Array 1 43085-42249 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDJL01000010.1 Carboxydothermus islandicus strain SET IS-9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 43084 30 100.0 37 .............................. TTTGGAGAACCTATAAAGTTTAATGTTCCTTTTTCCC 43017 30 100.0 36 .............................. TAATAAAGCATGATAAGACTTACCAGAACCGACAGA 42951 30 100.0 37 .............................. GTCTATCATTCTATCATCTTGTGCAATCATAATTACA 42884 30 100.0 37 .............................. TTAGATACTTCTTCTAATAATACTTCTTCTGATACTT 42817 30 100.0 36 .............................. ATTAAGTTCAGTCAGAAGGATATTAAGAAGGGTATT 42751 30 100.0 38 .............................. TAGTTTAACAAGGCTTTCGCTTACTACCCTTACTGTTC 42683 30 100.0 36 .............................. GTAATCGGCCACCAAATCCCCAATTACCCGCATCGG 42617 30 100.0 38 .............................. TGATGAAGAAGGTAATTCTTATTGGTTTGGCTTGGGAA 42549 30 100.0 35 .............................. TTATTTTTCTAAAATAATTCGTTGCCGATTTCTTC 42484 30 100.0 37 .............................. ACTTCTATATTGTCCGCTTTCTGTTCTTTTTCAAATT 42417 30 100.0 41 .............................. GATACTTCCACTTCAAATCCGGGTTTAATATCCCCTCTGAT 42346 30 93.3 37 ................A.......T..... TACGGGCATGGCTTACGCCATGGGCTTGACAAGGCAT 42279 30 90.0 0 ......................A..A...A | T [42252] ========== ====== ====== ====== ============================== ========================================= ================== 13 30 98.7 37 GTTTTAATCGAACCATTGTGGGGTGGAAAG # Left flank : AAAATAGAGATAATAAATTTGAATTTTTTGACCTGAAAAAAGTAGAAATAGATACTACTAAAGAAGAGCCGGTTATTACGATGGATGCTGATCAGACGATCTTTGCCCATGTGCATTTAAAAAATGGTGTGCATGAAAAATTAAAAGGCAAAGTGGAAGTACTGGAACAGCGGTATACGGAAGATAGTGGAGGCATAAAACGTTTTGGTAATAAAATTATTTTATACCCCAGTTTTATGCCAGGAAGCAAGGTTAAAGAAAAGATTGATTTTTTGCTAAAACCTGAAGGGATCTGGGAGGGATAACCAGTATTTCTGCCGGTAAAAAATCTTTTCTATTGCTTGCTATTTAGCAGGAGATAAAGAGATAAAGTCGAAATTAAAAAATATATTTGTAAAAAAGTCGTCGTTGCCCGGGGATTTTTGCATTATCGGAGGTCGACGACGATTTTAAGGACTTCACACCCCTGGAAGCCTTGTTTTTTAAGGCTTCCAGGATGG # Right flank : TAAATTAAAAAGTATTTTGAAGTTTTCTCATTTTCTGAAAAAACTTTACTTTTTCGGGGTTTTTTAATCAAAAAGTATTAAAAAAGAGGCTTCGGCTTATTCCGAAACCTCCTTTTTCATTACTATTATCTTGGCCAAAAGCTTTTAATTAACCTGCGGCTTATCGAAATAGCTAAAAAGATCTTAAGAATTTTAAGGATAGTACCCCCGAAGAACCTGATGCCCCTGGAAGGGTAAAAAGAATTTACCTGATAAGTATGTAGGTACAATTTGCTCATCTTCAGGGATAAAAATGCCCATTTTTCAAGGGTTCCAGTATTTTAACTGACAAAGTCAGGGGCTTCTTAATTAAGGTTGAACAATTTTAAGATTGTGAAGTATTACATCGTGATTTATTAATTTTAAAAGGGCGTAATCAAGCTTTTCTCCATGTTCCTTTAGCGTCATTTTAATTTCCGCAATTTCCTCTTTGATTTGCTGGTTGGAAATTTTAAGTTCGT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGAACCATTGTGGGGTGGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 54372-53337 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDJL01000010.1 Carboxydothermus islandicus strain SET IS-9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================== ================== 54371 29 100.0 37 ............................. GCTTTACAAGAACAACCGTGACTATTATATGCTAAAG 54305 29 100.0 39 ............................. GTTTAAAAGTAACTGGACCGTGTACTCTACATCATCTAC 54237 29 100.0 43 ............................. TATTTATATCTGGTAAAAACATACTTCCTCCTCCTGCCCGCCG 54165 29 100.0 38 ............................. TGTACGGCTTTACAACAAGTATTTACCGGAGGTTGACG 54098 29 100.0 38 ............................. TAAAAAGAAGTAAATTTAATCTTAGCGGAAGTAAAAGA 54031 29 100.0 38 ............................. TGCTTTATTAGCCAGAAACTTACTCAAAGCAATCCTGA 53964 29 100.0 38 ............................. TAAAAAGAAGTAAATTTAATCTTAGCGGAAGTAAAAGA 53897 29 100.0 37 ............................. TCTATGAGATATTGCTGCTTCTTTTCGCCCAGTAAAG 53831 29 100.0 38 ............................. TGTTTCACCTGCCCGGTTGCGGGAGACGATTATCTCCG 53764 29 100.0 40 ............................. TTAATAAAGTATGCGGTCAAACAGGGACGCAAACAAGCCA 53695 29 100.0 38 ............................. TCTAAAAGCCAGATCAAGGCTTCTCTGTTCAAGAATAA 53628 29 96.6 38 ....................A........ TTCTGGTTTGTAACGGCAAACCGGCAGAAGCCTTTGAC 53561 29 100.0 37 ............................. TCAATAATTATTGAAATACTTACATACGACAAAATTC 53495 29 100.0 39 ............................. GGCAATATTTACAACTTTAGATTTTCTCTCGTTCCCGTA 53427 29 93.1 32 ..........................G.C GCTGCAAGAAGTAAGAAATGTCAGCTTTTGCT 53366 29 79.3 0 ........T........T......TAT.T | A [53341] ========== ====== ====== ====== ============================= =========================================== ================== 16 29 98.1 38 GTTTTAATCGAACCATTGTGGGGTGGAAA # Left flank : CCATAAACACATTAGCATTTTAACCTTGAATTTTAATTTTGCTTACCCACAAAAAATAGAAAAAATAAGAAGTGTTCAAACGGGTGCATTGCCCAAAAAATAGAACCGGCTGTTTTGAGGCAGCCGGTTAAAAATTTTTAAGCATGAAAGAATGGTTGGAAAGGTGGATAGAATAATATTTAAGCCTCCAGGCGAGACTTGGGGGTTTTAATTTTCTGGATACGATGCCAAATAAAACGCATAATAGACAAATATATGGAAATACTTAAAATATGGTCTTATAACTTAACATTAACTCTAAAGTTACTAACTTTAAAGTTAGTAACTCTTTTTTGTAGGCTTAGCAGGAAAATTCAGGAGAAAGTCGAATTAAGTAGTAAATAATAAAATTAGAGAACAAAAAGTCGTCGCTGCCCGGGGATTTTTGCATTATCGGAGGTCGACGACGATTTCAAGGTCTTCACACCCTGGAAGCCTTGTTTTTTAAGGCTTTCAGGATG # Right flank : TCGCAGTTTTTGAGCAGGGAAGTATTTTACTTTCCCTGCTTTTAATTTTTGGGCAGTATTTTCTGCCGCAAAAAATTTCTGTAAATTTAAAATGAAATTTGGCAAAAAAAGCGAAATAAAAGAGGAATTTCCTTAAATATGGAGAATAATGTAAATTATAATTATTAAGAAAAAATACTATTAAATATTTACCGGCTGCAGAAAAGCGGGGTAGTGTTAATGGTAAAACCACACATAGCTCAAGGAAGCAATCTGGCAGGGGCATTTTCAATTTTTATTTACCCTTTTTTCTTTTCCCAGGATAATTATCCGGAAGTCCTTCAGAGGGTCTTGGACGACCCGGTTTGGAGTCTGGATATTACAGATCTTGATGATGATAAAGATTGGAGACACTTACGTTATTTTTTTCCTTATGTGCGAAAATTTCTTTTTCCTACTGCAGGTCTTGCCCTTGAAAATTTACTTGCCTTTCCTCCGGAGAAACTTAAACTTTCCAGCGA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGAACCATTGTGGGGTGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 15980-9571 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDJL01000003.1 Carboxydothermus islandicus strain SET IS-9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 15979 30 100.0 37 .............................. GGTGGTAGTAAGTTGATAACTACTCAATATCAAAGTG 15912 30 100.0 35 .............................. GCTCCTGTTGAGAAATAAATTGTTCCTGACCCTGC 15847 30 100.0 37 .............................. TTGCGATATAAATTCTTCCATAAACTCCTGCCAAAGG 15780 30 100.0 37 .............................. AGTGTTGGTTGAAGGGTCATATTCTTCATTAGTAGTA 15713 30 100.0 36 .............................. GCCAATTCGTTCTATCGCCTGCTTGGCGATTGCTGC 15647 30 100.0 38 .............................. AGGTTTTCGGAGGCTGGCCGCGCGGTCGTCCGGGAGGC 15579 30 100.0 38 .............................. TTTATGCCGTTGTGGCCACGGCAACCAGTGAAGCATTA 15511 30 100.0 40 .............................. GCATATAACGACCAATACGATTACATTCCTGGGCGAGATG 15441 30 100.0 36 .............................. ACGACAACAGTGCCAACAGTCCACTTCATCCACGTT 15375 30 100.0 37 .............................. TTTCTTTTTGTGTTTCTGTTATCTGTAAAAATCCTTC 15308 30 100.0 39 .............................. TCTTTTAAAATAATGTTTACTGCTGTTGTTTTTGCCAGA 15239 30 100.0 36 .............................. TTTGTTTTTCTGCCCACGCTTTTTGTCCCGGTGTTC 15173 30 100.0 39 .............................. AATCCAGAATTCAGTAAGTCTTTCGGTATCAATATAATC 15104 30 100.0 39 .............................. GTAAACCGTTTAAATCGGTATCGGCAAAGCCCACGTTAT 15035 30 100.0 37 .............................. TGATTTATTTTGTTACCGGAAGGGATTGAATCCCTTC 14968 30 100.0 36 .............................. TTGTTATAATAATCAATCATTGTTTTGTAAATTAAT 14902 30 100.0 37 .............................. TCTGCGAATTTGCCTGGGACGGCGAGGGAATATGCCC 14835 30 100.0 37 .............................. GTAGATACAGGAGCCCTGCGCAATTCCATCACGGTTG 14768 30 100.0 38 .............................. CTTGCGGCGCATTTCCATCAGACTGGAGTTCACCCAAG 14700 30 100.0 37 .............................. TATGACGACGCAGCGACATATTCAGGGACATTGCAAG 14633 30 100.0 38 .............................. TGGACTATTTTTAGGTGGAGCTTTGGGATTTATGCTTG 14565 30 100.0 36 .............................. TGGCGCTATACCTATCTCAATCATTAAAGGTTCCTC 14499 30 100.0 38 .............................. TAAATTCCGGATTGAAAATCTTGAACAAGCAAGCTGGG 14431 30 100.0 36 .............................. TCCATTTCTACTATTCTTCGGGTATTAAACTTCTTT 14365 30 100.0 37 .............................. TTTTAGAGTGGGAGGATGAAAAAATGCTGGTAACTGT 14298 30 100.0 38 .............................. TGAAAATTTATTACGGTAAAGGCGCTATGTATGCGGAA 14230 30 100.0 40 .............................. TTTTTTGTCATAAGCCGCCTGTTCTTTTGTTTTCTCATGA 14160 30 100.0 36 .............................. TAAAATACTCGCAGTTGCACTTATCCACTACGAAGC 14094 30 100.0 37 .............................. ATTTTCGTCAGATATCTTTCTCTTTTTTTGTCGTAAG 14027 30 100.0 35 .............................. AAAACTTCAACATTTTCTGGACTTCGGAAACCTCA 13962 30 100.0 38 .............................. CGAACAATTTGCGGTTGTTCTCGTATAACGTTAGCCTG 13894 30 100.0 35 .............................. TTCCTCCTTACAAAAACTACATGATACTTCTCTAA 13829 30 100.0 37 .............................. ATGCTAGAAAGAATTGTAATTCAAAAATATTACTTTT 13762 30 100.0 36 .............................. AATTCTTTGGCCTCTTTGTAGGTTATATATTTAACC 13696 30 100.0 40 .............................. GTTCATAGCCTCACCACCTCAAAATCAACTACCCATACCA 13626 30 100.0 39 .............................. CTCTGGGTAGTGCGGGATGCACTACCTGGGGCGGTTTTT 13557 30 100.0 38 .............................. TTTTGCCCCATACAACTACATCGAAGAAATCCGCTTCG 13489 30 100.0 36 .............................. TAAACTTAAATTTCGGCTTTATTTCGAATTGCGTTT 13423 30 100.0 36 .............................. TAAACTTAAATTTCGGCTTTATTTCGAATTGCGTTT 13357 30 100.0 36 .............................. TACATTACAGGGGTTGTGGCAGCTTGGTTTGAGAAG 13291 30 100.0 37 .............................. GAAACTGTGGATGGCGGTAATAGCGGCAATAGTAGCC 13224 30 100.0 37 .............................. ATAAGAAGGTCAGAGGCAGGCTGACGTTGCAGGACAT 13157 30 100.0 37 .............................. TTGATAGGTCTTGACTGCATTTTCTGTATTAGGGCCA 13090 30 100.0 40 .............................. TGAATTCATACGTGAGGTAACAGATCGGCTGGCGCGAATT 13020 30 100.0 38 .............................. CGCGACACTTCTCCTGAAAGCCGGTATTCACCCCAAAA 12952 30 100.0 38 .............................. GTAATAATGGTTTTAGTTGGCGTCTTTATGATTTAGCG 12884 30 100.0 38 .............................. TCGCTTCTGCAACATTATCTTGAACAAGACGGCTTCTT 12816 30 100.0 39 .............................. ATACAATGAACCCCTGGGATTGGGTCAGGTATTGGTTGA 12747 30 100.0 38 .............................. TCGCTTCTGCAACATTATCTTGAACAAGACGGCTTCTT 12679 30 100.0 36 .............................. GTACTACTATCTTCCACCCCTCCGTTTTTGCCACCT 12613 30 100.0 37 .............................. AATCTTATGATGCACTATATCCCCGGGTTTGCCGCAT 12546 30 100.0 38 .............................. GCGAAAAGGGTTGAACTTATTCAGACAGTTAGAACCGG 12478 30 100.0 38 .............................. AGGGGAAGTAGCAATGAAACCCTGGGCTGAGAAGTTTT 12410 30 100.0 36 .............................. TTCATAAAATAACTTAAAACTTTTAGCAATTGCTTC 12344 30 100.0 37 .............................. CGTAAAGACGACCAGCAGTACCCGCGACGGGCTTATT 12277 30 100.0 36 .............................. CAAGAATGGGGTAGGCATTGGAACGGCGGTGATTAT 12211 30 100.0 37 .............................. GTTTATTGTTTAACCCAAGCGGTTATTCTAGATGATA 12144 30 100.0 36 .............................. ATGGGGCCGAGGAACGTATTAGCTGCGTCGGAGTTA 12078 30 100.0 37 .............................. GCAGCTCAGCTACCTCCTGGGCAATTCGCATAAACCT 12011 30 100.0 36 .............................. CTTCTGCCCCTGCTTGTCCTCGTATGAACGGCTTCG 11945 30 100.0 40 .............................. GTAAAACTGGACTTAGCTTTCCAAAAACAACATCAAGATA 11875 30 100.0 37 .............................. TTTCGTACCCAGATGCAGGAGGTACTTCAACAATAAC 11808 30 100.0 36 .............................. ATACTCATAGAAGGCATGGAAAAACGCTTCCCCAAC 11742 30 100.0 37 .............................. GCAGGAAGACAAAAGATTGAGCAGGTTAGGAATACCC 11675 30 100.0 37 .............................. TCAGTATGCGCCAGCTGAGGGTTTGCCGAACCAGCTC 11608 30 100.0 37 .............................. GCCGTGTCGGTATTAGAAATTAGCTTCTGCCCTTACC 11541 30 100.0 38 .............................. TAAAAACGGGAACTCCTGCAAGTAAGCCTCAAACTTAA 11473 30 100.0 38 .............................. TCGTAAAATTTTCTCATTTTTCATTCCCCCTTTAGTTA 11405 30 100.0 36 .............................. GAGTAATTAAAACTGCTTCTCCGGTTAATCCGGATG 11339 30 100.0 37 .............................. AACTTAAGAAAGCTGTGAAAGTGGTTGGGAATGTAGC 11272 30 100.0 37 .............................. GCCTTTGCAGTGACCTTTGAATAGCAATTGTCCCTTC 11205 30 100.0 38 .............................. AAGCTTTCTAAGATAGAAAAAGAATTGGGTCATGTAGA 11137 30 100.0 36 .............................. AATAAAGGTGAAACTGTAAATTACTATTTGGGATGG 11071 30 100.0 37 .............................. GCCTTTTACTTTGCGAATATTTTAAAAAAGGTGTTGA 11004 30 96.7 35 ............T................. GCCTAACGGCCGCCCTTGACAACGGCCGGCCGGTG 10939 30 100.0 36 .............................. GAGTTGAAAGAGAACGACGAGAAGAGTGCTTGAGTG 10873 30 100.0 38 .............................. TTTGCAGTAAATGTTACTATTGTCAAAATAAACGCAAA 10805 30 100.0 38 .............................. CACTTTCACCTGAATGAGAGAGGCCATTTCGTGGTTAA 10737 30 100.0 38 .............................. ACTGAGTTATCCAGTTTTGCAAACTGGATTAAGTCTTT 10669 30 100.0 36 .............................. CTCGATGATACGAATAACCCGCCTACTCCATCTAAA 10603 30 100.0 36 .............................. TTGCTGAAATTTTAGAAGCGTTCTCCAGGTAGTCCC 10537 30 100.0 36 .............................. GTCAGCAAATGGAAGGTGCTGAAATTGCGTCTGAAC 10471 30 100.0 35 .............................. GCATCTTTTAATGCGCCATAGAAAATAGGTGCAAC 10406 30 100.0 39 .............................. TGAAGAGCAGGAGCGGGCCGGGTAGGGTTGCCTTGTCAA 10337 30 100.0 36 .............................. GCGAATAAGCTATATCGAAAGGTACGGAGCTTGCGG 10271 30 100.0 36 .............................. TTTCTCGTCAACTTCGTATTTCTTCTTCTCAACGAA 10205 30 100.0 38 .............................. GATGGTAAGGAGCACCAAGCAATAAAGCCAGGTCCTCG 10137 30 100.0 37 .............................. TAAAACATACTCTAATCTTGTCCAATCAATTAATTTT 10070 30 100.0 37 .............................. TTGTCAAGGGCAAGCCGGAAAGCCGAGCGACGGGAGG 10003 30 100.0 38 .............................. CTTCCTACAATTTGGGCAAAACTTAGCGCCCTCAGGTA 9935 30 100.0 37 .............................. AACGCTTACTAATTTTTGGTGCTTCCGGTTCAGCATA 9868 30 100.0 36 .............................. TATTAAATATCCTCATAGTATCGTAACGGTTAGCAA 9802 30 100.0 37 .............................. CCATATTACCGAAGGAAACCTCGAACAGGTTTTCGCT 9735 30 100.0 38 .............................. CTCCGCAGTTTTGGGATGCTTTGGGTAATTACCTTATC 9667 30 100.0 37 .............................. ATTGGTTTATCCGGATGTTTCGTGATTATGGTATACG 9600 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ======================================== ================== 96 30 99.9 37 GTTTTAATAGAACCATTGTGGGATGGAAAT # Left flank : AATAAAATTAGAAGCTTATCGATTGATAAAACATTTAATTGGGGATGAAAACTACCGGGGATTCAGAGCGTGGTGGTAAGATGTATGTTATTATCGTTTACGATATTGGGGAAAAAAGAGTAGCCAAGGTGTGTAAGTTTTTAAGAAAATACCTTAACTGGGTGCAAAATTCTGTGTTTGAAGGGAACTTAACCGAAAGTCAGTTTGAAAAAGTAAAATATGGGCTAAAAAAATTAATTTGTGAAGAGGAAGATGCAGTGCTGTACTACGTTTTTTCAACTCCCAAGTGGGTGGAAAGGGGAATTTTAGGTAAGGAGAAAAATCCGATAAGTGATTTTTTGTAAAAAAGAGCAGGAAAATTCGGAATAAAAGCGAATAATAAGTGGCAAAGGAATAAAAAAGTCGTCGCTGCCCGGGGTTTTTTGCACTATCGGAGGTCGACGATGATTTTAAGGTTTTCACCTCCCTGAAGGCCTTATTTTTTAAGGCTTTCAGGATGG # Right flank : ATAGGGCAGGCATTTTAGTACCATTCAGGACATACAGGGTCTTGAAATTTTTACGAAAAAGATGGTGAAACGATGGCTGTCAAATGCCGTATGTTTACTCGCCGTTATGTAATTTACGAACTTGACCGAGCCCTTTGGTAAGTTTAAAGGAAAATAATTTAAAAAAATTATGCGGGAGATTTTAAAATATAAGGGTGATGTTTTTATGAATTTTAAAATTGTGGTGGAGACTTTGCCGGTCGTAATTTTAACCATGGGAAAGGGAGAAAGGGTTTTTACGCAGGCTGGTGGCATGGGTGGACCGAGGCCATGTAGCAATGTTTGAGCCTACTGTTACCTTTGAGATTGAAATGGTAAAAGGGTTTAGTAATATCCTGTTTGGCGGAGAAGGATTGTTTCTTGCTACTTTGAAGGGGCCGGGCAAGGTATGGCTCCAATCTCTGCCAATAGAAAATCTGGCAGCAAGGCTTATCCCTTATCTTCCTGCTTCGAAAGGAGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATAGAACCATTGTGGGATGGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //