Array 1 25946-33714 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVUS010000035.1 Delftia sp. S66 NODE_35_length_71209_cov_29.898957, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 25946 32 100.0 35 ................................ CACTTGGTTTCGAGGTGTTCCATGCTATGGAGCGA 26013 32 100.0 35 ................................ CTCCCGAGAATCTGGGTGCTTTTCTGGACCTGCCA 26080 32 100.0 35 ................................ TCGCATTCGCTTTTGTCGTCTTTATCATCCTTGGG 26147 32 100.0 34 ................................ TTCCAACGGGCAGCCGCCCAACCTACCACCCAGG 26213 32 100.0 35 ................................ TGCGCAGCCATGGCGGCGGTGGTGCGCTCCATGTC 26280 32 100.0 33 ................................ ATGAAAACGATACCGGCAGCAACACGCGCAGCC 26345 32 100.0 34 ................................ GCTCTCCAGTGTAGCCAGCAGCCACTTGCCGTAG 26411 32 100.0 35 ................................ TTTGCCGGTGGCGCGAACATCGACTACGCGCTCAA 26478 32 100.0 35 ................................ AGCTCCTGCTTGATCGGCGTGAGGTGCCGCTGCAG 26545 32 100.0 34 ................................ AGTGAGACTGCGGATACCAGCACCCACAGTCTTG 26611 32 100.0 36 ................................ ATTGGTATGCGGCCAATGGAGGGGCGATTGTATGTG 26679 32 100.0 34 ................................ CCCGCGCCGACATTGCGGATGTGCCACTCCCCGT 26745 32 100.0 33 ................................ ATCAGGCCCCAGATGACGACACCAGCGGCCATG 26810 32 100.0 35 ................................ CGCAGCCATGGCGCCAGTGGCAGCAGTGGCCAGGA 26877 32 100.0 34 ................................ TGGGCCAGCCTGGCCAAGTTCGACCAGTTCGGGC 26943 32 100.0 34 ................................ TCCTGTCCTGCCTGCACGTGCCTTCCTGCCTGCC 27009 32 100.0 33 ................................ ATGCAGAGGGTGCGCACAGCGTTATGTGCGCTC 27074 32 100.0 35 ................................ GCATTGCCGAGGTCCAGCATGCGCGCGCTGGCAGC 27141 32 100.0 35 ................................ GCTCCGGTGCCAACTGTTGAGACCCTGTTCCCCAC 27208 32 100.0 34 ................................ ATCGCGCGCAGGGCGCCCGTGTCGCCAACCGGTG 27274 32 100.0 34 ................................ CGTAACGCTGTTGTGTGGACCGAATCCGCGCTGC 27340 32 100.0 34 ................................ ACCACGGCAGGGCCCTTCATGACCAGGGCGATGC 27406 32 100.0 31 ................................ TGCAACATGGCGACGTGGCGGCAGCTGGGGT 27469 32 100.0 34 ................................ CCCCAGCTATCGAGCTGGGTCTTGTTGGCTCGCC 27535 32 100.0 33 ................................ CCGCGATTGTCGCTGGTGCCATCAGCACGGCAC 27600 32 100.0 34 ................................ CCGGTGTGCCTGGTTTGTCGCTGCCGTGTCGTTG 27666 32 100.0 33 ................................ GTCATCGAAGACCTGGGCAAGGCCGTGCTGATC 27731 32 100.0 36 ................................ ACCGACAAGCAGGGGCCAGTGGTTGTCCAGATCCGG 27799 32 100.0 33 ................................ GCCGTGCGATGGAGAAGGCCGGAACCTTGGGCA 27864 32 100.0 33 ................................ GCCTTGCGCTCCGCGATCACAGCAGCCGAGGGC 27929 32 100.0 35 ................................ AGATGCTCCTTTATGCCGCCGATGCCGTGCCGCTG 27996 32 100.0 33 ................................ ACCGCTACGGGCCTTTTTCATTGGCCTGCGGGC 28061 32 100.0 34 ................................ TCCGTGAAGTTCGGCCTTGACCCGGACCTGCAGC 28127 32 100.0 35 ................................ GACAGGAGTTCACACGCGATGCCGCCATGCTGGGC 28194 32 100.0 33 ................................ GCAAATCCGCACTGCATATGTGCGCAGCAAAGC 28259 32 100.0 35 ................................ AGCGCGTCCATTTCGTCCATCTTTCGGATTGCCCA 28326 32 100.0 34 ................................ AGTGAGCAGCGCATCGACCTTGGCACGGGTCTCC 28392 32 100.0 34 ................................ TTCCTTGGCCGAGCTTTCGCACGCCCGCGCCAGC 28458 32 100.0 34 ................................ CACTCCTTCACCGCGTGAGCGTTGGGAAGCCAGT 28524 32 100.0 35 ................................ TGCCCTGGTGGCATCGCGCACGACTGCTGCGCATG 28591 32 100.0 34 ................................ ATCTATCCCTAGCCCGCTGCACGCTCCGTCGCGT 28657 32 100.0 34 ................................ GGCTGAGGAGCTTGCGGAGCTGCAGCGTCAGCGC 28723 32 100.0 34 ................................ AACCCCAGCACGAACGGGATCTCGGCATTGGCGT 28789 32 100.0 35 ................................ GTTTGCAGGCACCGCATTATTCCCGGTCGCGCCCG 28856 32 100.0 33 ................................ GCATTGGGCATCCTCCATAGGGTTCAGCGGCAC 28921 32 100.0 33 ................................ TTCCCACTGGACACGCCCGTGCTCGTCACAGAC 28986 32 100.0 34 ................................ TGGCAGCTCGGCCACGTCGCGCGCGCTCAAGACC 29052 32 100.0 34 ................................ CCGCTGATCCCGCAAAGGAGGCCACCCCATGCCC 29118 32 100.0 33 ................................ GGCGGCCTCGATGTGGGCAGGAATGATGATGGC 29183 32 100.0 34 ................................ GGCGGCAATCGCTCCACTGTCGGGGCGATAGGCG 29249 32 100.0 34 ................................ GTCGCCATCGTCGGCCAGCCACTTGTCGCGGATG 29315 32 100.0 34 ................................ CAGACCACCAGGGTATCGCCCTGCACAAGACTGG 29381 32 100.0 36 ................................ ACATTTCAAGTGCTCGGCGCGGTGGCTCAGTTGGAG 29449 32 100.0 34 ................................ AGCTCGCCACGGTAGTCGCAGTCGATGATGCCCA 29515 32 100.0 35 ................................ TGCGCATCCCACGCATTGAATTCCGTGGGAACATA 29582 32 100.0 36 ................................ TACGAGTGCTGCGTGCTCAACGAGTGCGGCCGCCTG 29650 32 100.0 33 ................................ AATCCCGCGTGCAGGCACTGCAACGGCCAGGGC 29715 32 100.0 35 ................................ GTCCAGGCGCACCAGGAACCCGGCGTTGAGCGTCT 29782 32 100.0 33 ................................ ATCGAAATCCTGACCACCGTGGTGCGTGAGATT 29847 32 100.0 34 ................................ TCCGACGTCGTCGACCTGCGATACCGCAGCTGCA 29913 32 100.0 33 ................................ ATCCCGCGCCTGAACGCCACCGTCCTGCCCGAC 29978 32 100.0 35 ................................ CCCCAGCGTGCCCAGCGGGCGCACACCGGCTCGTA 30045 32 100.0 33 ................................ CACTCAGACACGCGAGATGAGGGGACTCCTCGT 30110 32 100.0 35 ................................ GCAGACGGTGAGAAGTGGTCAAACCGGTGGACTAA 30177 32 100.0 34 ................................ TTCGATGCCATGTCAATTACAAGCGGTGGCATTG 30243 32 100.0 33 ................................ GCTTGGTGTCGCACGTCGCCGCGGAGCGTGTGC 30308 32 100.0 33 ................................ GTTTGATTCCCGGGACAAATACTGTTGCGCCGC 30373 32 100.0 34 ................................ GATTTCATGGTCCCAGGGCAGGAAGAGCTGGCAG 30439 32 100.0 34 ................................ TTTAGACCAGCCGCTCAGGTGATCTGCAAAAGCG 30505 32 100.0 35 ................................ AATGCCTCTGATCACGGGGGCAATGTGCATTAATG 30572 32 100.0 34 ................................ TCTCGATATGTGAGGGTCAACAGGGTGTCGACAC 30638 32 100.0 34 ................................ AGGTGCCCCCATTGGGACTGGTGGTGGATCCGGG 30704 32 100.0 35 ................................ CTACGCGTTAATACAAACACATTCGCCGGTATTGC 30771 32 100.0 34 ................................ GTCGTCGCGGTGTGGCGCGCGCTTGTCGTGCCAG 30837 32 100.0 33 ................................ TACATCATCGTCGCGGCCCCGAGCGGCAGCCGC 30902 32 100.0 34 ................................ GATGAACCCAACTGGGAGACAGGGAAGAATGTGT 30968 32 100.0 35 ................................ GTCTTGGTGCTGGTCTTGAAGACCCCAAGCACCAC 31035 32 100.0 33 ................................ GCCCATGGCGCCCCAGGACGAGGCCCAGGCCCG 31100 32 100.0 34 ................................ GTTTCTGGCCTGCGGGCCGCAAGGAGGCCTCATG 31166 32 100.0 33 ................................ GTCTGGATCCCGGTTGCCGCCGAGACCAGACTC 31231 32 100.0 32 ................................ TACGCAAACGCGGACTTCGGACCGGCTGACAG 31295 32 100.0 34 ................................ GGGTGCTCGATGACGCCACCCCAGTTGCGCACAG 31361 32 100.0 34 ................................ AGCGTCTTGACGCTGCCCGTCTTGGTGCCCGCCA 31427 32 100.0 35 ................................ CGAGTCTTCCCGGCATCAATGACGTTGCCGGATAC 31494 32 100.0 36 ................................ TGCTGCCCGACCGTGTGGGCTGGGGAGGCTAAAGAT 31562 32 100.0 30 ................................ TTACGGTAGCTTGTCTGTGCTGCACATGAC 31624 32 100.0 34 ................................ GGAGAGTGGGTGCTCCAGCGTGCTGACCTTCGCA 31690 32 100.0 34 ................................ AAAAAATATCCAAGTGCCACCAAAGTCGAATGCC 31756 32 100.0 35 ................................ TCTTCTTCCGGGGCCACGACATGCGATCCCACGGT 31823 32 100.0 34 ................................ CAGCGGCACCGATGCGGACGCCATCCGCGCCGAT 31889 32 100.0 35 ................................ TCCAGGAACGGGCCGAGCGATGCGATGATCTTTTG 31956 32 100.0 33 ................................ GACTTCTCGATCAGCACCCTGTATTACGTCCCG 32021 32 96.9 33 ..............................C. CTCCATGGACTTGGTCATGCGCTCGCGGATGAC 32086 32 100.0 33 ................................ ACCTGGGCCCTGGCTGTCACGTCCAATGGCCTG 32151 32 100.0 33 ................................ GTGCACGGCGCGGCGGTAGTGCAAGAGCTTGGC 32216 32 100.0 35 ................................ ATATACACGCGAACAGGATATTGGGATGCGTTTAT 32283 32 100.0 35 ................................ GGATCGAGGTCCCAGATGATGTGTGGGCTGCGCGA 32350 32 100.0 33 ................................ TTCTTCACAGCGTTCCTCCAGCAGAAGCGGCAA 32415 32 100.0 36 ................................ ATCCTTGCGCAGGGTGAAGTCGATCATTGGCGCCCG 32483 32 100.0 33 ................................ AGCTTGCACGCGATCTTGTGGGGCTGGTCCAGG 32548 32 100.0 35 ................................ TTCGGAGGGAGGGCTGACGCATGAAGATCGGTGTC 32615 32 100.0 36 ................................ CTCGCTTTCGCGGGCGCTGCCGGCAAGTCCATTGCT 32683 32 100.0 34 ................................ CGCAGGCAGTGCTTGCATGTCACCTTGTCCTTGT 32749 32 100.0 35 ................................ TGAACAGGCCCGATACCTGCTCAAGTGCGTCGCCA 32816 32 100.0 35 ................................ ACCCGCTTTCCCGTCGAATATCAGGCGGGCCTCAT 32883 32 100.0 34 ................................ AACGAGAGGACCACCCGAGACAGGACGAAGGCCA 32949 32 100.0 34 ................................ CCCGCCTCGTATCTCATGGCGTTGTCCCCCAGAA 33015 32 100.0 36 ................................ CGTGCATGCCCCAGCCGGGGCGTGCGTTGCTGACGA 33083 32 100.0 33 ................................ TGCCTGCTGGCCTGGGCCAAGCGGCACGAGCAG 33148 32 100.0 34 ................................ TTCCGCATCAGCCGCTGGCAGCTGCAGGTCGGGC 33214 32 100.0 33 ................................ AGCATGACCCCTGCAGGCATGCAGAAGTGGTTG 33279 32 100.0 35 ................................ TTCAGGGGTGTATCGACGCGTAGGGTTAGCATCAC 33346 32 100.0 36 ................................ AAGGAATGGGTCCGTCGCATGAAACGTGCGCTCGGC 33414 32 96.9 34 .........G...................... ATGGGGCAGGGGGCCTGGATGAGCCTGGCCGTGG 33480 32 100.0 36 ................................ GATAAGGAGGCCTGTGCCTTCGGGCTGGAGCGCCTG 33548 32 96.9 35 ............A................... AAGCAGGAGAGGGAGGTTGCCAACGACTGGCATTC 33615 32 100.0 36 ................................ CGCGCCAGCCAGGGCATCACCAAGGCCCTGACGCTC 33683 32 96.9 0 ................C............... | ========== ====== ====== ====== ================================ ==================================== ================== 118 32 99.9 34 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : CCGGCGATGAGAAATGAGGTGTGCCGATGATGGTCCTGGTGAGCTATGACGTCCGTACCCAGGACCCGGATGGTGCCCGCCGCCTGCGGCGCATCGCCAAGGCCTGCCGGGACTTCGGCCAGCGCGCGCAATACTCCGTCTTCGAAATAGAAGTGGACGCCGCGCAATGGGTCGCCCTCAAGGCGCGGCTGATGCAAATCATCGACCCCGCCCAGGACAGCCTCAGGTTCTACTACCTGGGCCAACACTGGCGCAGCAAGGTCGAACACATAGGCGCAAAGCCCGTGCTGGACCTCGACGCCCCCCTCGTCTTCTGAGCCTCCGCGCGAACCCCAAGTGACCGCCGCCTGCCCTTGAGGTTCGCAGCCGCGCAAGCTGTTGTTTTCAAAAGGGGGTGGGCGAGCGAATGGCTGAACGCCGATCCTGCAGCATGACAGCGCCGTATGGTTCGCGGAAGCCTGGCTTTTTTCATAGCGGTGAAATTGCTCTATAAGTACCCC # Right flank : CCCCTGCCGCCACAGCAAGCGCCCCACGCATTTGAAACGAAGCGCCTGACTCATTCCTCGCCGCGCAGACCGCTATTGAGAGAGAGCCCACCCACTGCCTGCAGCAGGTACCCGCGTGCCTCATCCAGCGAGGGACCTGCATGCCCATCGATCCGCCGGATATAGGGAGATGTGAGCACAGCCATGGCATTGCCATCAGGCCCGAGGATGGGGCAGGAGATGTCCACCACGCCATAGGACTGCAGGCTTTCGCTCTGCCTGTAGCCCGTGCTGCGTATCTGTTCCAGCATGTCGTGCAGCTGTGCCTCGGGCAGATGTACCTCGCCTTCCAAAGGCGTGTGCTCGGCCAGCATCTGCGTGCGGCGTTCGGGTGTCTGGCAGGCCAGCAGCACATGGCCTGACCCGGTGTCCAGCAGCCCGACGCGTGCGCCCAGCCTGATTGACAGGCCCCAGTTCCCGGGGCCGGGGACCTGGGCCACGATCAGGACATTGCCACGGTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //