Array 1 1422916-1417006 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001555.1 Methanofollis liminatans DSM 4140 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1422915 32 100.0 33 ................................ CCGGTGATACAGTCATAAAACGTTCCGGGCGTG 1422850 32 100.0 36 ................................ GGGTCGTGCTTGGGCTTCCTCGGCGGGAACTGAAAG 1422782 32 100.0 33 ................................ CATACCGGATACGACGAACCACAAGAGCGCGCG 1422717 32 100.0 33 ................................ GAAGATCGTCTGATCGGCTTCGGCAACGAAGGC 1422652 32 100.0 33 ................................ CGGTAGAACTCCGATACCGGCTTGACCTCGCCG 1422587 32 100.0 34 ................................ ATGGGATGTATTGCCACTCTCGCCGGGTTCGCCG 1422521 32 100.0 35 ................................ TATATCGAGGTGCCGTGATGGCGGGGATGAATGCG 1422454 32 100.0 35 ................................ AAGGTGTGGTGGGAGACGCAGAAGGGGGCATCAGG 1422387 32 100.0 34 ................................ ATGTCGCCCCGGCGGTTGCCGATCGAGGACAGGG 1422321 32 100.0 35 ................................ GTCGGCTGTAAAGATCACACAACGACCCAGGTCGG 1422254 32 100.0 33 ................................ ACGTCGAACGTCTTGACCCGAACGCCCTTGACG 1422189 32 100.0 33 ................................ GCTGATCTCGATGTGTGTCATGCTGTGATCTCG 1422124 32 100.0 35 ................................ TCAGGGGTCGCCCTCACCGTGTGGGACCTCTCCCG 1422057 32 100.0 35 ................................ ATGATCTTCACGTGCGAGGTGTGCGGGGCAGAGTG 1421990 32 100.0 34 ................................ ATCGGGGCGTTTCCACATGCGCATAAGGACGATG 1421924 32 100.0 34 ................................ AGGATAATGCGCCCGGATGAACTGCACGACCTCG 1421858 32 100.0 35 ................................ ATCACGGGCGGCAGGGGAGATGATGAGGGCGGGCG 1421791 32 100.0 36 ................................ GTGCCCTGCATGGGGCACATGATACACCCGATCCGG 1421723 32 100.0 34 ................................ GTCTTTGACGGTTCTAAGGTAGCCGAGGCACCCG 1421657 32 100.0 34 ................................ TGAGTGGTTCCGCATGGTCACGGAGGATCGGATG 1421591 32 100.0 33 ................................ GAGCAGGAGTGCATGGCGATGGGTAAGCCGGTG 1421526 32 100.0 34 ................................ TACAACGACGACACCATTGAAACTCGAGTAGTCG 1421460 32 100.0 35 ................................ ACCGAACTCTCTGACAAACTGCGGAGGGCCTATGG 1421393 32 100.0 33 ................................ CCGCAGATGCCGGTTGAAGGCCGGTGCTACCTG 1421328 32 100.0 34 ................................ ACGGAGGCCGATGTCGAATATGTGATGCAGAAGG 1421262 32 100.0 33 ................................ ACATCGGCATGATCAACGTGCCCGCAAACCGGG 1421197 32 100.0 33 ................................ AGAAGGGTGTCGTGGTCATCCATGAGCAGGCGG 1421132 32 100.0 33 ................................ GTCCCATCCGGGATGAAGGCATCCGTGGTCGAG 1421067 32 100.0 33 ................................ GTAGAGGTGGCGATATTTTTCCAGTGGGTCATC 1421002 32 100.0 33 ................................ CTTAAGCCACGGATGTTCTTCTTTCAAGGCCGG 1420937 32 100.0 32 ................................ CCGTTACGACCATGTGTCTGGCGACGTTGTCT 1420873 32 100.0 33 ................................ ATGAGTGTTCTGAGCGGCCTGAGTATGGGGGCA 1420808 32 100.0 32 ................................ CAGAGAGGTCCAGTACCCAGACACATAGCCAT 1420744 32 100.0 31 ................................ GTTCAGGTGCCGGTTGAGGTCCGCCAGGGCG 1420681 32 100.0 33 ................................ CCGGCGGTGCCGGAGGTGTTGCCGAGGACGGTG 1420616 32 100.0 33 ................................ ACTTCAGGCGTGCCTGAGCCGTAGGTGTTGGTG 1420551 32 100.0 33 ................................ TTCGTTCCGGTGTCGGAAATGTGGATTTCAACT 1420486 32 100.0 32 ................................ GTGGGCGTCGCCGTGTGCGATACCTGCTGCAT 1420422 32 100.0 34 ................................ AATGTTAATGCAAAACCAAGCACAGAACAATCAC 1420356 32 100.0 32 ................................ CGAGTATCGCGGGGCGTCGGCGTCCGGGGTGA 1420292 32 100.0 32 ................................ GCCGACAAATGAGGGATCGGCGGCGGGGTCGT 1420228 32 100.0 33 ................................ TCAGTGATGTATCCGTCGGCGACGACCTCGACG 1420163 32 100.0 32 ................................ TCCAGGCACGTACACGGTTATTTTGACCGCCT 1420099 32 100.0 34 ................................ AATGTAATGGTCGGCGGGGATACCGTCTGGTCAA 1420033 32 100.0 33 ................................ ATCCGCAGCTCGGCAATCGCCCCGTAATAGCAC 1419968 32 100.0 33 ................................ AAAGCGAACCGTGCGAGAGTGAACACCGGCAAA 1419903 32 100.0 34 ................................ ACCGACGCCTCCGCTGAGACCGCGACCAACTGGT 1419837 32 100.0 32 ................................ GTCCCGGAGATGCGGACCGGGACCGAGGTCAT 1419773 32 100.0 33 ................................ TACGGCCTGCGGGTCTGCAACCAGGACCAGCGG 1419708 32 100.0 33 ................................ AGGTTTTCCTGCGAGAATCCTGCCGACATGAAG 1419643 32 100.0 32 ................................ GATTGCGCGGGAGTCGCCGATGTCCTTGCCCC 1419579 32 100.0 33 ................................ TCGGCCAGCGTGATCGTCGTCTCGCCCTCGAAG 1419514 32 100.0 33 ................................ AAGTGGTTGGCGTTGCTTGATCGTGTCGGTTCG 1419449 32 100.0 34 ................................ TTGCCTATGATGATCTGGTCGAGCACATATCCTA 1419383 32 100.0 34 ................................ CCTCCCCAAAAACATGGAGAGGGCTACCACTGTT 1419317 32 100.0 33 ................................ CACTCGCCAGATCCACAATGCCCTTTGCCAGTG 1419252 32 100.0 32 ................................ AGACCGCCTCCGGGTAATACTCGATGCGGGCG 1419188 32 100.0 33 ................................ GATTTTGCGATCGCCGTTGCCGTTTTCGAGGCC 1419123 32 100.0 31 ................................ CACTCGCCAGATCCACAATGCCCTTTGCCAG 1419060 32 100.0 34 ................................ CGACGCCACGCGACGGCAGCGGGGGTATCGGCGG 1418994 32 100.0 33 ................................ GCAATCGCCCAGAGCCCAGCCCCGGCGACGAGG 1418929 32 100.0 33 ................................ TGTCGATCTCCGTAAGAAAGGCAAATCCACCAG 1418864 32 100.0 32 ................................ AGCGATGCCGAGGGCCCGGACCAGGTCGGCCC 1418800 32 100.0 33 ................................ TTCGATGCGGCGTTCGCCGCCGCCTCTGTCCGG 1418735 32 100.0 34 ................................ CGGGAGGTGTCGGGGGGGTATCTGGAGTCGCCTC 1418669 32 100.0 33 ................................ CCGACCAGTACGGGCACAGTTTTACCTGCCCGG 1418604 32 100.0 37 ................................ CGCGGCCGGGTCTCAGAGGCATCCCCGACGGTAGATG 1418535 32 100.0 34 ................................ TCAGCGAACCCATCCCCGATCACCAGGGCATCTG 1418469 32 100.0 34 ................................ GATGTGGCGCCCCACCAAGTGATCAGCGCTGGCG 1418403 32 100.0 32 ................................ AGCATTCCCCGGCGAGGCTGCATGAGCAGACC 1418339 32 100.0 34 ................................ TTAACGCAGGCGGCGTTTGACGCAAAGGTGGATC 1418273 32 100.0 32 ................................ AGTGCTTTTGCAGGGTTGGTTGGTGGGAGACG 1418209 32 100.0 34 ................................ AGATACATGATGCAGACCTCTCGAACCTTCCGGA 1418143 32 100.0 34 ................................ TCGCCTCACGAACGCCCGGACGCCGACCACCCAC 1418077 32 100.0 34 ................................ TCGGAGGTGCAGGGGTCAGGCGGCTATATCGAAC 1418011 32 100.0 33 ................................ CCACACTTTTATAAGACCTGAACAGTCCAAACT 1417946 32 100.0 34 ................................ GATAGTGTCGGCGTCGTAGAACGTCAGCCCGATG 1417880 32 100.0 33 ................................ ATAATATGCCCACAGTTGATCGAGGTCCCGGCC 1417815 32 100.0 32 ................................ AGGTAGGAAAAAGGGTTCCAACTCATAGGTAT 1417751 32 100.0 31 ................................ TCGCGTATCTGGACGACCTCGCCGAGGCGTC 1417688 32 100.0 32 ................................ ACGCACCCCGCCGCCGTCCGGGTCAGACCACT 1417624 32 100.0 34 ................................ CCGGAGACCACCGAGGAACTGTACCTCGACGCCG 1417558 32 100.0 32 ................................ ACCGGCATCTTCGGCAGCATCCTGGACGCCGT 1417494 32 100.0 35 ................................ TGACCCCACAGTATCGCAGTTCCTGGCCTCAAATC 1417427 32 100.0 33 ................................ CTGAAGAAACCCGGGCAACATCTCCTGGAAATC 1417362 32 100.0 34 ................................ AGGGCGCAGCCTTTCCCGGGGACGACCTTGTTAA 1417296 32 100.0 33 ................................ ATCTTGGCTGTTTAATCCGGTGTTTTTGCCCGA 1417231 32 100.0 33 ................................ CTCACGGATTACTACAATCCCTACGAGCACCCG 1417166 32 100.0 32 ................................ GAAGAAGGCGAGCTGGATGGTGCCGACGGATT 1417102 32 100.0 33 ................................ AGGACGTTGTTGACGGTGGCCACGTCGACCCCG 1417037 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 91 32 100.0 33 GTCGTGCCTCACGCAGGCACGTGGATTGAAAT # Left flank : CACGGTCGCGAGGATCTGCACGAATTATGGGACACGCGTGCAGAACTCGGTCTTTGAGTGCGTAGTGGATTCGGTTCAATTGATGGAGATGAAGGTGAGAATCGGTGAGACCATTGATCCCGTGATTGATAGCATACGATATTATAATCTTGGGAAGCATGGTCGGGATCATGTGGAACATGTGGGGGCAAAGCCGGGGCTGAATGTCGAGGATGTGCTGATCCTGTAGTGATGTCTTTTGGGGTGTTGCGAAGGTGTAGTGCCCATGTTTTCCCGGGGAGGTTCGCGATCGGGCAGATCTTGGATGTTTTTCAACACGGAGTATTTTTCTGGCATTTCTGAAGTGTACCGCGGCATGGCAGAGGCGGCTGGTGGTGTGATGCGCTGTTTTCGTGTTTCAGGCTGCCGTTCTATGTTGTTTATGCTTGTTATCGGATATGGTGACAATACTGCGACGTTGGGGCAAGAAAGATATTTGTCCTCCAATATATAGTGTAGAG # Right flank : TCCGCGGTGGAACAAAAAAAGGAATTACAGTTTCAAAAGCCCTTTCTCACGCAGGTAATTCCCCGGCCCGGTCGTTGCATACATCGCCGCCAGGATCTGCTCCAGAGAAAGGAGGATTGAATCGCCGGATTCAAACGCATCTGCAAGCATCTTCAGTCCGTCCTGGATGCGTTCGAAATGAATCGGCTGAAGTTCGACCGTTGCATCTCCCGAGCGGATGCGTTTGTAGCGTTCCATCAGTCCGTTATACGTGGTGTTCAGAACAAAATCCGCCAGCAGATAATCTTCCGTAAAGGAATACCTGAGTGTGCGGCTCGTAATTCCGTATGCTGCGGAAAGATAGTAGATCTTCTTCTCGACCTTCTCCTCCCTTCTCATAGATAATTCTACACGCCGCAACTCTGCGACCAGTTCTTTTCTGAAGAAATCATCCCGTGACATCATTTAACCGCCTATTGGATATATCCTGGAAATTCGTTATTGTAGTCATCTGCCGTTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTGCCTCACGCAGGCACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 2 2423284-2418358 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001555.1 Methanofollis liminatans DSM 4140 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 2423283 31 100.0 34 ............................... CTACCTGTCCGGAGGTCTGAAAACCCGCCCATTG 2423218 31 100.0 36 ............................... AGATACCAACACCAATGCGGACGCGTACGTCTCTAG 2423151 31 100.0 34 ............................... CACGGGTAATAGGTGTAATCGCCGGCGGTCACAG 2423086 31 100.0 36 ............................... TTGGTCTGGAGTTTGGCCTCCACATCGGAAAACGCG 2423019 31 100.0 35 ............................... ACCAACGAGGGTTATAATTTGGATAGACTCTGTTG 2422953 31 100.0 35 ............................... CTGAAAAAAACCGAACCCGTAAACGTCGCCCTGGG 2422887 31 100.0 35 ............................... GACATCGGGAAGGGGGAGGAGATCCTCACCCTCCG 2422821 31 100.0 36 ............................... CCCTGCCAACCGTTTTCTGTCGCCGGGAAGTTACTG 2422754 31 100.0 34 ............................... TCTATTTTACATGAAGTCGGCCAGGCTCAGCCCG 2422689 31 100.0 36 ............................... AGGCTGTAATACCTTGATGGGGTGGCCGTCCTTGTG 2422622 31 100.0 34 ............................... ATGAGGATAGGATAGAGGTTGATGGGCTCCGCTG 2422557 31 100.0 35 ............................... AGACAGCCAGAGATCCCCGAACGGATCAGCGCACG 2422491 31 100.0 37 ............................... CCTGGGTGGAGGCGACGAAGCCGACCCCGAGAGAGCG 2422423 31 100.0 35 ............................... TCTGCTCGGCCCGATACGCAGCCTTTTTCTCAAAG 2422357 31 100.0 37 ............................... ACCCTCTCCAACACTATTGGCGGCACCTGTCAGGTGG 2422289 31 100.0 35 ............................... TCGATGCTGGCGATGTCGATCGGCGAGGACTGGGG 2422223 31 100.0 36 ............................... GCTGCCATCGATCGGTGGGCGCGGGAGAAGCAGCTG 2422156 31 100.0 35 ............................... ACGCCGGCGGCGTCTCGCTCACGGGCCTGAACCGG 2422090 31 100.0 34 ............................... AGCCTCCTATACTGAGGTGGCAGGGCAGATGGTG 2422025 31 100.0 36 ............................... CACAGGAGCCACACGCCGATCCCGCCGAGCACCACG 2421958 31 100.0 35 ............................... CGATCTCGGTCTCGCCGACGCCTCGGCCTTCACCG 2421892 31 100.0 38 ............................... ACTCAGCCGAACGAGAGCGGCGACGGGTTCGTCGGGGG 2421823 31 100.0 35 ............................... AGGGCGGTAGGAGGAGCGTGAATGGATGCCCCCAG 2421757 31 100.0 36 ............................... GCTCCCCTGCTATCCCCGATCGTCGAGCCGTGCCCG 2421690 31 100.0 37 ............................... AGGGTCACGGTCTCGCAGCGGAAACTCCCGCAGCACG 2421622 31 100.0 35 ............................... TACCGGCCTATCCACGGCCCTCATACGCGACCTGG 2421556 31 100.0 35 ............................... GGGTTGGCGACCGGCCAGTCGATAGCGTCCTCGAG 2421490 31 100.0 34 ............................... ATCTCCGGTCTCTTCGATGGCATCATCCAGATGG 2421425 31 100.0 36 ............................... AAGGGCAGGGCTGTTGGCTGGACGTAGGTGGTGAAG 2421358 31 100.0 35 ............................... CCTCTCCCCTACCACCGCCGCAGTCGGCGACCCCG 2421292 31 100.0 35 ............................... ATCGCTATTAGTTTGTCGGACTCCATCTTAATCCG 2421226 31 100.0 35 ............................... ATCCTCGCCGTTGTGGCATTCGCGATCGCTATTGG 2421160 31 100.0 34 ............................... GTTATGCGCGGCGGCACCGAACGGGACTACCTCG 2421095 31 100.0 35 ............................... AACAAGCGCCGCTCATCGACCGTGCTCGCCCGTTG 2421029 31 100.0 35 ............................... CCCATATACTGTCCACATACACCATAATCAGGGTG 2420963 31 100.0 36 ............................... CCCGAAGGGAGAAGACACGCAATCGTTTGACCGAAG 2420896 31 100.0 37 ............................... AGACTTATGTGTATAGACGAGCATACAATTCGGGCCG 2420828 31 100.0 35 ............................... CCTCACATAGCCGTCTTGAAAGACCCATATTATAG 2420762 31 100.0 36 ............................... ACCGAGGTCACGATTAACTTCCATTTGCGTTCAAAG 2420695 31 100.0 36 ............................... ACCCTATCGTATTCACGCATTGGCACGCCCTTGAGG 2420628 31 100.0 35 ............................... ATCAGAACCGCCATGATGTTTTGCCGGGACTCGGG 2420562 31 100.0 34 ............................... CATATCATTCGTAGTCCCGACATTGCGGAGCCAG 2420497 31 100.0 35 ............................... TTTCAGTGTGCGTGCATGCGTGTGTCCGTGGAGGG 2420431 31 100.0 35 ............................... GCGTAATTGTCCTTATATGTGCTGAGATAAACAAG 2420365 31 100.0 34 ............................... CCCGCGTCGGTGAAGGTGGAAGGCGATGTATTCG 2420300 31 100.0 34 ............................... ATTGGCACATCGCCGTTAAGAATGGCTACGGCCG 2420235 31 100.0 35 ............................... CATGTTTTACCATCTCCGTCCCAAAGCCCTGACTG 2420169 31 100.0 37 ............................... CAGTTGTCACAATCGCAACATCACCAAATCCGCCTTG 2420101 31 100.0 35 ............................... ATATAGGTTAATCATTTTCCCCAACATCAAGAACG 2420035 31 100.0 34 ............................... TATGGGTCACTCTAGAGTCTCAAAGTCAGGGCTG 2419970 31 100.0 35 ............................... ATACTTCAGTCTCATTGGCTCAAGCACTCGCCACG 2419904 31 100.0 34 ............................... AGTTGGGCGTAAACCCGAGGAATCCGAAAAGGGG 2419839 31 100.0 33 ............................... TATAATCCATACTCGCCCAAGTCGCACTCCACG 2419775 31 100.0 35 ............................... CTGACACGAACGCAGTGACTCGGCGAGTGCTGTGG 2419709 31 100.0 35 ............................... CCAAATGTGCGCTATGAAATCCACCGGAACGGCAG 2419643 31 100.0 34 ............................... TCGATGGGTGTCACGTGCTCTATCAGCATACGTG 2419578 31 100.0 36 ............................... CAACACATGGATCCCGGTCTCCCCGAGGGCGCGGGG 2419511 31 100.0 36 ............................... CCCATATGAATGGAGACGACATATATCCTGATAGAG 2419444 31 100.0 36 ............................... TATGATAGCGATATTAAAACAGTCGGTGATTTAATG 2419377 31 100.0 34 ............................... AACATTCTAATGGTGTTTTCCATGATATACATCG 2419312 31 100.0 34 ............................... ATACATGTCCATCCAGTCCGAAGTATTCCGGGCG 2419247 31 100.0 36 ............................... TATAATCCATACTCGCCCAAGTCGCACTCCACACCG 2419180 31 100.0 35 ............................... TATGTGTCACTCTAAAGCCCCCTTAAGTTTACGCG 2419114 31 100.0 36 ............................... AGTAGTGCCGGCCGCAGCAGATACAAGCGCCCGCAG 2419047 31 100.0 35 ............................... AATGGAACTCGCTGCGGAAAAATGGGTGGGAACCG 2418981 31 100.0 35 ............................... TTGTGGGGCGTTGACTGATTTCTCGGGTTTCGGCG 2418915 31 100.0 35 ............................... GAGTTCTCCGGCCCGTGCGAGACCGCTGACGATTG 2418849 31 100.0 35 ............................... CCTGCAGGGCGTCCCGAAGACCGTGTCGTCGGGCG 2418783 31 100.0 35 ............................... CTCCTCCTCGCGCTCCTCCTGACCCCGGCCGCCCG 2418717 31 100.0 35 ............................... AGGGGTTGGTTGTTCGGTCATTTTTTCACCTACAG 2418651 31 100.0 35 ............................... ACGTTCCGGCTGCCCGTCGCCTATGACCCGGCCGG 2418585 31 100.0 35 ............................... GACCTCTACCTCGGCGATGACCAATATACGGCGAG 2418519 31 93.5 35 .........AA.................... CTCATGCGCGGCGGCACCGAGCGGGACTACCTCTG 2418453 31 93.5 34 .........AC.................... TCAAACATAATCTTATCAAATATATCTGTCATTG 2418388 31 83.9 0 .........AC...............T.TT. | ========== ====== ====== ====== =============================== ====================================== ================== 75 31 99.6 35 TCACACCCCGTGCGGGTGTGTGGATTGAAAT # Left flank : ATTATGGACAGAGAGTCCAGAACTCCGTATTTGAGTGCCTCGTGGATCCGGCTCAGTTCGCACAGCTTAAACATTCTTTATGTGAGATCATAGATGAGGATAAAGATAGTCTGAGGTTTTATTACCTGGGTAAGAACTGGAAAAACCGGGTGGAGCACTTCGGTACCAAAAAAGGCTACGATCCAGAAGGTTTATTAGTGCTATGATCTCTGCGAACCTATAGTGATCATTGTTTTATTAATGGGTTCGCAGAGAGAATCGATTGATAATAGTTATTTTTTGTGGTTGGAGTTTCTCTTCGGGTCTTAGAATATAACCCTCAGAAAAATGGATATATAACAGGGAAATTTGATCCACACAACACAGTGTTTTTCAAATAATGTTATATGGGCCGCAATGGCCGAAATTAATATTTAGTGCCCGGCGTGTAAATGATATTAGTCCATATCGGTGCCGATCTTCTTTCGTATGATCATAACGCGATCTGGATTCATTTGCGG # Right flank : CCTATAGGGACGTGGATCCGGGGATCTTGTACGTATTATAGGGAGATCAGGATTATAGGACTGAAGATGTTGGAAAATATGAATGAACCGAAAGAGTAATTGGAGAAATTGGTGGAGTAAAAGTAGAATAATCCGTCTTTTTCTCTTCTCTTTCTCCTATATTCTCCTCCTTTTCTCCCGGTGATGGTCAATTCGGTTCAAGATGTGTATGGCCCCTGGGATCGCTTGTTAGCCCTTGGCTTTGTCAGGGGAGAGGGATTGATCAATAGCGTGGGCTCTCCGTCGTGAGGGAGGGAAAGGTTCACCCTCTCCATCCATGGTGCGAGGCCACGCGGGATCGATCCCATCTCCAGCGTGGGGAGTTGTCCTCTCTGGAGGGTGCACCGCGCCTTCTTACTCTCTCTGTATCATCCCCGCGCCGCCTGAAGGTTAGGACGGCCCGAAACTGTATGGACAGATACATAACTGTCATGACAGTGGAATCAGAGATTATAATGGTT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCACACCCCGTGCGGGTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //