Array 1 761284-761059 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUMR010000001.1 Myxococcus sp. CA040A NODE_1_length_1785138_cov_22.8264, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================= ================== 761283 24 100.0 42 ........................ GCCAAGCCCGCGGAAGCCGAGGGCGCCGAGCCCGCCGCCCCG 761217 24 95.8 45 ....................G... CCGAAGCCGGAGGCTCCTCCGCCCGGCGCCGAAGCCCCCGCGCCC 761148 24 100.0 42 ........................ GCCAAGCCGCCCGAGGCGGAGGGCGCCGAACCCGCCGCTCCC 761082 24 95.8 0 ........T............... | ========== ====== ====== ====== ======================== ============================================= ================== 4 24 97.9 43 AAGAAGCGCGGCCGTCCGCCCAAG # Left flank : ACGTGAAGAGCGTCTTCGCCTTCCTGCGCTCGGACGGTGACAAGGCCGACCTGGACTGGAAGCAGCGCGCTCGCACCAACCTGGACCGGATGACCCAGGGCGGCATCCTGGGACTGGCCGAGGTCGTCAAGGATCTCCAGATCCTCAGCGAGCTGCGGCCCCTGCCCACCAAGGAGCGCGAGCTGTACGACAACGCCCGGCACCTGCTGGTGTCGGAGGTCGCCGCCGCGCTCGGGACCGCCGAGGTCAACGCCGAGGACGCCATCGACATCGTCCTCTTCCCGCCCGGTCGCGAGCGCCCCAAGCGCACCGCCGCCGAGTTCGCGCGCGGAGAAGAAGACGACCTGGGTCTGGATGGCGACCTGCTGGGGCTCGACGGAGACCTGGACCTGCCCTCCGACGAGGAGCCGCAGGCCGAGGCCTCCGAGTCCGAGGAAGAGACCTCCTCCGAGGAAGAGGGCGAGGAGTCCGAGGAGAAGTCCTCCGACGAAGACGCGCCC # Right flank : GCGAAGCCCGCCGAGGGTGGCGAGGACTGACAGTCGACACCCGAGTCCCGGGGGCGGTGCTCATGGCCCCCTCCCGAGGGCCCTTTGCCCCGAGGTGACGCCCCGTGATTCGCGTCGTGACGCTGGACCCCTTCGACGACAAGCAGCTCGCCAAGCTCAACCGCACGCTCTACACGGCGTTCGGCGTGGGCAGCGAGCACTCCGGCACCGCGGAGATTCCTCCCGGGCTCGGCGAGCCGCTCGACGCCGAGAAGCTGCTGGACCAGGTGAAGGGCATTCGCGCCTACCAGGATGACAAGGTGCTGCTGCTCACCTCGCGCAAGCTGAAGGAGCGCGAGCTGCCCAGCGGCGTGGCGCCCACCCCGGGCTTCGCGCGCCAGGGCAAGGACCGCGCCGTCATCACCCTGCTGCCCCACAAGGATTTGGAGGTCGGCTTCAAGCCCGTGGCCCGCCACGCGCTCCACCAGCTCGGCCACCTCTGGGAGCTGCACCACTGCCTG # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAGAAGCGCGGCCGTCCGCCCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [25.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 132802-135164 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUMR010000003.1 Myxococcus sp. CA040A NODE_3_length_1260733_cov_24.6893, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================================================== ================== 132802 37 100.0 34 ..................................... CCGACCAACGCGTTGATGGCGACCTTCGCCCACG 132873 37 100.0 46 ..................................... GCGACACCATCTTCCCCGCCAGCGCCGGGTCATCGTCCAGCCCGTG 132956 37 100.0 34 ..................................... CTCGCGTCGCGGGTGACGGTTGAGGCGCCGCCCC 133027 37 100.0 32 ..................................... TTCCGCGCGGCGGAGAGCGCCGGCCTGGAGTC 133096 37 100.0 35 ..................................... CAGCGGCGGTGGTGGTATTCCGGACCCGTCTCGCA 133168 37 100.0 32 ..................................... ATGAACGCCGTACGCTCTGGTGCACGGACTGG 133237 37 100.0 32 ..................................... GAGTGCACACCGCGCGTTGTCGAGGCTCACTC 133306 37 100.0 34 ..................................... CGTGCCCGTCTCAAACCCCGACGAGTGCGGCTTG 133377 37 100.0 35 ..................................... TCGGTGTCGGCCTGGAGCTTCGCCAACTCGGCCGC 133449 37 100.0 33 ..................................... AGGGACGTATGGCTCGCGAACCGTCACCTGGGG 133519 37 100.0 32 ..................................... ACCTACATGCGATGGGACGGGGTGAGGTGGCA 133588 37 100.0 36 ..................................... ACGGTGGATGAGTGGCGCGCGAAGGCCGGCCTCCCA 133661 37 100.0 34 ..................................... CTTGAGGTACGACCCCGTGCGCCAGAGGCGGTCG 133732 37 100.0 33 ..................................... AAGGCATCCGTTCCGCTTCGCAGCGGCGTAGAC 133802 37 100.0 38 ..................................... CAGGACGGCGCGCCCTTGGAGTTCTCCTTCCAGTCGAT 133877 37 100.0 33 ..................................... TTGTAAGGGTGTGCCCCGCCAAGCGCTAACGTG 133947 37 100.0 38 ..................................... CATGGGTTGGACGATGACCCGGCGCTGGCGGGGAAGAC 134022 37 100.0 34 ..................................... ACGCGGGGAGGTGTTGGTGTATGGGTCCGCGGAG 134093 37 100.0 33 ..................................... CTCGGCCATCGCCTGCAATGCCTCCCACGCGCA 134163 37 100.0 31 ..................................... CTGTCGGTGACGAGGCGGATGTAGGCGAGAA 134231 37 97.3 33 ..............T...................... TGGTACAGGCGTCCAGCACCACCACGCAGCGGC 134301 37 100.0 32 ..................................... TCATGGCTGTCATTGCTGCCCTGATGTTTGGT 134370 37 100.0 33 ..................................... TGGATGTCGCAGCCCTTGAAGATGGCCTGCGCG 134440 37 100.0 33 ..................................... GCCGGTGTGAAGAGGTACTCGGCATCCCGGGGT 134510 37 100.0 33 ..................................... CTCTTGGCCATTGCGTCCCGGCCACGCACGTCC 134580 37 94.6 32 ....T........G....................... TCCGAAATTTGGCGGTGCTGGGCTGACTGCTG 134649 37 97.3 32 .............G....................... ACAGCGCCGAGAGCACGGGCCTATGCGGTGCC 134718 37 91.9 34 ...............G.T..............A.... CAGAAGTAGTAGTCGACCGTCGACTTCGGGCCTT 134789 37 100.0 88 ..................................... TCCGCGAGGTAGCGGCCGAAGCCCTCGCACACCGTCGCTCCTCGCATGGGTTGAAACGGTCTGGTCTCGCTGGAAGGACGGCGTGACG 134914 37 97.3 34 ...............G..................... CTCATCCCCACGGGGATGACCCCGAACGGGACGA 134985 37 83.8 36 .C.......G.......AAG.............C... GAGGTGCCACCAGAGCGGGACGGTGACACTCAACTC 135058 37 97.3 33 ..T.................................. GTCGAGAAGGTCATCGCCGCGCTCAACGCGCGG 135128 37 91.9 0 ...A............T.A.................. | ========== ====== ====== ====== ===================================== ======================================================================================== ================== 33 37 98.5 36 GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Left flank : GGAGAAGCCCGCTCGGGCGTTCACGGACTACTCGGTGACGGTGGACACAGCGAAGCTGCCCGAGGGCATCGAGGTGATGGACCTGGCGGGATGAGCGACACCCGTGAGACGTGGGTAGCGCTGTCCGCCCTGCAGCACCTGCTGTTCTGCGAACGGCAGGCCGCGCTCATCCATGTCGAGCAGTTGTGGCGGGAGGATGTGAACACCGCGCTGGGTCGGCTGCTCCATGAGCGGGTGGACCTTCCCGGTCATGACGCCCGGCCGGGCCGCCGTGTGGCGCGGGCGGTTCGGCTGGGCTGCTCGCGGCTGCGACTCACGGGCCGCGCGGACCTGTGCTGGTGTGGGCTCCGTCGGAGGTTCGCGCTCTTTGAAATCACCAATAGTCTTCAGAGGTTGCGCGGGCTGGGGAGCCGCCGACTCGGGCTGGGTGACTCGAGTGGAGCCAGGTTCGCGCGAAGCGGCTGGATTCCCTTGGAGTTCTGGTAGCTTGGGAGGGCAGA # Right flank : CACCGTGGCGAACGGCGCGTCGTCCGGATGCTCCAACTCGTGGTGTCGGTCCGCGTACCCTTCAGTCAGCACCTTCATCGTGTATGTCCCATGGGGCAAGGATTCGAAGACGAAGCGACCTTGCTCATCCACGAGGGCCCTCACTTCGCCAGGCTCCGTCGGGCTGACCTTGTCCACGGCGCCCGGATGGGCTGGCCCTCCTTGTTCCTCGCCGTGCCGTTGAACGGGCCGAGGGAGTGGAACTCGATGTGGACCCCGGTCTCCGGGAACTCTTCTTCCAGCGTCACACTCGCGCTGCCTCGTTTGCGCGAGGTGCTCGCCGCTCACCCGGGGCCATGCCCTTGCCTCAGGAGTCCGTCCGCCTCCGCCCTCATCCTCCTGAGGGTTCGAGAGGTGGCCGGACTCCCGTGGCCTGCTCCGGCTGGAATCGTCCCGCTGGTCAGAGATTGGCGGCGAGCATATCGAGCAGCGCGCGGACCTCGAGCTGTGCCGTGCAGTCG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.10,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //