Array 1 74876-77406 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJLK01000005.1 Lactobacillus delbrueckii subsp. lactis strain NBRC 3376 sequence05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 74876 33 100.0 38 ................................. AATCGGCCTGCAGGAGGGCGTTTTGGCCAGTTGACCCG 74947 33 100.0 33 ................................. AATCCGTCGCGCTTGATTACTAAGTCAACCGCT 75013 33 100.0 34 ................................. TGGCTACCACCGGCCTTAGGAAAGGCGAAGCACT 75080 33 100.0 35 ................................. CGGACTTGGCCCTTAATTAACTCCTCTGCGCTACC 75148 33 100.0 34 ................................. ATCGGGTCATTTGCACCGTAAAAGTAAAAAGCTG 75215 33 100.0 33 ................................. TTAACCTCATCGACAAACTGGTCGTGCGTCCGG 75281 33 100.0 33 ................................. ACGGTCAAGGTCTACGGCCCTGAAGCGAGGGTT 75347 33 100.0 33 ................................. TGTAGAAAGCAAAAAGTGGATACTTTAAGCCAG 75413 33 100.0 35 ................................. TTTAAAGACATGGTCACCCAGGCAACTGAATCCTT 75481 33 100.0 33 ................................. ACAGTGTCCTCCGGATCACCCCCACAGAAGTGA 75547 33 100.0 34 ................................. TGAGCTCTAACCCCGTTTCCAGCTCTACGTAGAG 75614 33 100.0 34 ................................. CCAGCAGACCAAGGAAATCTTTAACTCAGTTGGC 75681 33 100.0 38 ................................. ATTTACCGCCCAAACAGCCAACTTGCCAATTACATCAA 75752 33 100.0 38 ................................. AATCACCCCTTAATGAAGTAGACACCGGACTTGTCAGC 75823 33 100.0 35 ................................. ACTGTCACACCGATCGACTGGGGTTACTGGGGTGA 75891 33 100.0 35 ................................. TTCCAGGCCCCGTAAGCAAGCCTTAGTTCGGGCTT 75959 33 100.0 35 ................................. CATAACCGTGTTTCCACTGCTTAGACTCTCGCCTA 76027 33 100.0 35 ................................. ATGTCAGTGATGTATTTAGCATGATTGACCGTTAC 76095 33 100.0 35 ................................. AAACTTTACTCCAGGATTATGACCTGGAATGCGAC 76163 33 100.0 38 ................................. ACATGAAACAAATATGTCTGGTCAAAAAGCAGAACCAG 76234 33 100.0 33 ................................. TGGCATGTCCATTGGGGTTGGAACCAAGGAGAA 76300 33 100.0 33 ................................. TCTACCTGGGTGATGTAGGAAGATCTGGTTTGA 76366 33 100.0 35 ................................. AACATCAAAAACGGCAGAAATGTAAAAGTTCCGGT 76434 33 100.0 34 ................................. TCTTGCTCGGTGCGGCTGTCCTGGTCGTAGCTGT 76501 33 100.0 37 ................................. CAAACGTAAGCAGCATTGTCTGAAAAGTAGAGGTCGC 76571 33 100.0 34 ................................. GGCTACGGCGACACGGAAGACGCGTCACAGCCTG 76638 33 100.0 33 ................................. TGTGGATCCTTAGCGCCATCTACCTGAATAGCG 76704 33 100.0 33 ................................. TTTACCACCGTCACGCTTTTCTTGACCTTTTTG 76770 33 100.0 36 ................................. AACTACTACTACCAGCACCCAAACAAAAGACTTTTT 76839 33 100.0 33 ................................. CATGCCGCGAGCTCAGCCTTTGAGGACTCACGT 76905 33 100.0 33 ................................. TGCTGCTCCAGGCTGAGACGCGTCTTCCGTGTC 76971 33 97.0 33 ....................T............ AGTTAAACAAACAGCCGACAGCCTCAACGCCTA 77037 33 100.0 38 ................................. GTTCTCCGTAGCCTGGCAAGGTGCCCAAGAATCTGTCC 77108 33 100.0 33 ................................. GTCTTTCTTTGTTGGGACGTGCAATTTGGTGAT 77174 33 100.0 34 ................................. ACTGCCGACCGCTGCCACGTAAACTGCGTCTTGA 77241 33 93.9 33 ..............................G.G GCTGAAGGGAAAGTAGCAGCAGAAAGAAGAAGC 77307 33 100.0 34 ................................. ATTTGCTGGTACAAAAGTAACAGAGTTACAACAA 77374 33 84.8 0 ..........A...AA....T......C..... | ========== ====== ====== ====== ================================= ====================================== ================== 38 33 99.4 35 GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Left flank : CGGATACCCTCCGTTTTTATGGAAGTAAGTGATTGTAGATGATGATGGTAATTGTCAGTTATGACGTGAATACTGAAACTGCTTCGGGAAAGAAGAGACTAAGAAATGTTTCCAAAATATGTAACGACTATGGCCAAAGAGTTCAAAATTCAGTATTTGAGTGTCTTGTAGATTCTACAAAGCTTGAGGAAATGAAGGAACGCTTACTAAAGGTATATGATGAAGAGTGCGACAGCTTGTACTTCTTCAATGTAGGCAAAAAATATGAGAACAAAGTTCAGTCTTATGGGTGTAAACAAGTATTAGACTTGGGAAAGCCAGTTGTCTTCTAATTATCTAGACAGTGCGAGTGTGAAGCTAACAGAATTAGGCAGAGGATTCGCACTGTTTTTGACTATTTTTTTGTAGTCTTGAATATAAAATTGCAGTTTTTTAATGCTTTTTATATTTTGTATGCCCAATATTTAGCTGTGAAAATGCTTTTTTAACTAAATGTTGCG # Right flank : TATCGCTTAGATATGTGGATGCTTGATGGTCAAATTCCACTAAAAGCACTCCCTCGCGGGGTGCTTTTTAATATTTTGCTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTATAAAAAAGCTGAGTCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAATAAACATATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCCGCCATCGACCTGGGCCAAATCGCCCTGCACGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCCCGGCAAGTTGCCCTAAATGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGTTCCAGCCTCAAGGCTGCCCGCCTGGCTGAAGCTCAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.40,-9.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //