Array 1 8442-9568 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCHW01000033.1 Pseudomonas aeruginosa strain GO69 NODE_33_length_48628_cov_27.460568, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8442 29 96.6 32 ............................A GCAGGATTTGGAGTCGGAGCGTTTACCTACAT 8503 29 100.0 32 ............................. GTGAACGATGCGAATCGGGCGGGGGTTTGGTC 8564 29 100.0 32 ............................. GCTTGGTAGATGCCTGGAACAAGTCGGTCAGC 8625 29 100.0 32 ............................. CGCGCTGTCCTCGGCCTGGACTGGACCATCGA 8686 29 100.0 32 ............................. TGGGCGAACGACGGCAGCGTCACCCAGGCGCA 8747 29 100.0 32 ............................. ACAGGGACGTTCTCCGCGAGCTGGCCATCGAC 8808 29 100.0 32 ............................. GCAGAGCGGATTGCTGCCCGCTTTGTCGGCAC 8869 29 100.0 32 ............................. GGGGTGGTAGCACCGGACTCGCGGATCTTGAA 8930 29 100.0 32 ............................. GCGTACATGACTGAGGGAGAGTCCACGGACCT 8991 29 100.0 32 ............................. TCATATAGCTTGTATTTTTCCTTGCTATGAGA 9052 29 100.0 32 ............................. AAAAACGACGGCATTCACTACGCGCGCCAGGC 9113 29 100.0 32 ............................. GCGTTCATTTCCCAGGACGTGGACCAGCTGCG 9174 29 100.0 32 ............................. GCCCCAAAAAGCGTTGGCGTCATCGGCTGGCT 9235 29 100.0 32 ............................. TTCATGAACGGCAGAACGTTGAGCGCCGATTT 9296 29 100.0 32 ............................. GTTGTTCTAGAGTCCGTTCAGGAGATGCTTCT 9357 29 100.0 32 ............................. AGGTATTCCTTGCCCTTGGCCAGGAGCACGCC 9418 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 9479 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 9540 28 79.3 0 A..........A..C..-.....A....T | C [9544] ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.2 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACCGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTTGCATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : TGTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCATGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTAATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 18741-20479 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCHW01000033.1 Pseudomonas aeruginosa strain GO69 NODE_33_length_48628_cov_27.460568, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 18741 29 100.0 32 ............................. GGATTGCTTCGCCCATCTGCCGGGCCTTGCGA 18802 29 100.0 32 ............................. ACCGGATGCAGTCTTAATCCCTTTTTGCGTCG 18863 29 96.6 33 ............................A GTTATGCTGGTGCTGTCATAGATCATGTCGAAC 18925 29 100.0 32 ............................. CTCTACGACGAGAAGTTTGGCCTGTCGCTACT 18986 29 100.0 32 ............................. TCTATGGGAGGTGGGGAGTGAACGAGACCGTA 19047 29 100.0 32 ............................. TTGAGGGCAAACGACGTTTTGCCCATCGAGGG 19108 29 100.0 32 ............................. TAACGGCCCGCCCCTTCACGCGACCTCCCGCG 19169 29 100.0 32 ............................. CCAAGAAAGAACGCCGAAAGGCCGTTAGGAAA 19230 29 100.0 32 ............................. ACGTTGAGTACGTCGGCGCCGTACTTTTCGTC 19291 29 100.0 32 ............................. CGGGCCTTGGCAGCGAGCAGGGCCTTCATGCC 19352 29 100.0 32 ............................. CGCACTGATGCCAGAGCCGGAGTCGCGACCGG 19413 29 100.0 32 ............................. TCGGCCATCACTGGCAAGGTGCGCGAAGGCGT 19474 29 100.0 32 ............................. GCGCTTCACGGAGACGGCCTGCTGTTCCCTGC 19535 29 100.0 32 ............................. TTCAGCAGGGCGTCAGGGATGGCATCGTGTCC 19596 29 100.0 32 ............................. GCTACTGTCGAAGCCGGCACCACTCTGGACGC 19657 29 100.0 32 ............................. GCCGGATTCCGCTGCCGGGCTACATCATCCCG 19718 29 100.0 33 ............................. CGGGGCATGACTTCAACCCACCCCCAGCCCTCC 19780 29 100.0 32 ............................. TCGCACTTCCAGCCATGGCTGGACAAAGCGGC 19841 29 100.0 32 ............................. GCAGTCAAGGCTGCCGGCGGCCAGTCCGCCCT 19902 29 100.0 32 ............................. GCCAGCAGGGATGCCAGCACGCAGCCAGTCGC 19963 29 100.0 32 ............................. CAGTGACGGCAGCAGACGCGGCGATGCTGGAT 20024 29 100.0 32 ............................. TCGGTAGACGCACAGATGGTCGAGCAACTTCG 20085 29 100.0 32 ............................. GCGCAGGGCAAAGCCAAGGTCACCGCCGGCAC 20146 29 96.6 32 ...........A................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 20207 29 96.6 32 ...........A................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 20268 29 96.6 32 ...........A................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 20329 29 96.6 32 ...........A................. ATGTAGCTGTTACGCGGTCCCGCGGTGCTGAG 20390 29 96.6 32 ...........A................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 20451 29 93.1 0 ........T..A................. | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.1 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : GTGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGATAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //