Array 1 66687-64829 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGUCI010000010.1 Lactobacillus acidophilus strain LA-G80 contig10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 66686 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 66625 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 66564 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 66503 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 66442 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 66381 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 66320 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 66259 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 66198 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 66137 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 66076 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 66015 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 65954 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 65893 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 65832 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 65771 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 65709 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAACACTTGTA 65648 27 100.0 34 ........................... TATATACAGAGTTGTTTGTTTCAAAAATTGCCGA 65587 27 100.0 34 ........................... TAAATCGTTGAAGCTTATTGTCCGCTTTAACGTA 65526 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 65465 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 65404 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 65343 27 96.3 34 ...........G............... CGGAATGTATGATAAAAATTGGCTATTTGCCGAA 65282 27 100.0 34 ........................... TATATACATCGTTGTTTGTGTCAAAAATTGCCGA 65221 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 65160 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 65099 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 65038 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 64977 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 64916 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 64855 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 31 27 98.7 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //