Array 1 4402-5679 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYZM01000048.1 Schleiferilactobacillus similis DSM 23365 = JCM 2765 strain DSM 23365 NODE_94, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ==================================== ================== 4402 34 97.1 34 ........A......................... ATTTATGAGTGTTGTCGACACCGTGAGTGCCTGA 4470 34 100.0 35 .................................. GGAAAATAAGCCATTAAGATGGGAAACCGGCGAAC 4539 34 100.0 36 .................................. AGGTGATTTATGAACTCAACTTGGAACTGATTAAGC 4609 34 100.0 36 .................................. GGCATTAGCATCACCATGTAGATCATAAGAACTCCA 4679 34 100.0 35 .................................. AATTAGAGCCTAAATTCAAGAAAATGAATGAGGAT 4748 34 100.0 35 .................................. TGCCCCACGAGCGTTGACATAGGCGGAACCGTCAG 4817 34 100.0 34 .................................. ATGGTGGGACCGTCACTCGGGTTGGTAAACCAGT 4885 34 100.0 34 .................................. ATCAGCGTTATCGTGCAAGTAGGCGGTGTCGATG 4953 34 100.0 36 .................................. GTTTCTAGCTGGTCTAAGAGCTGCCTGTCAGTCAGC 5023 34 100.0 35 .................................. ACGATGGCTATCAATTTCCTAGCTGTTGTGGGCTT 5092 34 100.0 35 .................................. AGCCCGCAATTCGTCCACAGCGTAGCATGGATAGA 5161 34 100.0 34 .................................. ACCTTGTATCTCTCTAACGGTTTTAATCATCTAT 5229 34 100.0 36 .................................. ATTCAGACATTTAATGTGTCGTTGGTCTAACGTGCC 5299 34 100.0 35 .................................. ACCGGTGAAGACGTGCAGATTGACGATACCGGTAA 5368 34 100.0 35 .................................. AGTATGGCCCGGCGCTACGGGAACTGAAGTCACCG 5437 34 100.0 34 .................................. AACCATTAACCCATCTAATTCGGTTTGTGACGTG 5505 34 100.0 36 .................................. GGCTATTCCAGCGATGGTGATGGCGATTCTGGTGAT 5575 34 100.0 34 .................................. TATACGTCAACTTGAAATGGAGTTAGGCTTTTCA 5643 34 88.2 0 ......................C.....AA...G | GG,A [5663,5669] ========== ====== ====== ====== ================================== ==================================== ================== 19 34 99.2 35 ATCGCACTCTCTAAAGGAGTGCGTGAATTGAAAT # Left flank : CACAGTTGAAGATGCTGAAGATCTCAAGCAGGCATTAACAACATTGTTCGTAAATGATTCTTCATCTGCGCGTCCAGAAGGATCAATGGCAGTGCTGAAACTAATCTGGTGGGAGCACAGCACAATGCTAGGGAAGGTACCACCTTATGTTTTGCATGAATCCGTAAAAGTTGAAGTTCCAGAGAGCGCACGGAAATTTGATGAAGTTAAGATTTCGATTGAAGATTTAAATGATGTTAATGGTGTTACAAGAGACATTGTTAGTGGGTATTAGAATTTAGAATTTCCAAAAAGCAACCCAAATAACGTCGTTCATATTGACAAATAATAATATTATTGCAGGTGCGGACCTCTAGTACACATAATTATTGTGGGGGATTCGCACCTGCAATAGTTGACATTTATGTGAGTTTTGTCAGGTTGTTTACTAGTTGATTGTTATATATTGAATCGTCTCACTAGATATAGTTAAACTAGCGTCTGATATACTATATCTTGGG # Right flank : TGTACAAGTTGAATAGAGACTCTGATTTAGTATAATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACTCTCTAAAGGAGTGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.82%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.60,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : NA // Array 1 10007-8462 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYZM01000016.1 Schleiferilactobacillus similis DSM 23365 = JCM 2765 strain DSM 23365 NODE_26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ===================================== ================== 10006 34 100.0 35 .................................. ACACGGTGACGTGTTGGATCGGTACGGCACTGAAG 9937 34 100.0 34 .................................. TACACGGTGAAATGGTAGTGATCGTTACCTCAGT 9869 34 100.0 35 .................................. ATGCGTGCGTTAAAAATGCTCTGTATGATGGCGTT 9800 34 100.0 35 .................................. ATTAATAAAGGCGGCTTTAAAACAAAAAAAGAAGC 9731 34 100.0 35 .................................. ACGAATGAAGTCGCCACGACTACCAGAGCCATAAT 9662 34 100.0 33 .................................. GTCATCCATCAGTCCGTGAAGGAGTCCAACCAC 9595 34 100.0 35 .................................. ACCGAACATGAGTGAAAAGAGTCAACAAGGTCAGG 9526 34 100.0 33 .................................. CAAACCGCCGCCAATGATTCTGGCGGGGCGTTC 9459 34 100.0 36 .................................. CATGTTGGCTACCGTGACTTCATAAGTTCCGGCGGG 9389 34 100.0 37 .................................. ACTGTCGGTTGTTGGGTATTGGATCAACCCGGTGCCG 9318 34 100.0 35 .................................. GACTTCTTAGTCGTCTTGGCGTACGCCTTAGAAAT 9249 34 100.0 35 .................................. ATTGATACGGAACGTGGTAGTGTCGGTAAATGAAT 9180 34 100.0 35 .................................. ATTCCTCGTCACCGTCCTTAACCATTTCAAATCGT 9111 34 100.0 35 .................................. CGGTCAGTATTAGGTGGTAGCGGTTCTGTTCGCTC 9042 34 100.0 35 .................................. TCAACTAACGTTGAAATTAAGCTCTACGTAGGCAT 8973 34 100.0 34 .................................. ATCCATTTTTGATGGTAGATCTATGACGCCAAGG 8905 34 100.0 37 .................................. CGGTAAATCGAGAACAGTGATGTGGGTGTAGTTACTC 8834 34 100.0 33 .................................. ATGTATGTGGACGAAGAAGAAGCTCAAATCGAG 8767 34 100.0 35 .................................. GAACTGTCGGTATGACTGGGCTTCGCCGAGGTGAG 8698 34 100.0 34 .................................. CGTTCGCAGTGAAGATTCCCGATAACCGCGTTGA 8630 34 97.1 34 ...................T.............. ATAGAAGTGCATTGGTGTTGTCATTTAGTTGGTT 8562 34 100.0 33 .................................. ACCCATGAGTGGGCGCTGGCCGGCGAGTTATGC 8495 34 76.5 0 ....T...A.....CA...TAG.......A.... | ========== ====== ====== ====== ================================== ===================================== ================== 23 34 98.9 35 GTCTCGCTCTTTCGTGGAGCGAGTGAATTGAAAT # Left flank : ACTAAATGTTTTAATGTTATTGATAGTCCAACAACTGACGTTATAGTTGAATATTCAATGGATGATGAAAAATTTAGCGGTACCTCAGGGGATACTGAAAGTCACGATATTATTACGCAGTTACTCTCCGAACAAAGTAAATTTGGTGATGTTTCTAAATTATTGAAAGCGGCTAGACCATACACAGTATCCGTCTATGATGGTGCATTGAAAAAACTACAAGAAGAAGGCGCCGTTCAGTACTACGAAAATCAAGATATTTGGGTTGTTTTGAAGAGTGCCTATAGTCCTGAGTTTGGATTGGGTGGCAACGAATTAAATCCAGACGAATTTATGTTTTAGGTGCGAACCGTAAGCTCACATGTTTTTTACGGAGGATTCGCACCGATAATATATGACATTTTGAATCAAAGTTACAAAGTAAAATTTACGAAGTATGTATTATATGTATCGCTGCACTATATTTAGTATTGATATATGAACATATACTAAATGTTGCG # Right flank : ATAAAATTGAAACCTAATTAAAAATTGGTACGTGTCTCATACAACTCAGATGTGTAAATTCAAATACAAGACAACTACCTACTGTGAAGCGTATAATAAGCCTAATCTAATCATTTACGGAGGCTATTCATGACAGAAAATAACACTCATTTCTATACCAAGTTCCACCCATCAAACTACAACGTCTACCTAGACATCAACCGCGCCACAAAAACAATCAGCGGCCAAACCACCATCACCGGCGAAGCCCTAACCACCGAAATCTCAATCCACCAAAAGGCCCTCAAGGTAACCAGCGTCCAATCCCAAAACACGGACGTCCCATTCACCACGGACGATGCAGCAGAAGCCATCAATATCACGCTGCCATCAACCGGTGAAACAACCTTGACTATCGACTACACCGCGCCATTAACCGACGCCATGATGGGCATCTACCCATCCTACTACGAGGTTAACGGCGAAAAGAAGCAAATCATCGGCACGCAATTCGAAACCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCGCTCTTTCGTGGAGCGAGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.94%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 13134-12896 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYZM01000016.1 Schleiferilactobacillus similis DSM 23365 = JCM 2765 strain DSM 23365 NODE_26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =================================== ================== 13133 34 100.0 35 .................................. ATCATTGTTGTATAGATCAGACAATAAGTCGTTGG 13064 34 100.0 34 .................................. CAGACCCAACCAAATTTTTAGCAACTAAAGCCGA 12996 34 100.0 33 .................................. ATCGCTAACATCAAAGGCCCTCTCGCATCCGCC 12929 34 94.1 0 ..........T............C.......... | ========== ====== ====== ====== ================================== =================================== ================== 4 34 98.5 34 ATCGCACTCTCTAAAGGAGTGCGTGAATTGAAAT # Left flank : GCATAGGACAAAAAAGTCTCTATTTAAATTGTCTATTTTATTGACAGGGGACCAGAGTGCGTGAATTGAAATACGTAAGGCTTCGTATTGTGACTTGGTAAATGC # Right flank : AGCTAATGCCTTGCGTAGGCAGAATTGAGTTTAACATTGCACTTACTCGAAGGGGGAGACTATTCTCGAGGAAAGACCTGTGTAGGAACTAAATTCTACGATGAGTATTCACAAGAAATAATTTAACGAATTATCACTTTATATTAGAACGTAAATTTGAATTATGAGCCTAATAGGAGGTTTTATGATGAAATATATCGCACATATTGGTCGGGATAATGATCAGACGCAACTTTTAAGCGATCATTTGACTACTGTTCGTGACATGTGTGAAGAGTGGGGAAGATCGATTGGACTTAGTCATGTTTGTGGATTAGCAGGCTGGTTGCATGATTGCGGAAAGTATACCGATGAATTTCAATCATATATTCTGAGAGCACATAATGGAGATCCTAAAGCGGTTCCGGGAATAGTAGACCATTCTAGTGCAGGCGGTTTTTATTTAATCCAATGTATTGAAAAATATAAAGATGTAACGGGTTTAGCAAACCAGCAGCCTG # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACTCTCTAAAGGAGTGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.82%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //