Array 1 27745-28109 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWEW01000048.1 Sulfobacillus thermosulfidooxidans ST strain strain ST Contig48, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 27745 30 100.0 40 .............................. CAATTAAAACGATATATTGATTCAAAACTTCCAACAGCGA 27815 30 100.0 39 .............................. GCAAATACCAAAATGGGCATTTTGTCGTCAGCTATCCGC 27884 30 100.0 36 .............................. GTAACCTTTACAACGTAAACGGTTTCATCATCGCTG 27950 30 100.0 36 .............................. CTTTGTGGCGTAAAGATTTTAAGAAAGGGGAATAAG 28016 30 100.0 34 .............................. CAAAATTGCATGAACGGAGTTCTCATAATCCTCA 28080 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 6 30 100.0 37 GTTCGTAGCCTACCTATGAGGAATTGAAAC # Left flank : CACGAGCGTGGTAATGGACGATTGTTGAACCAATTCGGTGATTACCTGAAGGCTGTGCTTGTAATCGGGCAATGAGGCATTAATAAAAGGGAATTCTAGACTTGATAAATAGTCGCCAACGAACAGAACGTTCTTATAGGTAAAGCTAATGCTGTCAAGGGTGTGCCCCGGAGTATGGAAGAACTGAAAGGGGCCGACGGTTTCGTGGTGGTGCACAGGATAGTGGATTTTTGCGAATGGTAAGGATCCTTGTTTCCACGGCCTGTCGACGTAGAATTCGGTATCGAAGTGTTCAAGTTGCCGGATGGCACGTTCTTCATTGTCGCGGTCCCACGCACTAGAGGTCATGACCGCATATTCCGGAAAATATGGAACCCCCGCGATGTGGTCAAAATGGGAGTGAGTCAGAATGAGCAGACGACTTCGCGAGGGAATTTCATAGGGCTTTAAAAAGCTACGAAGCGCTGCGATTTCACCAGGAATAAAACATTAGATAAACA # Right flank : CAGCGTTGGCGACCTCTAGATGGTGACGTAATGGATTTTAATGAGACTCCATCTGATATATGAAATAAGCTAAATGACCTTGTGATGAAACGGGCACAACGTCATTTAGCTTGATTTGCCGATATAAACAATGATTCTTCATATGATATAGTCGGAATCCCGATTTGTTAGTTGATAGCCAATGTTGTATGAAAGAAATATGACCCAAACGATGAGGAGAATGCGTACGGCAAGCCACCAAACGATTCGTACGGTAAACATGACTACTCGTAGGAGCCACAGAAACATTCGGATGGATAGTTTCAGTAACCCATACAAAATCGCGGCAGTGATCCAAAATACTTTGCTGTACCATGGCAGTCCCGATAATTCCTCCATGAGAATTTACCTCCTAACTAATTTGTGGTGGGAATCTGGTTGTCCCTTAATTCCCGGGTTCTCTTTTTGAGTTAGACACTACTTGGTTGTTCATGTAATTACGGCCAATAAAAGATCCCGTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 19220-21871 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI547115.1 Sulfobacillus thermosulfidooxidans ST strain strain ST Scaffold12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 19220 30 100.0 36 .............................. ATCGTCCATTTGATCATGATTACCATCTCCTCTTCT 19286 30 100.0 38 .............................. TGAAGACGGTGCAGATTCTCTATGCGGCCTATGATATA 19354 30 100.0 36 .............................. ACTGTATGGGGAATTTTCCTGCATCAGCTTTATCTA 19420 30 100.0 42 .............................. CACGCAACTCCTCCTTGACACCCTCCCCCCCAAATCGCGGGA 19492 30 100.0 34 .............................. CGGGGTTAACTGGGCAGTAAAAATCATGGTTTAA 19556 30 100.0 37 .............................. TTGGGAAAGAACACTGGGTGATATAAAATGAGTAGTG 19623 30 100.0 38 .............................. ATACACCTGTCGGCAAATACCGTCCATATTTCCGCAAA 19691 30 100.0 39 .............................. ATGCTACTTTGTTTAGCTTTTCCATGCGAGAATCGTTAC 19760 30 100.0 35 .............................. TCGGAGTTCCATAAAAATTTTTTATCGTTCGGGGG 19825 30 100.0 38 .............................. CCACATTTCTTAGAATTCTTACCCGCCTATCGTCGCTG 19893 30 100.0 36 .............................. TCAAGCATTCGCTTGTGCTGCTTTCTAGCAAGCACA 19959 30 100.0 34 .............................. CGAATCCCAGTCCCATACATGGACGTGATGCTAT 20023 30 100.0 38 .............................. TCAAAAATCCCCTTCCATTTTTTCGCACAAAGGTGTAA 20091 30 100.0 40 .............................. AAAGTATAGAATTGTGAGAAAATTTAAAAAACCGCCGGAT 20161 30 100.0 35 .............................. CGGTTTTGGTAACTAGGTGGTTAACTCTAGAAGAA 20226 30 100.0 36 .............................. TTATCATTGAATCTCCTGAGCTTGAATTGGGACTCG 20292 30 100.0 40 .............................. TGGTTAGCCACTCATTTTGGGGAGCGAGCAACGGAAAAAA 20362 30 100.0 38 .............................. CGACAAGAGGACGACTATCAATTCGCAGTGGGAGACGG 20430 30 100.0 39 .............................. ATTTTCATTTCCATGATGGTTATGAGCCTATAACCATCG 20499 30 100.0 40 .............................. GAAACCGGAAGGACGGCGCGTGGTGGGGGTCATTGATGAC 20569 30 100.0 36 .............................. ATGAATACCGAGAGGAAATTAAACAGGACGAAACGC 20635 30 100.0 39 .............................. CATTTACTCCTGTTTGCTTCACTGTTTGCTTCATCTTAC 20704 30 100.0 36 .............................. TTGAATTTACGGGTTGAGTTGTAGAGCTTGTGGGTA 20770 30 100.0 38 .............................. TCTCGACCGTCAACAACATACTTAACATAAAACCTTTT 20838 30 96.7 37 A............................. TTTTACCCGAAGTCGGGTATAAAAGCAAAGAAAAAAA 20905 30 100.0 34 .............................. CGTTCTATTACACAAAGATGTAATATAGAATCAA 20969 30 100.0 38 .............................. ACGTTAACCGAATGGCAACATCTTTATGGGTTTATAAA 21037 30 100.0 38 .............................. ACTTGCAAAGCCTTTAACTTTTCCCTGTTCTCTGTATC 21105 30 100.0 37 .............................. CTCGTTCGCGTGTTCCTTCACGCGAGCGATGGCCAAT 21172 30 100.0 35 .............................. TATATGGACACGCTGACAATTGTGTCCATAGCGGA 21237 30 100.0 36 .............................. TTTCATCTAGTGAAAAACCTTGTTCACCAGGGTAGA 21303 30 100.0 37 .............................. AGGAAGTGCCTAATAAAGCGGTTTTTGAAGAAGTTAA 21370 30 100.0 36 .............................. TCAGGATCACCGCACCCACGCCTTGCACCGCCCTCG 21436 30 100.0 37 .............................. CCCATATGCCACATGCCATGCTTCGCCGTCTTCGAGA 21503 30 100.0 36 .............................. TGGTCTTTCCTCGTAGAGCATAGGAACAGCAAATGA 21569 30 100.0 39 .............................. CTGGATCTCGATAGCGGGAGTGGGCCGCGTCAACTCTCG 21638 30 100.0 36 .............................. ACCATTCGTAATCCTTGGTGTTGAATGTGGCGTTCA 21704 30 96.7 42 ........T..................... ATGTCTTGTGAGGTCGCCCCCACAATAACGAAATCACGATCA 21776 30 100.0 36 .............................. CGCACAAATTTATACGGAATTCCCGACAAAACACGG 21842 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================== ================== 40 30 99.8 37 GTTTGTAGCCTACCTATGAGGAATTGAAAC # Left flank : CGTTTTGTGGAAATTACCTCGACGTCACCGGCAAAAATCTTTGGATTGTTTCCCAAAAAAGGCACTATTGCGGTGGGATCCGATGCGGATCTTGTCATATTCGATCCCGAAGGCACTATGCTCTGGAGTGAGAAAACCCATCATATGCGTGTCGATTACAATCCCTATGAGGGACGGGTAACCCAAGGAGAGATACGCTATGTGTATTCTCGCGGAGAGAAAATCGTGGACAACGGCCAATTTTTCGCGAAGCCAGGTCGCGGTCAATTTCTCGTCCGTAACCATTTCGTAAAACCTTAAGAAACAATATACATTTGCCAGATGTATCCCCATTTCTTGTCGTCGATCGCCAGTAGCGCAAAAACCCCCGGGGATCGACGACAATCCCAAAAATCCCGAAACGCTTATGTAGCAGAGGTTTCGGGATTTTTTCAGTTTAAACTTGCATTATTTTCCATTAAATCTCAGATTGACAATCCTTGCATAGAGCCGCAAAATGG # Right flank : CCTCGCTTCTACAATAGCGGTGTTAATCGATGATTCCATGGGAAATGTTTGCAGGTTGTTTTTGAAATAAACGGAGAGAACTTTTGGTCGATCTGGGGCGTTGTGCGCCATGACCGACGACAACATCTATGAGTTGATCCACCGAATTAATTGGGAATGTAATTGCGAGGGTTGATCGCTGAATGAAATACCATTGTCCACACATCGATCTTTGACCGCTCGGGATAACGGAAAGTAAGATGCGAACATCGACTTGCGTTTGATGCCCGCGGCACGATTGGTTACTGAATCGATTTTGTAGATGGTACTCGTCGGGTCTATCTTGCCATTATCTGCAAAATGGCGAGTTTTACATTCAATAACATGAAGCTTATTGTGGTATACGAAGACAACATCCAGTTCATTCTTCACGCGGCCATTAGTTATCTCAATATTCTTGAGGAGATTTTTGATCGGATATTGGATTTCTATCTGTCTCAGTAGCGAATAAACATAATGTT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 39823-42778 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI547115.1 Sulfobacillus thermosulfidooxidans ST strain strain ST Scaffold12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 39823 30 100.0 35 .............................. TTCCTCTCAGCCAAGCGATTACTTACGGTAATGGT 39888 30 100.0 36 .............................. TCTCACTAGCCATGGATGCTGGCCATCATCACGTGA 39954 30 100.0 36 .............................. CCCAAATTTTCCCCTGTTCCACATCAAAAATGTTGC 40020 30 100.0 36 .............................. GACAGTAGAAATGCTGCTGCGTGCCGGTATGCAGGG 40086 30 100.0 35 .............................. TTGCGATCCATGAGCAGCGTATCGCCGTTCAGCCA 40151 30 100.0 37 .............................. TCCCCACGGCTGCAATAGCTAAGCCTGAGACGCCAAA 40218 30 100.0 36 .............................. CCTTGTTCGTCTTTGCCCACTATTTGCAGCCGATTA 40284 30 100.0 36 .............................. AGCATTGACAAACTTGGCTAAAAGGTCATCTGATAA 40350 30 100.0 39 .............................. ATGGCATCGGTGTATACGTTACCGCATATAGATGTAAGC 40419 30 100.0 35 .............................. CGTGCAAGCACAAACATTTCTTCTTGGGACTCGCT 40484 30 100.0 37 .............................. CAAGGCTGCAATGCCTGCTGCAAATCCATTAAATCCC 40551 30 100.0 37 .............................. ATGATATGCATTCGCTATATAGGGTGCTGCTATTTTG 40618 30 100.0 40 .............................. ACGTCAAAGACCGTCACGGTTCGAAAGCCGACCACCGTGG 40688 30 100.0 35 .............................. GCGTGAAAAAGGTCTCGGTTTCGAGACCTCACACG 40753 30 100.0 41 .............................. GACCATATTGGTCTTTATCCGATTGATGGGATATATTGAAA 40824 30 100.0 38 .............................. ATCAAAGGTCGGTTGATTCCGGATCACCCGCATCTCAT 40892 30 100.0 35 .............................. TTTTTCTCATATCACTCACATGTGTAGTGATATGA 40957 30 100.0 36 .............................. TCTCTCGGATTCCAAGACAGAACAAACCCTCATAGC 41023 30 100.0 39 .............................. GCCATCCTCCGCGAGAATCATCCAGAATTATCTGATAAT 41092 30 100.0 35 .............................. CCCCTTGGGAAACATCCACTCAATCTGTCATCCGC 41157 30 100.0 34 .............................. GGATAAACGATGCAGAGACACATTATGTCTGCAT 41221 30 100.0 35 .............................. CAACACCAGGGCCATTCATAGCGGGTGAAGATAAG 41286 30 100.0 35 .............................. CGAATCCCAGTCCCATACATGGCCATGATGCCATG 41351 30 100.0 34 .............................. CTCGAACCATGGCGCATTTCTAGCCATGGTTCGT 41415 30 100.0 38 .............................. ATCACTCCTATTTTGGTTTTTTGTGGGCAATTTCCTTG 41483 30 100.0 37 .............................. ACTTCCGCTAAAAATGTACGGTTAGGCACTTCCTCAA 41550 30 100.0 36 .............................. TGAGCGAATTGGAAGCGAACGCAGAAGAAGTATCCC 41616 30 100.0 38 .............................. AAGAAAACGCGTTCGTCACAACCATCATCAATTCCCCT 41684 30 100.0 36 .............................. GGATGAGAGCAGAAAAAATTAATCTGGAATATGGTA 41750 30 100.0 38 .............................. TTCAAACTCAAAGCGGTAAATAATGCTGACCATAATTT 41818 30 100.0 36 .............................. TACACGCCCTCGACGGGATGGGGACACACCGCCCAG 41884 30 100.0 35 .............................. AATGGTGAGCCAATAAAATTTCCTAGCGGTAGCCT 41949 30 100.0 36 .............................. CATTCCAGTGAACCATGGATTCATCCCCCGCAGGAA 42015 30 100.0 40 .............................. CGTATCCCCATATTCAATCCGTAAACGAATACCGTGTTGC 42085 30 100.0 36 .............................. GCAGTCTCTAACTTTTCACAAACAACCCAACTACCT 42151 30 100.0 37 .............................. GGTTTCAAAATAGTAGTAGCAATACCGTAGCGGTCAA 42218 30 100.0 35 .............................. GGCATAAAAAAATGCCTAGCCATGATATATTGGCT 42283 30 100.0 37 .............................. TCAAGAATTCTAATGAGGGTGTCTATGATTTTCCCTG 42350 30 100.0 39 .............................. CTCCAACTATTATTGGCAAATCTTGGACGATAATGGCGA 42419 30 100.0 35 .............................. TTCATTCATGCAAGTGGATACGGAGAATGGAGTGA 42484 30 100.0 35 .............................. TATTATCCGCTACATGAGGACATAATTCAAGCGAT 42549 30 100.0 36 .............................. GGTCAAAATTTCTTGATCGGACATGGAGTCACCTTC 42615 30 100.0 37 .............................. ATACGGATTCGGCTGTCCCGCAGGCCCCGGATTCACC 42682 30 100.0 37 .............................. TGGTCATCCGAAGACGTACTGGTAGGCGTGTATGGAT 42749 30 90.0 0 ...........G....C..........G.. | ========== ====== ====== ====== ============================== ========================================= ================== 45 30 99.8 37 GTTTGTAGCCTACCTATGAGGAATTGAAAC # Left flank : ACTTTTTAGGCGATGAACGTTATGAACCTTTTGTCGCGCAATGGTAAAGGAGCGGAATAATGTTTGTGATTCTCGTTTACGATGCCGGAGTCAAGCGGGATCCCAAGATTCTCAAAACATGCCGTAAATATTTAAATTGGACTCAGAATTCCGTGTTTGAAGGCGAATTGACCGAGGGGAAACTCAAAAAATTACAACGTGAACTCGGGGACATTATTAACGCTAAAGAAGACTATATCGTTATTTATGTCTTGGCGAATCAGCGATATAATTCCCGAATTCGTCTCGGGAAGCCGAAAGGTGAAGAAGGATTTATTCTTTAGGACCCGGTGAATTTGTCGTCGATCGTCAGTAGCGCAAAAACCCCGGGGGATCGACGACAATCCCCAAACCCCCGAAAGCATTATGCAGTCCCCGTTCCGGGATTTTATCGTTAACAACTTCCAACTATTGCCATATAGTCTATGATTGACAATCCTGTCACAGAGCCGCAAAATGGG # Right flank : CATCGGTTGAATCAATCAAGGCTTGAACCCTAATCTTTCGGAAGCGGCATGAGGATGGAATCACGTGTTTAATACCATGGTTGAGACAAATACAATGCTCGCGTAGCGATCCGCTTGGCCCATGAGCATCGCGTGACTGTTCTCGTCCCTGTCCGATACGCAATGCCAAACAGGTCCCGCACACCGACGATTTCCGCAGTGTGTTGCGAGAAGAACCGGCTCGTCACTTCGCTCGTAGCAGCGTTTTTGCTCGGAGATCGAGCCTCTGACGTACTGCGGGGCGGCGAGCCGGCGCCGGCGAACTGGGACGCTCAGCCAATTCCGAGCGATAGCCTCGCCGCGGCGAGCGAAGCACGGAATGTCAGATAAGCGGCATGGTAATTTAACCAGATTACCTTTATGATGTGAAATATCATGCGACGAGAGGACCATTGTCTTCGCGGATAAACCGTATGGCAGAATGGATAAGGTAAATCTTCCTCGTGGTCGCACTTTGAATT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //