Array 1 90442-93711 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIJZP010000003.1 Streptococcus sp. 2018162 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================== ================== 90442 31 100.0 34 ............................... AATATCAGAAAATGGTTTCATGGTAACTCCTTAG 90507 31 100.0 35 ............................... AAGACTTTGTTAGTACATTGATGATGGAAAGCGGG 90573 31 100.0 35 ............................... GTTCTTCCCTGGTACGAAAGTATCCAACGATGTCG 90639 31 100.0 36 ............................... AGTCTTATTGAATTACAGAAATTTATGAATAAGCAG 90706 31 100.0 35 ............................... GCCAAAGTTGCGTTGATTCAATTCGCAGAGCAAGG 90772 31 100.0 36 ............................... AGTTGAAAATAAATCAATCTTCCAAATACTCTATCG 90839 31 100.0 36 ............................... ATTCGACAAATAGCGATAATATACCTCATAGTCTTG 90906 31 100.0 36 ............................... TGCTAACACAGGTCGTGATGCCAAAAAAGAAATTAG 90973 31 100.0 35 ............................... CGTCCGCAGCTGTTCCACTACTTCCACCAGCAGAG 91039 31 100.0 35 ............................... ATAATCATCATCTAACACAGTCTGGAAAGGACGAG 91105 31 100.0 35 ............................... ATAACTACCTTGAATTTTTGAAACAGTATCAGCAG 91171 31 100.0 34 ............................... ATTTGAGTTTTAACAGTCCACATGTCTAAATTAG 91236 31 100.0 34 ............................... TACTACGTTTGGTTGGATAGAAGTCCACTTTGTG 91301 31 100.0 40 ............................... ACACAAATACCTGTTGGTATTCTTCCTTATAAAGGTCACG 91372 31 100.0 35 ............................... ACACAGAGGAAATCCACCACAAGGGCTTGGAAATG 91438 31 100.0 35 ............................... TCAACTACATTAGAAAGGTAATAAAATGGAAAACG 91504 31 100.0 37 ............................... CCGTTAAGCTTTATCTTATCAGGATTGGTAATACGAG 91572 31 100.0 36 ............................... ACTAGTCAGCCGATGGATATTACTGATGATGGATTG 91639 31 100.0 36 ............................... GATGCAGAGGAGGTACTAAATGACTAACGAAAAACG 91706 31 100.0 36 ............................... AACTATACAGTTTAAAACAACGTTAGAACGTGATAG 91773 31 100.0 34 ............................... TGTACCTACAATTGTTACTTCCGAATCTACCACG 91838 31 100.0 35 ............................... TGTGACTGAACATAACAGTCGGACGGTTGATTATG 91904 31 100.0 35 ............................... TTGTTTTTGAAGTTACGATTAACGGCAATAGTACG 91970 31 100.0 34 ............................... ACACACCTGAAAACAAATTTCATTGTTTAACCGG 92035 31 100.0 35 ............................... AACATCAAATCACGAATTTTAAATTTTGTCAAGCG 92101 31 100.0 35 ............................... GGAACTGCTAATGTAGTCGTTACTGATCAAGCCTG 92167 31 100.0 34 ............................... CAATGTCATATATAAATGCAAACCTAGAAGTGAG 92232 31 100.0 35 ............................... CGGTAAAAATTGCCGAATACATAGCTTGGTAAAAG 92298 31 100.0 33 ............................... ATCCAAACGGACCCCGTATTTTTCCATATCAAG 92362 31 96.8 34 .......................G....... CAACGTATTGCTTCTTCTAGTGCTAGTGCTAGTG 92427 31 93.5 34 ..........C............G....... TACTATTGTAAAACTTTTAAACAGAGTAGCAAGG 92492 31 93.5 35 ..........C............G....... AAGCAAGTTCCCACTTGGGCTGTTGGTCATGGCAG 92558 31 90.3 35 ..........C.......T....G....... TGAATCGTCAAATGATGGCGGCTTTGTCGGAATTG 92624 31 93.5 36 ..........C............G....... AATGGGGGCTAGGTCTATTTGGTCTTACTAGTCGCG 92691 31 93.5 34 ..........C............G....... TCCTTTAAATAATTCCAACAGTTCTTGCTTTTTG 92756 31 93.5 35 ..........C............G....... AGATACAAAGGCGCAAGCTGTTGTTTCAGAATTTG 92822 31 93.5 35 ..........C............G....... CTAGCGAGGGGGCAAAACTAGACATTACTCCATCG 92888 31 90.3 33 ..........C........A...G....... TTGCCCTTGTATTCAAAAGGCATAGTCATTCTG 92952 31 93.5 35 ..........C............G....... AATCAGTGTAGCATACTGTTTCAGATGATAGAAGG 93018 31 93.5 37 ..........C............G....... ACTCTCTGTCTCCTTTATGGTATAATGTATGTGAGTG 93086 31 93.5 34 ..........C............G....... AATCCTTCCCAAACGTTTATTGTGTTGTTTAAGG 93151 31 93.5 35 ..........C............G....... GCTTTTTGAACCAGCCAGCCGTTAGACTTTTCCAG 93217 31 93.5 36 ..........C............G....... ATCATGCAACTTGTCAAGTAGATAAGGAGCGTCCGG 93284 31 93.5 36 ..........C............G....... CACAAGATGTCTGGACAGAAATTAAGGCTTATATTG 93351 31 93.5 35 ..........C............G....... GAGCGCTTTGGTATTAGCTTGACCGATGGATTGAG 93417 31 80.6 34 ......T.TTC...A........G....... CACATATAGCGAAACAATCGCACGCTATCATGCG 93482 31 80.6 35 ......T.TTC...A........G....... AGCATTTCCAAGCGTAGCTTGGAAGAAGTGATTGG 93548 31 80.6 35 ......T.TTC...A........G....... GGGCAGATGTTATGTCACAAGCGCAGACTATACTG 93614 31 80.6 36 ......T.TTC...A........G....... CCTGCTGTCAAGATGTTGGACCACCTCCTCACCGTG 93681 31 74.2 0 ......T.TTC...A..A.....G.....G. | ========== ====== ====== ====== =============================== ======================================== ================== 50 31 95.8 35 TCGCACCCCATACGGGTGCGTGGATTGAAAT # Left flank : CAAAGGCTATTCGAGGCGAGTTGGACAGTTATCCTCCCTTTATGATATAGGGGCTATATTATGATGGTATTAGTGACTTATGATGTCAATACAGAAACAGCAGCTGGACGAAAGCGGTTGAGAAAAGTAGCCAAGCTGTGCATTGACTTTGGACAACGTGTGCAACATTCTGTTTTCGAATGTTCAGTCACTCCAGCAGAATTCGTTGAAGTAAAGAATAGATTATTGGAAATCATTGACAAGGAACAGGACAGTATCCGCTTTTATATGCTAGGAAAAAACTGGCAAAATCGTGTGGAAACGATTGGGCGAGATACTAGTTATGATCCAGATCAAGGAGTCCTTCTGTTATAGATTATCTCTGCGAATCGGGCTCACTCATTAAATGTGGGGAGATTCGCGTGAAAAGCATATGAAAAACAGTGAAAATAGAGTGAATTTATGGTATATTCTATATCTGTAGAAACTTTATTTTTATAAAACAGTGTCAAATGGCACTG # Right flank : TAACGTATCGACAGACTAGCTGCTCGGACGGACCGGTTGTACTCTTTGCGTATGCGTAGGTTGAAACTGTTTTGGCTTAACACAGTATATCTGGTATGGACGTGTTCGAAGTTTTCCTCCTTTAACTCATCTCCCCCACAATTTTCGAAAATTCTTGTTTTGTCTTGCTTGCTTCATGCTATAATAGTTGTATCAGTTTTTTAAAAGGAGACAAAGATGACAAACCTAAAAGAGCAGGTTGGGATTAAGGCGGCGGAATTTGTGACGGACGGGATGATTGTTGGGCTGGGAACTGGTTCGACTGCATACTATTTCGTGCAGGAGATTGGTCGTCGGGTTGCGGAAGAGGGCTTGCAGATCACAGGCGTAACGACCTCTCATGCTACGGCAGAACATGCTGCGTCCCTTGGGATTCCACTAAAAAATATCGACGAAGTCGAATATGTGGACTTGACGGTGGATGGAGCAGATGAGGTTGATGGAGACTTCAATGGGATTAA # Questionable array : NO Score: 8.97 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCCATACGGGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACCCCACACGGGTGCGTGGGTTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //