGCCGCGCCCGCTCCGCCTCGCGCTCCTCCGGCAGCTCCCGGAGCGCGTCCTGCGCCGCCGCCACGAGGCGCGCCGCCCGCACCGGGTCGTCCGAGCGCGTCCACAGCGCCGGTACGTCGTAGACGCCGATGACCCGTGCCGTCAGCTCCGCGTCCCCGTACCGCCGCGCCTCCGCGACCGCCGCGAGCCGGTGCTCGCGCGCCGCGCTCAGCCCCTCGCCGCCCGTCACGGCGACATCCCGCATGAGCCCCGCCGCCGTCCGCAGGCGGCTGCGGTCCGCCGCCGGGAGCGCCCGCGCGTA # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAGCCCCCGCACCCGTCCCGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [21.7-16.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //