Array 1 67472-65307 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSKW010000014.1 Raoultella terrigena isolate 18095_SP04_F5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 67471 29 100.0 32 ............................. CCATTGATAGAATATATCGAGAAATACTACGG 67410 29 100.0 32 ............................. GCGCGATTGCTTCGGTTAAGGACAGTAACCTG 67349 29 100.0 32 ............................. CTATTTACCTGAGTAGTAATAATTGCTGTCAA 67288 29 100.0 32 ............................. CCCGCGTTATGGTTTTAGTGATCGCTTCGGAT 67227 29 100.0 32 ............................. ACAATTGGTCTTCACAAAACTGCTGCTGGTGT 67166 29 100.0 32 ............................. CATCAGCAATCTGGTCTGCCGCGATGACGGCA 67105 29 100.0 32 ............................. CATCCAGCTGTCGTCCTCCCAGACCTGCTGCA 67044 29 100.0 32 ............................. TGCCTGCCCTTCATGGTGTGAATGCTGTCGAT 66983 29 100.0 32 ............................. TACGAACGTGCCGCCGAATTCGACGGCTGTCT 66922 29 100.0 32 ............................. CGATGCCGTCCGGCAGAGTGTAGGTCGCAGGT 66861 29 100.0 32 ............................. CCAGGTATTCTTCTCGGGTTTGTGATTGAGCA 66800 29 100.0 32 ............................. CCTGTGAACTATAAACGGACTGGCCACGCTAT 66739 29 100.0 32 ............................. CGCCGGAACCGCTGACTCAGTGCAACGGGTAA 66678 29 100.0 32 ............................. GCGTCTGGTCCCCGATTGTTGAGGGTCGGATT 66617 29 100.0 32 ............................. GCGCTATTGATCGGTAGTAGATCCTGATGTCG 66556 29 100.0 32 ............................. GAAAACCATAATGAATAACAGCCTGATCGCCA 66495 29 100.0 32 ............................. CAGTACGAAAAGGCTAGAACTGATGCGCAGTG 66434 29 100.0 32 ............................. AATTTTGAGACGATAGCATTTTGACGCTTGGC 66373 29 100.0 32 ............................. CGGCCAACGTGGTCGAAGTTACCCGCAAGATT 66312 29 100.0 32 ............................. TAGTCCTGTGGCGTGCCTTTGCCCGCCGAGGT 66251 29 100.0 32 ............................. TAAAAACTCTAATTTCTCAGTCTGGTGGTGAT 66190 29 100.0 32 ............................. CACATGCTGTACGCCGGCATACCGCTGAAAGT 66129 29 100.0 32 ............................. TTTTCTCTTTTCGGCCGTAAAAATGAAGTGAA 66068 29 100.0 32 ............................. GGATACGTGTTCCTCTTTTTATGGAGAATGCG 66007 29 100.0 32 ............................. CCACTAACGGGTTAACGCTGCGGCTGGATTCA 65946 29 100.0 32 ............................. TGCTCCCGGTTTTACCTGACAGCTGGAAAATG 65885 29 100.0 32 ............................. AGTGCCGCACCGTCAACGAGTGGGATAGCCAG 65824 29 100.0 32 ............................. CCCGGTTAATGACATACGACGCAATAATCGTG 65763 29 96.6 32 .............T............... CATTTTGCAGTCCGGGGAACTCTTCGATGTTA 65702 29 96.6 32 ........T.................... AGATGGAAGAAGTGGGGCCAAAGGTGCCGCTC 65641 29 100.0 32 ............................. CGTCCATAGGTCAGGGAGGTGTGCAGGTAGCG 65580 29 96.6 32 ...........A................. GTCGATCCAGTCGCTCGCGTCAGCGCTGCCAG 65519 29 100.0 32 ............................. GGGGTAATGTGTCTTCAGCATGAATATGGAGA 65458 29 100.0 32 ............................. CATCCAGTGCGATCTGCTCTTTTGCATGCTGG 65397 29 100.0 32 ............................. GTAAATCTGGTATTCACTGTCGTTATCACCAC 65336 29 100.0 0 ............................. | G [65315] ========== ====== ====== ====== ============================= ================================ ================== 36 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGTTGGCAGCAGGTGAAATACTCCCACCGCAACCAACCCCCGATATGCTGCCTCCGGCAATTCCTGAACCGAAACCTATTGGTGATTGCGGTCATAGAGGGGGTAGTGGATGAGTATGGTTGTCGTTGTGACGGAAAATGTCCCACCGCGATTACGAGGTCGACTTGCGATCTGGCTTCTGGAAATACGGGCTGGTGTTTACGTTGGTGATACTTCAAAACGTATCCGTGAAATGATCTGGCAACAAGTTACTCAACTTGGAGGCAGTGGGAATGTTGTAATGGCCTGGGCAACGAATACCGAATCTGGTTTTGAGTTTCAAACATGGGGAGAAAACCGCCGTATGCCGGTAGATCTAGACGGGCTTCGGTTGGTTTCATTTTTTCCTTTTGAAAATCAATAGAATAACGGTTCTTTAATAATGCGAAATTGTTACAATCAAGTTGGTAGAGTGTTGGTTAATGGAAAGGTTATTGAAAAATAACAATATATTTTTAGT # Right flank : GCTGATATCACCGAACTGGCGCAGAGCCTGAATCGTTCCCCGCAGCAGCAAAGCGCCAGCTAGCCGCGCTTATCGGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACCTTGACGACGTCGCGGCTGCGCCGCTCGATGCGGCCGGGGAGCGCTTTGTCGATATGCTGCTGATTATCCAGCTGCACGCTGTGCCAGCTGGAGCCGTCAGGGAAGGCGGGGGATTTTGCCCGCTGCTGGAAACCATCTTTCTTACCGAGCGACCAGTTGGTGGCCTCCACCGACAGCACCGGGATCCCGGCGCTATCAAAAACGCTGGCGTCGTTACAGCAGCCGGTGCCCTGCGGATAGTCGCGGTTCAGCCCCGGGTTGCTGAAGGCGGCAACGCCTTTGCTACGCGCGATGGCCAGCGCCCGGTCGCGGGTCAGCTTGCGAATCGCCGCCGGCGTGCTGCGGCCGCTATTAAAATAGAGCTTGTCGCCGACCACCAGATTATCGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //