Array 1 363-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQXO01000090.1 Caloranaerobacter azorensis DSM 13643, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 362 29 100.0 38 ............................. AAAGACAAATTAGCTATATTTATAAGTTTTCATTATAA 295 29 100.0 37 ............................. TAGACTAGAAAGGAGATGATAAGATGGATAGAACAAA 229 29 100.0 37 ............................. TCTTTAAGTCGAATTTCACTACCAACATACCTAGAAA 163 29 100.0 35 ............................. TTCTTTTTTTTAATTTATTGAGAAGTTTAAAAGTA 99 29 100.0 38 ............................. CTAGAAAATTAATTAAAAGTAATATATATAAACCAAAA 32 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 6 29 100.0 37 GTTTTATATTAACTATGTGGAATGTAAAG # Left flank : GGTATTGATAAAAGTTTTGATGATATTTTTTTATAATTCATAAGAAATTATAATAAAATATTATATTTTAAAGATTTAATATCGATTTCATTGAAACTTTATCTGGAATGTTTACATACCAGAGTCATTATAAGCAGCATTAATTTGTGGATAATTTTGAATATAAATTCTGTAATGGATATAGCAAAATCTATTCTAAATTGTTTAAATCGAAGATTTTGTTTTAATTTTGTTTTAATATTTTATTTTAAACAAAATCATTTTTAGGATTTATTTAACCTGAAAATTTTATTTCTAATAGTTGGAAAGATTTTAAAGTTGCAGTAAAGCGGTTTTGATAAAAAAAGGTATAAATCTATTGAAATATCTTAAATAAAAGGCTTTAAATTTATATTACAAAAAACATTACTATAACTTTACTGCAAAAATACTAATCATAACTAGATTTAAGTATGTTGTAAGCCTTCAAACTTCTTATAGGCAGTTATTATAAAAATGGG # Right flank : GAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.77 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 9747-9906 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQXO01000082.1 Caloranaerobacter azorensis DSM 13643, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 9747 29 100.0 36 ............................. TATGTTAACTTTGATGAATTATCTAAAGTTTGGGGA 9812 29 100.0 37 ............................. CTTACGAGGCAAATTAATATCAAAATGAGGAATATGC 9878 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 3 29 100.0 42 GTTTTATATTAACTATGTGGAATGTAAAT # Left flank : GAATTCGAAGATTTTATATATAATTTTTAAACAGTATTATTAGGATTTTAAGAACGTTTTTTCAGTTTTGAAAAAAGTATATAATAATTAATCCAATTCTAAAAGTTTGATTTCTTAGTATAATAAAATTATAGGCATTTTTAAATTTTGGCAAATAATACATTTAATAGATTTATTTTTGAAATTATTTGTTTTAGAAGTTTTATTTCAATTGTAATTTTTAGTATAATAATAGAATAGATGGTTGTATTTTAGTTAATGAGTTTTTAGAAGTATTTTAAATTTTTTATTTACTATAATTAGAAAAATTTCACAGCTGCAGTAAAGTGGACTTTAATTAAAAAGTTGTGAATTCCATGAAATATCTTAATTAGAGGGCTTTAAGTTTATATTTTAGAAAACATTATTATAGCTTTACTGCAGAAATACATATTATGATTGAAATCAAATATATTGTAAGCCTTTAAATTTCCTATAAATAGTTATTAAAAAAATAGGGG # Right flank : TCTGT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 4781-4407 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQXO01000068.1 Caloranaerobacter azorensis DSM 13643, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 4780 30 100.0 43 .............................. AAATCTTCTGTCTTTTCTGTAGTAGTTGATACAAGCGAGTTAA 4707 30 100.0 39 .............................. TATTCATTTCCTTCTGTACTGCTTACACTCTTTAAAAAT 4638 30 100.0 35 .............................. ATATGTGGAAATGTTCTGCTAACCATATTGGGTCG 4573 30 100.0 36 .............................. AATTCAAACTCTTTTTCAGTTTCTTTATAATCATCG 4507 30 100.0 37 .............................. GCAAAAGGATCAGGGCTACCATTCTTTTTGTAGTATT 4440 30 90.0 0 .................G.......T...T | T,A,AG [4409,4413,4416] ========== ====== ====== ====== ============================== =========================================== ================== 6 30 98.3 38 GTTATTAGAGTACCTATAAGGAATTGAAAC # Left flank : CTGGTGGAGGACAGCCACATGTCAGTGCAAAAGATAGAATGACTAAAGATATAATGAAAGAAAGAGCGAAGGCTTTATATGATGAAGATAAAGCTAAAGAGATAAGAAAATCTCATGAAAATCCAATGATTAAGAAGATTTACAAGGAATTCTTAGGAGAACCTAATAGTCATAAAGCTCATGAATTACTTCATACTCATTATGTAGAAAGAAAGAATTATCCTGTAGATGAAGAAAACAAATATAAAGAATATTTTTGTGATTGCAAATAAATTTATAGCCCTAGCTGAATGCTAGGGTTATTTTTTTACGATTATTATGTCGTCGACCTTCAGTAGTGTAAAAACCCCTGGGGATCGACGACATTGTATTTTTTGTAAAGAATGTGTAAATTTCAATATATAGAACGGCGAACTCCTACTATATTAGTAGGAATTAATGTAAGAAATCAGTTAATTGACTAATATTCAGAAAAGTGGTATTATCAATATATGTAATGG # Right flank : AGAAAAAGAAAAATATATAAAAATAAGTTCCGTTTTAAACGGATCTTTTTTTATATATAAAAATATTTCCAGGGCAATGAAATGGCTATAATTAAATAATCATGAGTAAGAAATAACTGAAATAAAGCTAATATTATATTTCGAATTATTAAAAAATATTAAAATTTCTAACAAATTATATTACTTCATATTATCTTAATAATATAATTAATATTAAGAGAGTATATAAGAATAAAATTTTTCAAGTTATGTTTTTTTAATTACCTTAAGTAATCGAAGGGTTAAAAATCACCAAAAAATAACGAATGGAAAGGAGTATTAAAATGCAAAAGAGAATGTTGACACCGTCAGAAATAGCTCAAGCTACCATTAATGCAGGTATAAAAAAAGCTAATTTATCAGCTCTACAAATGATTTTATTGGGTATTTTTGCAGGTATTTTTATAGGTTTTGGAGCACAAGCAGATATTACTGTTATGCAAACGTTAAAGAATGTTGAT # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAGAGTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //