Array 1 6461-6029 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LVJM01000010.1 Streptococcus sp. CCUG 49591 contig_18, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      6460	    36	 100.0	    30	....................................	CCCGTCTTTTGTCCGTTGACATTGTGTACC	
      6394	    36	 100.0	    30	....................................	TCATTTCTACCCCTTCAACTTCAGTAGCTG	
      6328	    36	 100.0	    30	....................................	TACCGGAAACGGACACGGCATAGGTAATAG	
      6262	    36	 100.0	    30	....................................	ACACGATTGCGGTCGTGATTTAAGCACATA	
      6196	    36	 100.0	    30	....................................	GCTATCAAACGGCTTGATTGTGGAGCGCAG	
      6130	    36	 100.0	    30	....................................	TTCATCTTCTCAGTTTTCCGAAGACGTGAC	
      6064	    36	  97.2	     0	..........................C.........	|                             	
==========	======	======	======	====================================	==============================	==================
         7	    36	  99.6	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   ATCAACTCAATGATAAACCAGAAGTCAAATCCATGATTGAAAAGTTGGTAGCCACGATTACAGAATTATTGGCATTTGAGTGTTTAGAAAACGAGTTAGACCTAGAGTATGATGAAATTACCATTCTAGAGTTAATCGATGCACTTGGTGTCAAAGTTGAAACCTTGAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTTTCTAAAAAGAAACTCCTTGTTTTCATCAATGCATCTGCCTATCTATCAAAGGATGAGTTAGTAAATTTGATAGAGTATATCCAACTCAATCAACTAAAAGTTTTATTTGTCGAACCTCGAAAAGTCTATGATTTCCCGCAGTATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAATCATTGGAACCTGACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG
# Right flank :  ACATTAAAAGCTACTCATTTTCTAAGTAGCTTTTTTCTTATTCAAGTTTACATATTATACTCTTCGAAAATCTCTTCAAACCACGTTAGCTTCACCTTGCCGTATATATGTTACTGACTTCGTCAGTTCTATCTACAACCTCAAAGCAGTGCTTTGAGCAACCTACTGCTAGTTTCCTAGTTTGCTCTTTGATTTTCATTGAGTATAAAACAAAAAAGATAAGGTTCGAAATGCCTTATCTTTTTTCATTACACAAATTTTCATCCCATTCCCTTGTAGAGAAGCAAGACTGCCAATCCTACGAATAACACTAACGCTACCAGTCTCTGACTAGCGCTATACATCCGTCTTTCTCCTTGAACTGGAAAGATAATTGCTAGAAATGCTCCACCAACTGCTCCCCCGATATGACCTGCTAGGCTGATTCCTGGAATCAGAACACTTCCAATAATGTTAACCACAAAAAGTGTCAGATAATATTGCCCTAGCTGTTGGATATA

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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