Array 1 154313-152491 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLXH010000004.1 Lacticaseibacillus rhamnosus strain F NODE_4_length_195434_cov_112.020967, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 154312 36 100.0 31 .................................... TTTAGAATACGATTATAAGACAGTAGTTTGG 154245 36 100.0 30 .................................... AGTAAGGTAGCCAAATACAACCATAAGGGT 154179 36 100.0 30 .................................... AACTATCTAACACGCTATACACAGAATGGC 154113 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 154047 36 100.0 30 .................................... TGATTTGCGAGATGTCGCGATAAGAAGTCA 153981 36 100.0 30 .................................... GACAACAGACTCCGTCAACATCAGTCTTAA 153915 36 100.0 30 .................................... ATAAACATCGTATGCGAATCGTAACAACGT 153849 36 100.0 30 .................................... AGTTGATTGAGGCGCGGATGTACATTCCTG 153783 36 100.0 30 .................................... CCGTTTTGGTTGCAAAACGAACCGATTACG 153717 36 100.0 30 .................................... AAGGTGTACTGCTTAGCTGACTCCCACGTG 153651 36 100.0 30 .................................... CTCGTGACTTGTCGTGATATGCATACGCGC 153585 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 153519 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 153451 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAAGCT 153385 36 100.0 30 .................................... AAATGGTTTGAATACCCTTATCCCGCCATT 153319 36 100.0 30 .................................... TAATGACGCTTAACGCTCTCCGGTTGGTCT 153253 36 100.0 30 .................................... AGTCGTGCAAATCCACGTGCGCGCGTTGCA 153187 36 100.0 30 .................................... TTTTATGATGGGCTTGTATTTTCCCAAATA 153121 36 100.0 30 .................................... GGCAATTTTAAAGCCGTGACCGATGCCACG 153055 36 100.0 29 .................................... ATGACGCAGTTGGCGAAACCTTTGCACGT 152990 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 152924 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGTT 152858 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 152792 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 152726 36 100.0 30 .................................... AAGCAACATATCAATCAAGCCGAAAAAAAG 152660 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 152594 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 152528 36 86.1 0 .......................AA.C....G...G | T,C [152494,152500] ========== ====== ====== ====== ==================================== ================================ ================== 28 36 99.5 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : ACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //