Array 1 27654-27156 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JABTZO010000021.1 Streptococcus suis strain HNAY39 NODE_21_length_27982_cov_169.991, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     27653	    36	 100.0	    30	....................................	GCGATCAACAATCTACTCAATCCAACGCAC	
     27587	    36	 100.0	    30	....................................	TAAGACCGTTGATTTGCAGAGCGGTATTGA	
     27521	    36	 100.0	    30	....................................	AGGTGAGTCAATACTATCATGACCGCTATA	
     27455	    36	 100.0	    30	....................................	CAATCCGCAATTTCTCTTTACGAGCTTCGA	
     27389	    36	 100.0	    30	....................................	TTCAACGTAGGGACTCGGAAGCTGGTCGGC	
     27323	    36	 100.0	    30	....................................	AACTACTCAATTAATCGGAAACTTAAAAAT	
     27257	    36	  97.2	    30	...........................C........	GACCCCGTCTTTTTCTTTCTTCATTCCATA	
     27191	    36	  94.4	     0	..........C...T.....................	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	  99.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTTCAAAAC	                              	       

# Left flank :   TCAGTCGAAGCATATATTGGATAACAGATTCTGAAATAGTAAATTGGTTTGACAAGTTCTTGATAGACTGACCACTTTGGCGTAGTTCATAGATTTCGAGTTTGTCTTCATAGCTCAATTTCATAAAAATAGCACCCCAAATGTTAGATTTTTTCTGTCTAACTTTTGGGGTGCAGTTCATATGTTTTGGATAAAGACTATTTCTTACTATCGGAAAATATGGTAAAATAAATACATACAGTACAAATATTAGAAACTATTCGAAACTGAAGTCTGGCTGAGACGAATGGCGCGATTACGAGATTTTGTGACAAAAAATAGTCTACGA
# Right flank :  TGTTAAAAGACAAATTGATAGGGTAGTTAGTTTTAGAGTTGTGTTGCTCTAAAAAGTTCTTTTAATTCTTAAAAGCAATGTAGCAAAAATATTTAAGTGTCAAAAAGAAAGGGGATTGTAGATGGATTCAAAATCAATTATTATAACTTCTGGTTATAACAGTAGTAGTGAATATTTTAACTTTAATCGTCAAAATAATTACCAAAATAATTGAAAGTAAAAAGTATAGATGAATTTAATTTAAGCTTCATTTTTTTAGGATGAAAACTAGTGCACAGACAAGTAATTCTCTACCATAAACTTTCAAAGTTAAAATGATGATTAACAACATCCAATTTTCCTCCAAGATTTCTAACTGACTCTTGTCCCACCCCCTTTTCCATGCTATACTAAATATTATCGTTTTACTTCAAAGGAGACAAAGATGACAAACCTAAAAGAGCAGGTTGGGATTAAGGCGGCGGAATTTGTGACGGACGGGATGATTGTTGGGCTGGGAA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTTCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.20,-2.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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