Array 1 43894-45998 **** Predicted by CRISPRDetect 2.4 *** >NZ_VYVF01000007.1 Corynebacterium amycolatum strain UMB9184 NODE_7_length_98420_cov_12.404942, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 43894 29 100.0 32 ............................. TGTTCACCCTCGACGGCTAAACCGCAGCCCCG 43955 29 100.0 32 ............................. TTCTCCGTAGTCTTGAGGTTGACCGGCTAGAC 44016 29 100.0 32 ............................. AAGTACAAGGTCGAAACACGAAAGAAGGAACA 44077 29 100.0 32 ............................. AAGTTGGCGTCCTTGCCGACCGTGCCGCCGAT 44138 29 100.0 32 ............................. TTCGGCTTTCCATATCGGTTTCCTGGTTTTCC 44199 29 100.0 32 ............................. AGGGAAGCAGGCGTTCGACGCGGCCTCGGCTA 44260 29 100.0 32 ............................. CCTATCGCGTCGAAGAAGGAACTGACGGCGCA 44321 29 100.0 32 ............................. TACCGTGAGTTCATAGCCTGTGGAGGGATACC 44382 29 100.0 32 ............................. TACCGTGAGTTCATAGCCTGTGGAGGGATACC 44443 29 100.0 32 ............................. ACCAGAAGAAGCCCGCCAACTACTCGACGGCA 44504 29 100.0 32 ............................. GAATACCACGAACACTGCCTAGTCAACGACGA 44565 29 100.0 32 ............................. TGGAAGAACTCAGACAGCAAGAGCAGCAGGAG 44626 29 96.6 34 .........T................... TTTGATGCGCAGTGGCAAGAAGCCGCCCCGTGCT 44689 29 100.0 32 ............................. AGAAGCGGTCAACGACAGGTTGGCGGGCACAT 44750 29 100.0 32 ............................. AAGCGCATCAGATTAATGAACAGGGCAAGCTT 44811 29 100.0 32 ............................. AGCTGAGTATAGCGTGACACTACACTAGAGAG 44872 29 100.0 32 ............................. AGCTGAGTATAGCGTGACACTACACTAGAGAG 44933 29 100.0 32 ............................. ATCTAACGCTACAACGCCACTGCGAATAACCT 44994 29 100.0 32 ............................. TTGTCAATGGGTGGATACAAGTCCATGACTCT 45055 29 100.0 32 ............................. AGTTGTTGGCCGTGTGCTCCCCGCCCTGGCTA 45116 29 100.0 32 ............................. TTCGATTTGTTATCTGTCTCAGACCACGGGAA 45177 29 100.0 32 ............................. ATGTCGAAGGCGGCGGCGGAGTTTATTTGTGA 45238 29 100.0 32 ............................. CGAAAATCGTGCCCATCTCAGACATGCTGGTG 45299 29 100.0 32 ............................. AAGTTCGCCGAGTTCCGTAAGTGGGCGGAAAA 45360 29 100.0 32 ............................. ATCGCGGAGAAAATCACCGAGTGGATCAACGG 45421 29 100.0 32 ............................. AACCCTGGGTCGTCTACCGCACTAACGGCAAG 45482 29 100.0 32 ............................. CTGTGCCCGGAAAGGCGCATGCCCCTCCAAGA 45543 29 100.0 32 ............................. AACTTGCACTGCTCTAGCCTCCTCGAAATAAG 45604 29 100.0 32 ............................. CTCGCCGGTGTACCACGCCGCCATATCAACGA 45665 29 96.6 32 ............C................ AGTCCCGCGCCAGCCCCTTTTCTTTTTTCGAG 45726 29 96.6 32 ............C................ ATAACGCTGCTTGAACGCCGCCCAGTACTGCG 45787 29 93.1 32 ............CG............... GTATAACCCCGCGCCGTTAAATCAGCAACAGC 45848 29 96.6 32 ............C................ CCCAGCCGGGAGGAACGGGTTCGGCCACACGT 45909 29 96.6 32 ............C................ ACCGTGCAGTCCCCGGCGGATAAGCCACGCCT 45970 29 89.7 0 ............C...........G...T | ========== ====== ====== ====== ============================= ================================== ================== 35 29 99.0 32 CTCTTCTCCGCATACGCGGAGGTATTTCC # Left flank : TTCATCGAAGGGGCATGTTGAAAGAGATGATTGGAGTATTAATGGAGATTCTCGAACCGTATCTGCCAGAAAGAGACGATGACCGGTTGATTGCGGGACGGGGCGACGAAGTGGCTGGGCATACACAGTATGGAAATCGACCCCAGTAACAGTAGGTGCGTCCCTTATGTTTTTGGTACTTACTGCATCTAATTTGCCGGAACATCTCCGAGGGTATCTAACTCGTTTCTTAGTTGAAGTTGATACTGGAGTTTTTGTCGGTAACGTGTCGAGACGCGTTCGTGATAATCTATGGGGCCGGTGTAGCCGAGCTATAGGGGAGGGACGTCTAACGATGATTAATAATGATCCCACCCGAGAGCAGGGGTTCGCCGTAAATACGATGGGGAGTAATCGCCGAGTGATTCAGGACTTCGATGGTCTGTTGCTGCCTGTGACCTTATCTGCCGAAACTCGCGGACTTGAAGAAACTTCTTCGTAAAAACCGCAGGTCGGGAACT # Right flank : TCAGGTACCAAGCGTCAAGCTCGCCACCTACCTTGTGGCTCAGCCTTAACCCCCTACCGCTTTCGCAGCACCAGCACCAGGTTCGACACCGCGAACTCACGTAGCCCCGGCACGTGAACCATCCACCAGGCCCACCACGGGTGGTAACGCGGAAACGCGGCCAGCAGTTCACAGTCGCCGGCCTCCGCGGCAGCGTGCGCCCACTTCAAACCTTCACCGCAACCGACCTTGAACAGGGACTCGCCAAAGTAGTTCTTCGGCCGCTTGCCGTGCTTCTTCTCATACATGCGCCGCGCGCGGTCGCCACCCAGGTAGTGCGTCATCCCCATCTCGTGACCACCGAATGGGCCGTACCAAATGGTGTAGGAGTAGACGACCAGCCCGCCCGGCTTGGTTACGCGCAGCATTTCCTCGCCCATCGTCCACGGCTCGGGCACGTGCTCGGCGACATTCGACGAGTAGGTGAGGTCAAAGGCGTCATCGCGAAATGGCAGCTCCAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCATACGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //