Array 1 1154-293 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDSB01000039.1 Marinifilum sp. JC120 scaffold_38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 1153 36 97.2 33 ....................T............... TTATCAGCCGATGTCTCATCACCATCAATAAGG 1084 36 100.0 33 .................................... TGTCTGGTTTCTCCATTAACTTCAAGAGTTTCT 1015 36 100.0 32 .................................... AGTACATTCTGGAATCATGCTTAACGCATACA 947 36 100.0 32 .................................... TGTTGACATCCAGCACATTTAGGGCCACCCAT 879 36 100.0 34 .................................... ACCATAACTTTTTACTAAATCGGCGGAACATATA 809 36 100.0 34 .................................... ACCATAACTTTTTACTAAATCGGCGGAACATATA 739 36 100.0 33 .................................... CCTTAACCGGCTATTCTTTTAAAAAATGTTGAA 670 36 100.0 31 .................................... TCCGGAATGGAAAGAGAAAAATTTTTCTCCA 603 36 100.0 33 .................................... AGATAAGAATTCCAAGTATAGAAGTAAATAAAA 534 36 100.0 33 .................................... TTTTAATCTAATAATATAATCAAAATTTATTTT 465 36 100.0 35 .................................... TTTGTTATATTTTCCCAATCAAGAAAGATGTAGAT 394 36 97.2 30 ...........T........................ ATAAAAATAGCAACTAAGGTTTTAGCCCAG 328 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================== ================== 13 36 99.6 33 GTTGAACGATTCCGCACAATGACAGCGGATTGAAAC # Left flank : TCGTCTTCATCAATAGTGTTTTGTAATTGTCCAAAAAGTTCCTGAGCCTGCCGAAGGGTTAGCCCGCAGATGACAGCGGATTTTTGTCTGGCGATGTTCCATTCATCAAGAATTTTCCAGATTTTGCGGCGAGTCTTGTTATTTGAGATGTCAAACGAGATGAAATACGGTGCCTTTTGCATAGCTGCCTCCTTTTGACTCAATAATCGCGTAAAGAGGTGATGGGTGCAGCTATCGTAAAATTACCAAGTAAAGTTTAATTTTCTGGTTTTATTGAGGAATGTTAATTTTTACGCGATTGCAGTTTTTTGAGGACAATCTTTTTTGAATTCTGGCACAGCTTTCTTTAAGTGTCTGAAAATATACATAAAGTATGTAGCCAGTTTTGGGCGTGTGATTAGTGCTGCGTGTAACCGGTAAGATAATTAGTGCTACTTGAAATGAGTGAAAAAGTGGGGTATATAAGCTATCAGTTTAACTGGGGATAAAAATGGGTACCT # Right flank : CTTTTCTAAATTTCATATTGTCTCTTCGTATAAGAAAAGCTTCAGTACATCAGATGGTCCCCCCTCAGAGTCCATCTGAATTAATTTTTACATTGCCATAGCCAGCGGCAGTGCTCCTGCCTTCATGGATTTTGCCATTTTGATTGTCTGGGACATTTGCTTTTGCACTTCGCCGATTCCGCGCGATTTGTGCAGATCATTGAAGTCGGAGAGACCTTGCTCTTTTTCAGCTTCATTGAATTTGGGGGTTGCCATCAGACCGCCTACGGCCTTGGCTGCTGCTTCGGCTTTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACGATTCCGCACAATGACAGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : NA // Array 1 17088-16704 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDSB01000032.1 Marinifilum sp. JC120 scaffold_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 17087 36 80.6 32 A.ATCTTT............................ CTAAGAAACCGATGATGGTAAGTTTATACCAG 17019 36 100.0 34 .................................... GTCATCTCAAACTCAGGATACGCCCACTCCATAT 16949 36 100.0 33 .................................... ATCAACATATAAGGCTTGAAGAATAGAATAACA 16880 36 97.2 35 ................C................... TCTCTTTTCTACTCATATTTTACCCGATCACTTCA 16809 36 100.0 34 .................................... GTTGAAAAATTGTACATATCTGCCTTAATCCTTC 16739 36 94.4 0 ................C..................A | ========== ====== ====== ====== ==================================== =================================== ================== 6 36 95.4 34 GTTGAACGATTCCGCATAATGACAGCGGATTGAAAC # Left flank : TTCCGGGGAGTGCGCCCCGCTGGATTATGAGGCCGGGGCTTCCATTGAGGTCTATACTGCCGGAGGCTTGGTCGGAATGGAGCCTGATGGAAAATATGATATTGAGATCCGCTTTAATACGCCGCTCCAGATCAGAGGTGGGGATAGTTCTAGCAGTACGACTTTTCATGAGCTTGTCAGCCGCTCGGTTAATCGGTTGCGGAGCATCAACCGTTGGTATCATACCGGATCAATGGGCCGTTTCTCCTCTGAGTTCTGGAAAATGGCCGAGAACATTCGCTCCGCTCCAAAGCTGCACTCTGTGCAGGCCGGACGCTATTCCGAAAGGCAGGGCGTTGGAATCGATCTTTCTGGCATGGCCGGGCTGGTGCGCTGCTATGGAGTGCCGGGGGAATACCTGCCGATACTTTACGGCGGCAGCCTGATCCACATAGGCAGTAAAACCTCTCACGGCTTAGGTAATTTTTCCGTGCATTGCTTGAAATAAGTATAAAATGGGG # Right flank : TGAGAAAGCCGCCCTTAATAGGACGGCTTTCTTTAGTCTGATCTTTTGGGAAAAAAGAAATTAATCCTCAGTCAACAACTCCACAGCCCCCTGAGAAAAATCAGGGCTCAAATGAGCATACCGCATGGTCATATTAATAGTCTTATGCCGCATGAGGGTCTTGATCCGGTAAATATCAACGCCGACAATTGCCAGCCATGATGCGAAAGTGTGGCGCAGGCTGTGGAATACTATTCGCTGACTTTTGGCTGTAGCAAATTTATTTAACTCTAATTCGTCTACAACGACCTTGAATTGTTTTGAAAGGTTTTCTTTCTTCTTGCCCCCGGAAAGGGGAGGGAAGATCAGCGCATCGGTAGATTCTTCCTTCCGGCGCATGAGCACATCAAGAGCTACTGAATTGAGAGGGATAGTCCCTCCCGGCTTTTGTCCGTTGCTGATGAGTCTCACTGTTAGCGATTTCCCATAAAAATTCACATCGTGCCATTCTACACGCTGGA # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:0, 3:3, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACGATTCCGCATAATGACAGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : NA // Array 2 18396-18150 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDSB01000032.1 Marinifilum sp. JC120 scaffold_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 18395 35 100.0 36 ................................... CAATTGTAAACGCTCCAAGTGCAATACTGCCCTTGA 18324 35 100.0 34 ................................... TTTTGAGGGGTGAGGAGTGTGACGCACGGGATAA 18255 35 100.0 36 ................................... TAAATCCGAATCCGCTGTCCTGCGATGAATGTGCCG 18184 35 94.3 0 ................................C.A | ========== ====== ====== ====== =================================== ==================================== ================== 4 35 98.6 36 GTCTAAATGGGCTTCGCCAATTGAGGCATTAAGAC # Left flank : CCCTGCTTAATTAAATATGAGCTATTGAAAAAGATTACCAAACATTTTGAGAAACGGATCATGCTTCCGTACTCGTTTACATCGCTGGAGAGTGCTGTCTGCCGCAGCACAATAATGCGACAGGTAAATTTTTATAAAAAGGCTATCCTTAAAGGTAATGAGTATAAATCTTTGAGAATTAGAAAATAAGCTTCAGATATTTAGTAGAAGTATTAATATTAAGGGGAGATAGCGTGTTTTCTTTTCAGAAAGATAGCCAAAATACTTGAGTGATTTCGATTTTGAACTGTGTTTTTTGTAACTGTTCAGGATTCTTGTTAAAAACAGCTATTTTGTGTAAAGTGAAAAATAATCGCTAGCGTAAGTTAGTGAATTCAAGGGGTTGAAGCCCATTTTAGGCCGTTTTTCAGGTGTAAAAAAGTCGAAAAAAAGCTCAAAATCAGTCGCCAGCGTTTTTGCCCTTCTTAACCCGCATGGTTAAAGGGCTCCCAGAGGGTGCT # Right flank : TACATATGAAATTAGACTCAAACGCTATGCACATAGAATCTTATAGTCCGGTACTAGGCACGGAGATGCGCCGTTTTCGGTTGCATTTTAAAAGTCCGGCTGGCTGGCCTTTTTCCGTGCGCGAGGCGGACGGCAATTATTCATTGCTGGTCAGCCGGGTACGTTCTCGGCTGGGGCTACTGCTGAAGAAGCGTTCCTGCTATGCGTTTGGTTATGCTGATTTTCGCAACCGGGTTTGTGCGGATTGCCCGGAGGGAACGGGGTGTCTTTATCCCCGTTTTTTTATGCCTACCTTTGAGATTCGGGGCAAAGTGAATGATATTTCGCCTCCCTTTGTTTTTCAGTTGGCAGAGAACGGCCCGGAGCAAAAGGGAAAACAGCCGTGCAGGCTGGACTTGAATATTTTCGGCAATGGGGTGGAGCTGGTGCGGTTCATTGTGCCGGCTTTGTGCGAGGTGCTGGATGAGCTTTATTTTCCTGAAGTCGGTTCCGCATGGTGG # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAAATGGGCTTCGCCAATTGAGGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //